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MacroAPE 1083:IRF5 f1: Difference between revisions

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76147!12184-129A6;0.497378!10809-111A8;0.480907!10597-108E3;0.00495821!10717-109I6;0.0554576!10455-106G5;0.166606!10534-107G3;0.363811!10429-106D6;0.439471!10464-106H5;0.858914!10827-111C8;0.750223!10789-110H6;0.41617!10828-111C9;0.698184!10788-110H5;0.599154!10792-110H9;0.105624!10765-110E9;0.583783!10829-111D1;0.867116!10830-111D2;0.214768!10831-111D3;0.0620576!10832-111D4;0.692143!10833-111D5;0.427282!10764-110E8;0.40409!10770-110F5;0.533123!10399-106A3;0.720081!10400-106A4;0.748635!10405-106A9;0.760114!10834-111D6;0.730958!10835-111D7;0.32601!10836-111D8;0.312534!10837-111D9;0.111238!10699-109G6;0.158852!10802-111A1;0.106355!10796-110I4;0.436875!10010-101C1;0.457232!10810-111A9;0.160078!10421-106C7;0.0517954!10708-109H6;0.298473!12235-129G3;0.147335!12236-129G4;0.149882!12237-129G5;0.239564!10167-103B5;0.16648!10151-102I7;0.95705!10428-106D5;0.993657!10795-110I3;0.20617!10805-111A4;0.175587!10052-101G7;0.161806!10189-103D9;0.412456!10589-108D4;0.018238!10425-106D2;0.782495!10427-106D4;0.435804!10702-109G9;0.04916!10432-106D9;0.7621!10496-107C1;0.635299!10718-109I7;0.281851!10011-101C2;0.380736!10053-101G8;0.213957!10686-109F2;0.192041!10084-102B3;0.557831!10012-101C3;0.93824!10085-102B4;0.846367!10482-107A5;0.338534!10419-106C5;0.267825!10080-102A8;0.709122!10760-110E4;0.929681!10709-109H7;0.0523713!10710-109H8;0.264425!10703-109H1;0.275199!10719-109I8;0.263324!10642-109A3;0.0694492!10177-103C6;0.819847!10164-103B2;0.668456!10173-103C2;0.617698!10166-103B4;0.899173!10083-102B2;0.764236!10188-103D8;0.912404!10552-107I3;0.502679!10553-107I4;0.414159!10013-101C4;0.0145059!10536-107G5;0.839981!10618-108G6;0.239335!10423-106C9;0.00334971!10785-110H2;0.0689527!12238-129G6;0.0151169!12239-129G7;0.240191!12240-129G8;0.577961!10416-106C2;0.00162241!10801-110I9;0.537303!10766-110F1;0.316047!10824-111C5;0.0928283!10825-111C6;0.00243858!10826-111C7;0.00107487!10454-106G4;0.00102619!10409-106B4;0.00363692!10638-108I8;0.102987!10636-108I6;0.133566!10513-107D9;0.577079!10420-106C6;0.00257964!10082-102B1;0.164974!10014-101C5;0.554721!10070-101I7;0.28013!10452-106G2;0.630454!10453-106G3;0.197815!10449-106F8;0.690782!10042-101F6;0.742989!10069-101I6;0.650627!10193-103E4;0.148527!10631-108I1;0.888208!10438-106E6;0.702239!10488-107B2;0.667566!10196-103E7;0.627497!10071-101I8;0.173917!10071-101I8;0.103096!10041-101F5;0.142607!10451-106G1;0.573034!10450-106F9;0.844063!10604-108F1;0.176008!10605-108F2;0.279427!10606-108F3;0.723505!10603-108E9;0.306381!10497-107C2;0.350549!10448-106F7;0.979013!10643-109A4;0.269906!10426-106D3;0.152244