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MacroAPE 1083:CNhs11840 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;75.16013341366025;843.8290265341346;69.77407808354094;101.98727183794854!2;176.59845198735619;830.3005205029577;30.428550042460056;53.422987...")
 
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D6;0.0218271!10464-106H5;0.0430004!10827-111C8;0.0187591!10789-110H6;0.16517!10828-111C9;0.451395!10788-110H5;0.613662!10792-110H9;0.141387!10765-110E9;0.304369!10829-111D1;0.722324!10830-111D2;0.179091!10831-111D3;0.472317!10832-111D4;0.656401!10833-111D5;0.171239!10764-110E8;0.287467!10770-110F5;0.320961!10399-106A3;0.130911!10400-106A4;0.642416!10405-106A9;0.394013!10834-111D6;0.522724!10835-111D7;0.295974!10836-111D8;0.0542082!10837-111D9;0.252241!10699-109G6;0.118593!10802-111A1;0.25369!10796-110I4;0.235752!10010-101C1;0.0503927!10810-111A9;0.114288!10421-106C7;0.0569664!10708-109H6;0.138933!12235-129G3;0.0788086!12236-129G4;0.566706!12237-129G5;0.616288!10167-103B5;0.0143564!10151-102I7;0.0762897!10428-106D5;0.0810008!10795-110I3;0.507881!10805-111A4;0.282561!10052-101G7;0.0151977!10189-103D9;0.030256!10589-108D4;0.0321523!10425-106D2;0.0853665!10427-106D4;0.678729!10702-109G9;0.0308277!10432-106D9;0.218465!10496-107C1;0.0350215!10718-109I7;0.218793!10011-101C2;0.433738!10053-101G8;0.0574568!10686-109F2;0.241933!10084-102B3;0.522469!10012-101C3;0.0825145!10085-102B4;0.0935094!10482-107A5;0.0779273!10419-106C5;0.0498669!10080-102A8;0.0275281!10760-110E4;0.130035!10709-109H7;0.105059!10710-109H8;0.0226443!10703-109H1;0.199721!10719-109I8;0.0755914!10642-109A3;0.00620474!10177-103C6;0.0671127!10164-103B2;0.0979975!10173-103C2;0.141624!10166-103B4;0.475059!10083-102B2;0.331047!10188-103D8;0.211486!10552-107I3;0.0838694!10553-107I4;0.0436961!10013-101C4;0.162356!10536-107G5;0.0367742!10618-108G6;0.848079!10423-106C9;0.0447766!10785-110H2;0.0379154!12238-129G6;0.0789079!12239-129G7;0.2626!12240-129G8;0.239233!10416-106C2;0.432055!10801-110I9;0.13728!10766-110F1;0.405387!10824-111C5;0.394037!10825-111C6;0.0119875!10826-111C7;0.0167233!10454-106G4;0.0218949!10409-106B4;0.0138088!10638-108I8;0.174078!10636-108I6;0.0705081!10513-107D9;0.0751651!10420-106C6;0.0518672!10082-102B1;0.00364077!10014-101C5;0.00895028!10070-101I7;0.0229627!10452-106G2;0.0135313!10453-106G3;0.0259377!10449-106F8;0.0254182!10042-101F6;0.0128143!10069-101I6;0.0611111!10193-103E4;0.0305476!10631-108I1;0.107303!10438-106E6;0.0600879!10488-107B2;0.00446015!10196-103E7;0.0324476!10071-101I8;0.101231!10071-101I8;0.0061506!10041-101F5;0.121359!10451-106G1;0.0157319!10450-106F9;0.00609919!10604-108F1;0.00114172!10605-108F2;0.0476898!10606-108F3;0.00873062!10603-108E9;0.040883!10497-107C2;0.146507!10448-106F7;0.0856908!10643-109A4;0.0284943!10426-106D3;0.0296373!10431-106D8;0.0226325!10197-103E8;0.0278605!10443-106F2;0.0336326!10815-111B5;