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MacroAPE 1083:Motif415: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;61788;0;0!02;61788;0;0;0!03;15697;26596;0;19495!04;0;37929;23859;0!05;0;61788;0;0!06;0;61788;0;0!07;0;0;0;61788 |macroape_1083_sample_pv...")
 
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788-110H5;0.594423!10792-110H9;0.263123!10765-110E9;0.329676!10829-111D1;0.313057!10830-111D2;0.575254!10831-111D3;0.233282!10832-111D4;0.315661!10833-111D5;0.423541!10764-110E8;0.404409!10770-110F5;0.283982!10399-106A3;0.466051!10400-106A4;0.403325!10405-106A9;0.373612!10834-111D6;0.378687!10835-111D7;0.527876!10836-111D8;0.613731!10837-111D9;0.558313!10699-109G6;0.365337!10802-111A1;0.244423!10796-110I4;0.548136!10010-101C1;0.690251!10810-111A9;0.276105!10421-106C7;0.424012!10708-109H6;0.478853!12235-129G3;0.656826!12236-129G4;0.92013!12237-129G5;0.590743!10167-103B5;0.535598!10151-102I7;0.440042!10428-106D5;0.454897!10795-110I3;0.574904!10805-111A4;0.648114!10052-101G7;0.968576!10189-103D9;0.311877!10589-108D4;0.357721!10425-106D2;0.833788!10427-106D4;0.769548!10702-109G9;0.884083!10432-106D9;0.651002!10496-107C1;0.526412!10718-109I7;0.427832!10011-101C2;0.391878!10053-101G8;0.236458!10686-109F2;0.798187!10084-102B3;0.658902!10012-101C3;0.482002!10085-102B4;0.419948!10482-107A5;0.341011!10419-106C5;0.555986!10080-102A8;0.650061!10760-110E4;0.270756!10709-109H7;0.989004!10710-109H8;0.943603!10703-109H1;0.924708!10719-109I8;0.98765!10642-109A3;0.884328!10177-103C6;0.906772!10164-103B2;0.376794!10173-103C2;0.497952!10166-103B4;0.264326!10083-102B2;0.503484!10188-103D8;0.384256!10552-107I3;0.413278!10553-107I4;0.541719!10013-101C4;0.136682!10536-107G5;0.268875!10618-108G6;0.227139!10423-106C9;0.518328!10785-110H2;0.477965!12238-129G6;0.545233!12239-129G7;0.837505!12240-129G8;0.312408!10416-106C2;0.166307!10801-110I9;0.582331!10766-110F1;0.404107!10824-111C5;0.753094!10825-111C6;0.67894!10826-111C7;0.661792!10454-106G4;0.67307!10409-106B4;0.703387!10638-108I8;0.568788!10636-108I6;0.855272!10513-107D9;0.879116!10420-106C6;0.529148!10082-102B1;0.952752!10014-101C5;0.531508!10070-101I7;0.346851!10452-106G2;0.563086!10453-106G3;0.659406!10449-106F8;0.464852!10042-101F6;0.302352!10069-101I6;0.328292!10193-103E4;0.215283!10631-108I1;0.34878!10438-106E6;0.527766!10488-107B2;0.436539!10196-103E7;0.772452!10071-101I8;0.22279!10071-101I8;0.430931!10041-101F5;0.3188!10451-106G1;0.592729!10450-106F9;0.622068!10604-108F1;0.83331!10605-108F2;0.790938!10606-108F3;0.831565!10603-108E9;0.688823!10497-107C2;0.943541!10448-106F7;0.488812!10643-109A4;0.696432!10426-106D3;0.627222!10431-106D8;0.643518!10197-103E8;0.945443!10443-106F2;0.272821!10815-111B5;0.49471!10816-111B6;0.900532!10817-111B7;0.762101!10015-101C6;0.971956!10