!10431-106D8;0.27058!10197-103E8;0.0288702!10443-106F2;0.191963!10815-111B5;0.240129!10816-111B6;0.386362!10817-111B7;0.326647!10015-101C6;0.299138!10410-106B5;0.908362!10054-101G9;0.0461005!10758-110E2;0.827524!10711-109H9;0.163504!10040-101F4;0.396469!10470-106I2;0.926407!10415-106C1;0.167921!10198-103E9;0.972345!10614-108G2;0.199144!10612-108F9;0.00929903!10549-107H9;0.047062!10615-108G3;0.0783707!10487-107B1;0.41176!10433-106E1;0.855758!10688-109F4;0.00087144!10444-106F3;0.445638!10444-106F3;0.0890944!10485-107A8;0.0846552!10413-106B8;0.269848!10175-103C4;0.820962!10161-103A8;0.632068!12131-128D7;0.971424!10624-108H3;0.811136!10712-109I1;0.855492!10205-103F7;0.598669!10206-103F8;0.0484538!10207-103F9;0.0883631!10050-101G5;0.027395!10051-101G6;0.636509!10016-101C7;0.312628!10046-101G1;0.14199!10778-110G4;0.410707!10633-108I3;0.552318!10818-111B8;0.0362075!10819-111B9;0.167342!10820-111C1;0.222366!10484-107A7;0.184998!10808-111A7;0.369353!10169-103B7;0.29524!10153-102I9;0.761277!13425-144D5;0.877032!13433-144E4;0.00205553!13437-144E8;0.010368!11904-125F5;0.019144!11905-125F6;0.409759!10039-101F3;0.76349!10791-110H8;0.943422!10017-101C8;0.0482248!10045-101F9;0.8292!10509-107D5;0.370187!10839-111E2;0.650701!10692-109F8;0.555849!10079-102A7;0.0509253!10078-102A6;0.0676793!10721-110A1;0.131435!10569-108B2;0.236772!10570-108B3;0.770952!10571-108B4;0.906115!10647-109A8;0.344778!10752-110D5;0.0341914!10782-110G8;0.119275!10726-110A6;0.589703!10018-101C9;0.189419!10086-102B5;0.241399!10182-103D2;0.999448!10165-103B3;0.73485!10499-107C4;0.6346!10408-106B3;0.707949!10019-101D1;0.0982662!10068-101I5;0.367426!10075-102A3;0.8042!10077-102A5;0.456968!10727-110A7;0.0209435!10775-110G1;0.464898!10412-106B7;0.26292!12231-129F8;0.652581!12232-129F9;0.538407!12233-129G1;0.506741!12234-129G2;0.496136!10414-106B9;0.633124!10170-103B8;0.156231!10183-103D3;0.771928!10150-102I6;0.723625!10174-103C3;0.743329!10155-103A2;0.657645!10038-101F2;0.908591!10838-111E1;0.890772!10759-110E3;0.00711807!10514-107E1;0.0103444!10465-106H6;0.535604!10691-109F7;0.884051!10843-111E6;0.00470613!10844-111E7;0.28066!11747-123G1;0.0200969!11748-123G2;0.651545!11749-123G3;0.92902!11750-123G4;0.530273!11751-123G5;0.0781175!11840-124H4;0.219517!11752-123G6;0.00185773!11753-123G7;0.884244!11754-123G8;0.886592!11755-123G9;0.653944!11756-123H1;0.700129!11833-124G6;0.328092!11760-123H5;0.812594!11836-124G9;0.538183!11758-123H3;0.210704!11835-124G8;0.786932!11762-123H7;0.616382!11838-124H2;0.892967!11757-123H2;0.939435!11759-123H4;0.63051!11761-123H6;0.95992!11842-124H6;0.749368!11837-124H1;0.421843!10568-108B1;0.681934!13230-141I8;0.109923!13231-141I9;0.91756!10696-109G3;0.761225!10493-107B7;0.530265!10494-107B8;0.638