0.0729526!10816-111B6;0.0914497!10817-111B7;0.0760572!10015-101C6;0.0871217!10410-106B5;0.0958299!10054-101G9;0.0879834!10758-110E2;0.0247939!10711-109H9;0.498963!10040-101F4;0.1962!10470-106I2;0.0994594!10415-106C1;0.397237!10198-103E9;0.276317!10614-108G2;0.0145773!10612-108F9;0.00521484!10549-107H9;0.0764026!10615-108G3;0.0880014!10487-107B1;0.0256307!10433-106E1;0.0438886!10688-109F4;0.028705!10444-106F3;0.275191!10444-106F3;0.70555!10485-107A8;0.590283!10413-106B8;0.0690238!10175-103C4;0.105272!10161-103A8;0.0710137!12131-128D7;0.0925724!10624-108H3;0.541514!10712-109I1;0.817647!10205-103F7;0.0619079!10206-103F8;0.0701355!10207-103F9;0.0841454!10050-101G5;0.152037!10051-101G6;0.351918!10016-101C7;0.159369!10046-101G1;0.184424!10778-110G4;0.273834!10633-108I3;0.0777035!10818-111B8;0.0957947!10819-111B9;0.0653244!10820-111C1;0.0622323!10484-107A7;0.0687969!10808-111A7;0.00636161!10169-103B7;0.0918812!10153-102I9;0.0780052!13425-144D5;0.0867835!13433-144E4;0.0034012!13437-144E8;0.000823977!11904-125F5;0.00121838!11905-125F6;0.865841!10039-101F3;0.696285!10791-110H8;0.0864955!10017-101C8;0.0212949!10045-101F9;0.106614!10509-107D5;0.0773402!10839-111E2;0.116318!10692-109F8;0.17633!10079-102A7;0.0280855!10078-102A6;0.041607!10721-110A1;0.26508!10569-108B2;0.035694!10570-108B3;0.483182!10571-108B4;0.604408!10647-109A8;0.302247!10752-110D5;0.264487!10782-110G8;0.191362!10726-110A6;0.495957!10018-101C9;0.320334!10086-102B5;0.964166!10182-103D2;0.276313!10165-103B3;0.116965!10499-107C4;0.143554!10408-106B3;0.0120121!10019-101D1;0.0145382!10068-101I5;0.0602701!10075-102A3;0.112443!10077-102A5;0.0390069!10727-110A7;0.0345335!10775-110G1;0.0973498!10412-106B7;0.0527676!12231-129F8;0.0478335!12232-129F9;0.572562!12233-129G1;0.522015!12234-129G2;0.585459!10414-106B9;0.95623!10170-103B8;0.0441935!10183-103D3;0.148722!10150-102I6;0.105751!10174-103C3;0.102437!10155-103A2;0.101031!10038-101F2;0.104664!10838-111E1;0.0687758!10759-110E3;0.0531978!10514-107E1;0.0199357!10465-106H6;0.0834286!10691-109F7;0.00262845!10843-111E6;0.26792!10844-111E7;0.0632491!11747-123G1;0.32502!11748-123G2;0.475805!11749-123G3;0.772991!11750-123G4;0.593552!11751-123G5;0.721596!11840-124H4;0.243148!11752-123G6;0.466374!11753-123G7;0.71013!11754-123G8;0.538721!11755-123G9;0.91782!11756-123H1;0.951271!11833-124G6;0.407658!11760-123H5;0.422642!11836-124G9;0.330283!11758-123H3;0.640665!11835-124G8;0.265802!11762-123H7;0.120109!11838-124H2;0.155123!11757-123H2;0.171748!11759-123H4;0.763187!11761-123H6;0.447483!11842-124H6;0.273329!11837-124H1;0.424632!10568-108B1;0.163714!13230-141I8;0.577307!13231-141I9;0.475708!10696-109G3;0.565465!10493-107B7;0.352166!10494-107B8;0.0350364!10850-111F4;0.372878!10851-111F5;0.795212!10852-111F6;0.25505!10853-111F7;0.961811!10854-111F8;0.235657!10855-111F9;0.583374!10856-111G1;0.721623!10847-111F1;0.715!10846-111E9;0.658651!10848-111F2