410-106B5;0.159877!10054-101G9;0.593033!10758-110E2;0.496849!10711-109H9;0.430026!10040-101F4;0.62013!10470-106I2;0.487596!10415-106C1;0.591221!10198-103E9;0.879808!10614-108G2;0.582755!10612-108F9;0.630073!10549-107H9;0.364042!10615-108G3;0.26853!10487-107B1;0.840011!10433-106E1;0.740252!10688-109F4;0.698429!10444-106F3;0.463031!10444-106F3;0.773499!10485-107A8;0.735097!10413-106B8;0.666881!10175-103C4;0.588808!10161-103A8;0.223313!12131-128D7;0.347904!10624-108H3;0.997342!10712-109I1;0.330008!10205-103F7;0.584422!10206-103F8;0.423964!10207-103F9;0.374989!10050-101G5;0.541359!10051-101G6;0.415224!10016-101C7;0.312257!10046-101G1;0.298545!10778-110G4;0.27738!10633-108I3;0.869724!10818-111B8;0.563063!10819-111B9;0.0841099!10820-111C1;0.0806614!10484-107A7;0.103074!10808-111A7;0.303376!10169-103B7;0.920664!10153-102I9;0.324098!13425-144D5;0.430705!13433-144E4;0.858091!13437-144E8;0.792606!11904-125F5;0.96555!11905-125F6;0.766272!10039-101F3;0.777401!10791-110H8;0.493766!10017-101C8;0.824467!10045-101F9;0.4128!10509-107D5;0.579129!10839-111E2;0.415154!10692-109F8;0.926134!10079-102A7;0.288059!10078-102A6;0.421246!10721-110A1;0.196867!10569-108B2;0.764107!10570-108B3;0.99531!10571-108B4;0.794711!10647-109A8;0.92718!10752-110D5;0.448728!10782-110G8;0.708236!10726-110A6;0.521272!10018-101C9;0.521462!10086-102B5;0.532533!10182-103D2;0.678147!10165-103B3;0.394293!10499-107C4;0.445916!10408-106B3;0.745846!10019-101D1;0.60725!10068-101I5;0.35619!10075-102A3;0.42293!10077-102A5;0.307335!10727-110A7;0.741026!10775-110G1;0.661991!10412-106B7;0.643549!12231-129F8;0.870062!12232-129F9;0.293768!12233-129G1;0.480443!12234-129G2;0.348409!10414-106B9;0.282853!10170-103B8;0.494121!10183-103D3;0.417707!10150-102I6;0.339849!10174-103C3;0.404714!10155-103A2;0.309844!10038-101F2;0.387138!10838-111E1;0.430297!10759-110E3;0.769648!10514-107E1;0.509792!10465-106H6;0.524439!10691-109F7;0.818891!10843-111E6;0.493836!10844-111E7;0.816759!11747-123G1;0.821974!11748-123G2;0.579546!11749-123G3;0.586418!11750-123G4;0.961026!11751-123G5;0.811455!11840-124H4;0.751129!11752-123G6;0.913844!11753-123G7;0.307667!11754-123G8;0.797568!11755-123G9;0.551972!11756-123H1;0.423124!11833-124G6;0.747231!11760-123H5;0.505214!11836-124G9;0.685937!11758-123H3;0.592885!11835-124G8;0.579148!11762-123H7;0.894591!11838-124H2;0.782375!11757-123H2;0.855322!11759-123H4;0.918855!11761-123H6;0.734514!11842-124H6;0.768905!11837-124H1;0.858296!10568-108B1;0.976719!13230-141I8;0.448724!13231-141I9;0.661682!10696-109G3;0.620015!10493-107B7;0.653394!10494-107B8;0.896556!10850-111F4;0.387525!10851-111F5;0.826678!10852-111F6;0.393677!10853-111F7;0.466762!10854-111F8;0.541414!10855-111F9;0.20826!10856-111G1;0.832414!10847-111F1;0.680023!10846-111E9;0.969441!10848-111F2;0.712292!10845-111E8;