216!10850-111F4;0.452358!10851-111F5;0.62011!10852-111F6;0.928408!10853-111F7;0.827154!10854-111F8;0.0631211!10855-111F9;0.0722301!10856-111G1;0.689202!10847-111F1;0.715175!10846-111E9;0.0177196!10848-111F2;0.00711654!10845-111E8;0.807483!10857-111G2;0.00385925!10858-111G3;0.530549!10156-103A3;0.510041!11901-125F2;0.870168!11902-125F3;0.0404267!11903-125F4;0.117408!10689-109F5;0.0329612!10648-109A9;0.021793!10784-110H1;0.424621!10744-110C6;0.106312!10772-110F7;7.93002e-05!10474-106I6;0.149098!10600-108E6;0.0260728!10684-109E9;0.635318!12226-129F3;0.889926!12227-129F4;0.013732!10508-107D4;0.0461228!10539-107G8;0.0844026!10607-108F4;0.362173!10555-107I6;0.401487!10774-110F9;0.263692!10637-108I7;0.0175604!10663-109C6;0.315864!10728-110A8;0.98234!10729-110A9;0.197379!10430-106D7;0.875677!10730-110B1;0.61972!10813-111B3;0.5912!10812-111B2;0.184304!10037-101F1;0.0251893!10172-103C1;0.919081!10163-103B1;0.7748!10076-102A4;0.665903!10073-102A1;0.921657!10036-101E9;0.298146!10195-103E6;0.841738!10277-104E7;0.86263!10434-106E2;0.660838!10550-107I1;0.217779!10545-107H5;0.0396367!10544-107H4;0.747791!10704-109H2;0.167537!10510-107D6;0.775574!10558-107I9;0.313472!10020-101D2;0.156925!10732-110B3;0.182675!10049-101G4;0.242112!10698-109G5;0.370491!10437-106E5;0.0371062!10417-106C3;0.656582!10035-101E8;0.423875!10171-103B9;0.978267!10157-103A4;0.920885!10034-101E7;0.699327!10072-101I9;0.989098!10199-103F1;0.378951!10200-103F2;0.0890663!10697-109G4;0.12737!10723-110A3;0.51207!10179-103C8;0.591587!10160-103A7;0.233695!10180-103C9;0.495307!10162-103A9;0.091172!10021-101D3;0.218579!10840-111E3;0.742343!10706-109H4;0.0145892!10033-101E6;0.872962!10032-101E5;0.587153!10490-107B4;0.876361!10439-106E7;0.0965305!10022-101D4;0.488176!10176-103C5;0.0832208!10469-106I1;0.694356!10067-101I4;0.202874!10411-106B6;0.538295!10471-106I3;0.944764!10030-101E3;0.365877!10475-106I7;0.541845!10787-110H4;0.000916921!10477-106I9;0.252338!10695-109G2;0.1904!11771-123I7;0.106684!11772-123I8;0.0336576!11773-123I9;0.0253897!10093-102C3;0.013943!10442-106F1;0.028534!10442-106F1;0.0860087!10201-103F3;0.0678034!10639-108I9;0.0142297!11843-124H7;0.382655!11841-124H5;0.633692!10693-109F9;0.457472!10436-106E4;0.837022!10483-107A6;0.762045!10282-104F3;0.207365!10023-101D5;0.0259334!10066-101I3;0.170208!10065-101I2;0.951459!10800-110I8;0.740609!10610-108F7;0.499163!10841-111E4;0.734639!10541-107H1;0.0687475!10842-111E5;0.0672564!10562-108A4;0.000480108!10024-101D6;0.280338!10064-101I1;0.166013!10609-108F6;0.635451!10048-101G3;0.587988!10781-110G7;0.0302954!10181-103D1;0.767263!10159-103A6;0.791455!10056-101H2;0.795391!10737-110B8;0.57845!10025-101D7;0.588914!10044-101F8;0.0319314!10424-106D1;0.216062!10463-106H4;0.0363209