;0.889546!10845-111E8;0.182618!10857-111G2;0.195754!10858-111G3;0.0406466!10156-103A3;0.157196!11901-125F2;0.105472!11902-125F3;0.847306!11903-125F4;0.710453!10689-109F5;0.723571!10648-109A9;0.45103!10784-110H1;0.125387!10744-110C6;0.210205!10772-110F7;0.168706!10474-106I6;0.241346!10600-108E6;0.0330716!10684-109E9;0.27996!12226-129F3;0.864294!12227-129F4;0.118298!10508-107D4;0.0826219!10539-107G8;0.0605981!10607-108F4;0.595716!10555-107I6;0.0221602!10774-110F9;0.023701!10637-108I7;0.0148041!10663-109C6;0.0256611!10728-110A8;0.0138465!10729-110A9;0.0376235!10430-106D7;0.284344!10730-110B1;0.0511805!10813-111B3;0.0179634!10812-111B2;0.713469!10037-101F1;0.490731!10172-103C1;0.093049!10163-103B1;0.143498!10076-102A4;0.0872015!10073-102A1;0.0893904!10036-101E9;0.139655!10195-103E6;0.0877052!10277-104E7;0.108572!10434-106E2;0.170012!10550-107I1;0.0655124!10545-107H5;0.00265464!10544-107H4;0.022636!10704-109H2;0.111666!10510-107D6;0.139575!10558-107I9;0.583009!10020-101D2;0.114775!10732-110B3;0.0880024!10049-101G4;0.901269!10698-109G5;0.963987!10437-106E5;0.105243!10417-106C3;0.0609098!10035-101E8;0.220174!10171-103B9;0.106245!10157-103A4;0.191272!10034-101E7;0.103795!10072-101I9;0.113101!10199-103F1;0.211531!10200-103F2;0.0918164!10697-109G4;0.040795!10723-110A3;0.00370432!10179-103C8;0.241245!10160-103A7;0.136715!10180-103C9;0.14391!10162-103A9;0.81537!10021-101D3;0.637175!10840-111E3;0.0350938!10706-109H4;0.0370082!10033-101E6;0.388954!10032-101E5;0.1328!10490-107B4;0.0919665!10439-106E7;0.00763091!10022-101D4;0.0119736!10176-103C5;0.0563784!10469-106I1;0.160667!10067-101I4;0.08032!10411-106B6;0.0132514!10471-106I3;0.0445063!10030-101E3;0.0380199!10475-106I7;0.0258949!10787-110H4;0.0225185!10477-106I9;0.0183309!10695-109G2;0.309873!11771-123I7;0.0156633!11772-123I8;0.00223004!11773-123I9;0.00502746!10093-102C3;0.80483!10442-106F1;0.10806!10442-106F1;0.0386762!10201-103F3;0.0362299!10639-108I9;0.0338957!11843-124H7;0.0821596!11841-124H5;0.0206083!10693-109F9;0.041446!10436-106E4;0.164681!10483-107A6;0.196942!10282-104F3;0.177369!10023-101D5;0.526292!10066-101I3;0.20659!10065-101I2;0.0766022!10800-110I8;0.0655289!10610-108F7;0.0582906!10841-111E4;0.0901258!10541-107H1;0.0100182!10842-111E5;0.0460978!10562-108A4;0.037026!10024-101D6;0.242823!10064-101I1;0.0339004!10609-108F6;0.00415917!10048-101G3;0.0589618!10781-110G7;0.0504189!10181-103D1;0.672418!10159-103A6;0.0822805!10056-101H2;0.0963217!10737-110B8;0.0497569!10025-101D7;0.124293!10044-101F8;0.13317!10424-106D1;0.0611916!10463-106H4;0.0426207!10616-108G4;0.0272491!10486-107A9;0.166451!10062-101H8;0.00836916!10202-103F4;0.0192377!10158-103A5;0.0473559!10441-106E9;0.0836681!10031-101E4;0.00498106!10063-101H9;0.079121!10063-101H9;0.171269!11763-123H8;0.00656708!11765-123I1;0.061343!11768-123I4;0.224015!10807-111A6;0.175391!10790-110H7;0.00899799!10798-110I6;0.0116798!10786-110H3;