0.909021!10857-111G2;0.676673!10858-111G3;0.84551!10156-103A3;0.646888!11901-125F2;0.393136!11902-125F3;0.744149!11903-125F4;0.508113!10689-109F5;0.507923!10648-109A9;0.310679!10784-110H1;0.808532!10744-110C6;0.695107!10772-110F7;0.359759!10474-106I6;0.472639!10600-108E6;0.409317!10684-109E9;0.766319!12226-129F3;0.530646!12227-129F4;0.989758!10508-107D4;0.828965!10539-107G8;0.729444!10607-108F4;0.766163!10555-107I6;0.72623!10774-110F9;0.696915!10637-108I7;0.917571!10663-109C6;0.14327!10728-110A8;0.278143!10729-110A9;0.366538!10430-106D7;0.400543!10730-110B1;0.211443!10813-111B3;0.590926!10812-111B2;0.318719!10037-101F1;0.722072!10172-103C1;0.4729!10163-103B1;0.407546!10076-102A4;0.382342!10073-102A1;0.392039!10036-101E9;0.355199!10195-103E6;0.469292!10277-104E7;0.398065!10434-106E2;0.281362!10550-107I1;0.884261!10545-107H5;0.652328!10544-107H4;0.575988!10704-109H2;0.448477!10510-107D6;0.934386!10558-107I9;0.784011!10020-101D2;0.291792!10732-110B3;0.358387!10049-101G4;0.337758!10698-109G5;0.964987!10437-106E5;0.235388!10417-106C3;0.704886!10035-101E8;0.630287!10171-103B9;0.484239!10157-103A4;0.327213!10034-101E7;0.381941!10072-101I9;0.455129!10199-103F1;0.296133!10200-103F2;0.195746!10697-109G4;0.298157!10723-110A3;0.714825!10179-103C8;0.941159!10160-103A7;0.492641!10180-103C9;0.507737!10162-103A9;0.567294!10021-101D3;0.603784!10840-111E3;0.884905!10706-109H4;0.569842!10033-101E6;0.785843!10032-101E5;0.466793!10490-107B4;0.480986!10439-106E7;0.830822!10022-101D4;0.648452!10176-103C5;0.297701!10469-106I1;0.438734!10067-101I4;0.877745!10411-106B6;0.512009!10471-106I3;0.643802!10030-101E3;0.693775!10475-106I7;0.395878!10787-110H4;0.738885!10477-106I9;0.999645!10695-109G2;0.59621!11771-123I7;0.572085!11772-123I8;0.146045!11773-123I9;0.0968531!10093-102C3;0.113771!10442-106F1;0.395704!10442-106F1;0.88512!10201-103F3;0.994494!10639-108I9;0.255457!11843-124H7;0.546706!11841-124H5;0.712753!10693-109F9;0.970461!10436-106E4;0.672892!10483-107A6;0.721694!10282-104F3;0.737231!10023-101D5;0.208855!10066-101I3;0.301976!10065-101I2;0.345474!10800-110I8;0.365713!10610-108F7;0.849737!10841-111E4;0.423834!10541-107H1;0.449279!10842-111E5;0.99138!10562-108A4;0.828821!10024-101D6;0.811149!10064-101I1;0.459449!10609-108F6;0.596589!10048-101G3;0.230462!10781-110G7;0.1934!10181-103D1;0.872532!10159-103A6;0.317116!10056-101H2;0.369248!10737-110B8;0.401272!10025-101D7;0.697071!10044-101F8;0.962701!10424-106D1;0.456593!10463-106H4;0.531753!10616-108G4;0.513144!10486-107A9;0.784193!10062-101H8;0.621195!10202-103F4;0.415282!10158-103A5;0.222061!10441-106E9;0.343021!10031-101E4;0.579888!10063-101H9;0.462107!10063-101H9;0.349028!11763-123H8;0.441!11765-123I1;0.826386!11768-123I4;0.695508!10807-111A6;0.409969!10790-110H7;0.54744!10798-110I6;0.802716!10786-