!10616-108G4;0.509706!10486-107A9;0.239081!10062-101H8;0.936803!10202-103F4;0.563679!10158-103A5;0.0259093!10441-106E9;0.764523!10031-101E4;0.0979726!10063-101H9;0.827714!10063-101H9;0.272537!11763-123H8;0.08741!11765-123I1;0.353735!11768-123I4;0.383101!10807-111A6;0.589029!10790-110H7;0.0498463!10798-110I6;0.00208051!10786-110H3;0.03181!10591-108D6;8.61885e-05!10593-108D8;0.000521674!10590-108D5;0.00133962!10026-101D8;0.00139977!10096-102C6;0.941641!10168-103B6;0.70693!10154-103A1;0.65463!10209-103G2;0.959056!10061-101H7;0.684482!10027-101D9;0.865571!10043-101F7;0.156927!10783-110G9;0.481971!10028-101E1;0.0521673!10060-101H6;0.493279!10203-103F5;0.978728!10059-101H5;0.413166!10047-101G2;0.624173!10029-101E2;0.49982!10058-101H4;0.288671!10418-106C4;0.563314!10492-107B6;0.0212348!10694-109G1;0.653596!10797-110I5;0.448065!10057-101H3;0.766945!10100-102D1;0.878684!10055-101H1;0.255774!10204-103F6;0.482644!10191-103E2;0.966173!10563-108A5;0.0281596
|name=IRF5_f1
|name=IRF5_f1
|tomtom_result=IRF2#MA0051.1;1;0.000161326;0.0767911;0.153219;17;TAAAGGAAAGCCAAAAGTGA;GGAAAGCGAAACCAAAAC;+!HMG-I/Y#MA0045.1;-1;0.000459751;0.218842;0.218324;16;TAAAGGAAAGCCAAAAGTGA;CAACAAATGGAAAAAC;+!Klf4#MA0039.1;-1;0.00171756;0.81756;0.436667;10;TAAAGGAAAGCCAAAAGTGA;TAAAGGAAGG;+!FKH1#MA0296.1;1;0.00195095;0.928651;0.436667;19;TAAAGGAAAGCCAAAAGTGA;TGAATTGTAAACAAAGAGGA;+!AZF1#MA0277.1;0;0.00229886;1.09426;0.436667;9;TAAAGGAAAGCCAAAAGTGA;AAAAAGAAA;+!IRF1#MA0050.1;0;0.00429362;2.04377;0.615083;12;TAAAGGAAAGCCAAAAGTGA;GAAAGCGAAACC;+!id1#MA0120.1;-3;0.00471688;2.24523;0.615083;12;TAAAGGAAAGCCAAAAGTGA;CGAAAAGGAAAA;-!STAT1#MA0137.1;-5;0.00641194;3.05208;0.615083;14;TAAAGGAAAGCCAAAAGTGA;GGAAAACGAAACTG;+!RME1#MA0370.1;2;0.00680795;3.24058;0.615083;8;TAAAGGAAAGCCAAAAGTGA;TCCAAAGGAA;+!FOXF2#MA0030.1;0;0.00695657;3.31133;0.615083;14;TAAAGGAAAGCCAAAAGTGA;CAAACGTAAACAAT;+!tll#MA0459.1;-5;0.00716849;3.4122;0.615083;10;TAAAGGAAAGCCAAAAGTGA;AAAAGTCAAA;+!GCR2#MA0305.1;-4;0.00777152;3.69924;0.615083;7;TAAAGGAAAGCCAAAAGTGA;AGGAAGC;-!SFL1#MA0377.1;3;0.0100826;4.79933;0.736612;18;TAAAGGAAAGCCAAAAGTGA;TAGAGAATAGAAGAAATAAAA;+!Dof2#MA0020.1;-6;0.0127999;6.09277;0.808596;6;TAAAGGAAAGCCAAAAGTGA;AAAGCA;+!br_Z3#MA0012.1;-6;0.0131822;6.27471;0.808596;11;TAAAGGAAAGCCAAAAGTGA;TAAACTAAAAG;+!Evi1#MA0029.1;-2;0.0136221;6.4841;0.808596;14;TAAAGGAAAGCCAAAAGTGA;AAGATAAGATAATA;+!Foxa2#MA0047.1;-7;0.0170233;8.1031;0.832823;12;TAAAGGAAAGCCAAAAGTGA;AAGTAAATATTG;-!br_Z1#MA0010.1;-3;0.0184495;8.78197;0.832823;14;TAAAGGAAAGCCAAAAGTGA;GTAATAAACAAATC;+!MNB1A#MA0053.1;-6;0.0193164;9.19459;0.832823;5;TAAAGGAAAGCCAAAAGTGA;AAAGC;+!Pax4#MA0068.1;-1;0.0194253;9.24643;0.832823;19;TAAAGGAAAGCCAAAAGTGA;GAAAAATTTCCCATACTCCACTCCCCCCCC;+!ETS1#MA0098.1;-3;0.0204317;9.72548;0.832823;6;TAAAGGAAAGCCAAAAGTGA;CGGAAA;-!slp1#MA0458.1;-2;0.0206167;9.81356;0.832823;11;TAAAGGAAAGCCAAAAGTGA;AATGTAAACAA;-