110H3;0.311837!10591-108D6;0.886422!10593-108D8;0.50303!10590-108D5;0.717587!10026-101D8;0.743997!10096-102C6;0.42456!10168-103B6;0.553993!10154-103A1;0.234544!10209-103G2;0.3333!10061-101H7;0.183577!10027-101D9;0.266138!10043-101F7;0.340359!10783-110G9;0.131704!10028-101E1;0.429859!10060-101H6;0.267203!10203-103F5;0.40606!10059-101H5;0.147131!10047-101G2;0.195451!10029-101E2;0.247578!10058-101H4;0.423808!10418-106C4;0.310734!10492-107B6;0.819007!10694-109G1;0.611499!10797-110I5;0.6047!10057-101H3;0.586356!10100-102D1;0.47047!10055-101H1;0.372717!10204-103F6;0.347817!10191-103E2;0.156198!10563-108A5;0.225311
|name=motif415
|name=motif415
|tomtom_result=RGM1#MA0366.1;-2;0.000961037;0.457454;0.795518;5;CACCCCT;CCCCT;-!MSN4#MA0342.1;-2;0.00167126;0.795518;0.795518;5;CACCCCT;CCCCT;-!MSN2#MA0341.1;-2;0.00440528;2.09691;0.872318;5;CACCCCT;CCCCT;-!RPH1#MA0372.1;-1;0.00523843;2.49349;0.872318;6;CACCCCT;ACCCCTAA;+!Zfp423#MA0116.1;1;0.00606704;2.88791;0.872318;7;CACCCCT;GCACCCCTGGGTGCC;-!AFT2#MA0270.1;2;0.00622412;2.96268;0.872318;6;CACCCCT;CACACCCC;+!T#MA0009.1;2;0.00775045;3.68921;0.872318;7;CACCCCT;TTCACACCTAG;-!hkb#MA0450.1;1;0.00801955;3.8173;0.872318;7;CACCCCT;TCACGCCCC;-!RAP1#MA0359.1;0;0.00835211;3.97561;0.872318;7;CACCCCT;CACCCATACA;+!TBF1#MA0403.1;-1;0.009163;4.36159;0.872318;6;CACCCCT;AACCCTAA;+!SP1#MA0079.1;2;0.0110798;5.27399;0.958907;7;CACCCCT;ACCCCGCCCC;-!GIS1#MA0306.1;-1;0.0124133;5.90874;0.98479;6;CACCCCT;ACCCCTAAA;+!YER130C#MA0423.1;-1;0.016117;7.67168;1;6;CACCCCT;ACCCCTATT;+!MZF1_5-13#MA0057.1;1;0.0179005;8.52065;1;7;CACCCCT;TTCCCCCTAC;-!Kr#MA0452.1;0;0.0188284;8.96232;1;7;CACCCCT;TAACCCTTTTG;-
}}
}}

Latest revision as of 14:40, 7 September 2012

Full Name: motif415

Motif matrix
POACGT
0106178800
0261788000
031569726596019495
04037929238590
0506178800
0606178800
0700061788

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
RGM1#MA0366.1-20.0009610370.4574540.7955185CACCCCTCCCCT-
MSN4#MA0342.1-20.001671260.7955180.7955185CACCCCTCCCCT-
MSN2#MA0341.1-20.004405282.096910.8723185CACCCCTCCCCT-
RPH1#MA0372.1-10.005238432.493490.8723186CACCCCTACCCCTAA+
Zfp423#MA0116.110.006067042.887910.8723187CACCCCTGCACCCCTGGGTGCC-
AFT2#MA0270.120.006224122.962680.8723186CACCCCTCACACCCC+
T#MA0009.120.007750453.689210.8723187CACCCCTTTCACACCTAG-
hkb#MA0450.110.008019553.81730.8723187CACCCCTTCACGCCCC-
RAP1#MA0359.100.008352113.975610.8723187CACCCCTCACCCATACA+
TBF1#MA0403.1-10.0091634.361590.8723186CACCCCTAACCCTAA+
SP1#MA0079.120.01107985.273990.9589077CACCCCTACCCCGCCCC-
GIS1#MA0306.1-10.01241335.908740.984796CACCCCTACCCCTAAA+
YER130C#MA0423.1-10.0161177.6716816CACCCCTACCCCTATT+
MZF1_5-13#MA0057.110.01790058.5206517CACCCCTTTCCCCCTAC-
Kr#MA0452.100.01882848.9623217CACCCCTTAACCCTTTTG-
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