}}
}}

Latest revision as of 14:56, 7 September 2012

Full Name: IRF5_f1

Motif matrix
POACGT
10.88888888888889010.01.888888888888892.2222222222222197
23.888888888888890.01.11111111111110980.0
35.00.00.00.0
45.00.00.00.0
50.00.04.1111111111111150.8888888888888901
60.88888888888889010.04.1111111111111150.0
73.111111111111110.01.888888888888890.0
85.00.00.00.0
95.00.00.00.0
101.888888888888890.03.111111111111110.0
110.05.00.00.0
121.11111111111110982.111111111111110.88888888888889010.8888888888888901
134.00.01.00.0
145.00.00.00.0
155.00.00.00.0
163.222222222222220.00.01.7777777777777801
170.02.111111111111112.88888888888888970.0
182.22222222222221970.00.02.7777777777777803
190.00.04.1111111111111150.8888888888888901
203.4444444444444451.11111111111110980.2222222222222220.222222222222222

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
IRF2#MA0051.110.0001613260.07679110.15321917TAAAGGAAAGCCAAAAGTGAGGAAAGCGAAACCAAAAC+
HMG-I/Y#MA0045.1-10.0004597510.2188420.21832416TAAAGGAAAGCCAAAAGTGACAACAAATGGAAAAAC+
Klf4#MA0039.1-10.001717560.817560.43666710TAAAGGAAAGCCAAAAGTGATAAAGGAAGG+
FKH1#MA0296.110.001950950.9286510.43666719TAAAGGAAAGCCAAAAGTGATGAATTGTAAACAAAGAGGA+
AZF1#MA0277.100.002298861.094260.4366679TAAAGGAAAGCCAAAAGTGAAAAAAGAAA+
IRF1#MA0050.100.004293622.043770.61508312TAAAGGAAAGCCAAAAGTGAGAAAGCGAAACC+
id1#MA0120.1-30.004716882.245230.61508312TAAAGGAAAGCCAAAAGTGACGAAAAGGAAAA-
STAT1#MA0137.1-50.006411943.052080.61508314TAAAGGAAAGCCAAAAGTGAGGAAAACGAAACTG+
RME1#MA0370.120.006807953.240580.6150838TAAAGGAAAGCCAAAAGTGATCCAAAGGAA+
FOXF2#MA0030.100.006956573.311330.61508314TAAAGGAAAGCCAAAAGTGACAAACGTAAACAAT+
tll#MA0459.1-50.007168493.41220.61508310TAAAGGAAAGCCAAAAGTGAAAAAGTCAAA+
GCR2#MA0305.1-40.007771523.699240.6150837TAAAGGAAAGCCAAAAGTGAAGGAAGC-
SFL1#MA0377.130.01008264.799330.73661218TAAAGGAAAGCCAAAAGTGATAGAGAATAGAAGAAATAAAA+
Dof2#MA0020.1-60.01279996.092770.8085966TAAAGGAAAGCCAAAAGTGAAAAGCA+
br_Z3#MA0012.1-60.01318226.274710.80859611TAAAGGAAAGCCAAAAGTGATAAACTAAAAG+
Evi1#MA0029.1-20.01362216.48410.80859614TAAAGGAAAGCCAAAAGTGAAAGATAAGATAATA+
Foxa2#MA0047.1-70.01702338.10310.83282312TAAAGGAAAGCCAAAAGTGAAAGTAAATATTG-
br_Z1#MA0010.1-30.01844958.781970.83282314TAAAGGAAAGCCAAAAGTGAGTAATAAACAAATC+
MNB1A#MA0053.1-60.01931649.194590.8328235TAAAGGAAAGCCAAAAGTGAAAAGC+
Pax4#MA0068.1-10.01942539.246430.83282319TAAAGGAAAGCCAAAAGTGAGAAAAATTTCCCATACTCCACTCCCCCCCC+
ETS1#MA0098.1-30.02043179.725480.8328236TAAAGGAAAGCCAAAAGTGACGGAAA-
slp1#MA0458.1-20.02061679.813560.83282311TAAAGGAAAGCCAAAAGTGAAATGTAAACAA-
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