0.00750747!10591-108D6;0.000663229!10593-108D8;0.00275617!10590-108D5;0.000983888!10026-101D8;5.50132e-05!10096-102C6;0.762256!10168-103B6;0.0605874!10154-103A1;0.118914!10209-103G2;0.0920644!10061-101H7;0.0317598!10027-101D9;0.0462701!10043-101F7;0.881647!10783-110G9;0.218754!10028-101E1;0.244221!10060-101H6;0.620494!10203-103F5;0.112845!10059-101H5;0.106147!10047-101G2;0.13194!10029-101E2;0.0275801!10058-101H4;0.0669821!10418-106C4;0.0583224!10492-107B6;0.0173135!10694-109G1;0.0326078!10797-110I5;0.278898!10057-101H3;0.0554255!10100-102D1;0.0393727!10055-101H1;0.0275572!10204-103F6;0.0890432!10191-103E2;0.14171!10563-108A5;0.0243177
|name=CNhs11840_bl_f2
|name=CNhs11840_bl_f2
|tomtom_result=SWI5#MA0402.1;-4;0.000822802;0.391654;0.350096;8;CCTGAGCCAGCA;AACCAGCA;-!ACE2#MA0267.1;-5;0.00084088;0.400259;0.350096;7;CCTGAGCCAGCA;ACCAGCA;+!CRZ1#MA0285.1;-1;0.00110469;0.525833;0.350096;9;CCTGAGCCAGCA;CTAAGCCAC;+!Tcfcp2l1#MA0145.1;4;0.00265648;1.26449;0.569163;10;CCTGAGCCAGCA;CCAGTTCAAACCAG;+!BAS1#MA0278.1;6;0.00299322;1.42477;0.569163;12;CCTGAGCCAGCA;GCACAGCCAGAGTCAAGTCAA;+!ASH1#MA0276.1;0;0.00431577;2.05431;0.683873;10;CCTGAGCCAGCA;CCCGATCCGG;-!NFE2L2#MA0150.1;-1;0.0103746;4.93832;0.998691;11;CCTGAGCCAGCA;ATGACTCAGCA;+!Zfx#MA0146.1;4;0.0139914;6.65988;0.998691;10;CCTGAGCCAGCA;CAGGCCTCGGCCCC;-!Ar#MA0007.1;10;0.0174577;8.30987;0.998691;12;CCTGAGCCAGCA;ATAAGAACACCCTGTACCCGCC;+!FOXA1#MA0148.1;-1;0.0174613;8.31159;0.998691;11;CCTGAGCCAGCA;CAAAGTAAACA;-
}}
}}

Latest revision as of 12:17, 7 September 2012

Full Name: CNhs11840_bl_f2

Motif matrix
POACGT
175.16013341366025843.829026534134669.77407808354094101.98727183794854
2176.59845198735619830.300520502957730.42855004246005653.422987336509664
3165.6990933210596308.9106807031206589.73351989672301526.407215948382
480.84600624908595346.3164697437855655.98044745144667.607586424966127
51072.66811672980541.69828344137428044.78330246161410411.600807236490551
6217.11604505261981.63628277564251763.866405505554828.13177653546763
799.89866109923109926.492758287409214.44675583854066849.91233464410303
8138.02741993218802911.10423265892794.37224852434369337.246608753824354
9709.773191942625885.9660714721126710.207057969747083284.80418848479826
1020.269798891763198159.8389212464122897.232651453130913.409138277977465
11177.88112274858815583.7255228200341263.7570478634275465.38681643723469
12785.6194564810628133.563417263073993.2674903575237478.30014576762385

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SWI5#MA0402.1-40.0008228020.3916540.3500968CCTGAGCCAGCAAACCAGCA-
ACE2#MA0267.1-50.000840880.4002590.3500967CCTGAGCCAGCAACCAGCA+
CRZ1#MA0285.1-10.001104690.5258330.3500969CCTGAGCCAGCACTAAGCCAC+
Tcfcp2l1#MA0145.140.002656481.264490.56916310CCTGAGCCAGCACCAGTTCAAACCAG+
BAS1#MA0278.160.002993221.424770.56916312CCTGAGCCAGCAGCACAGCCAGAGTCAAGTCAA+
ASH1#MA0276.100.004315772.054310.68387310CCTGAGCCAGCACCCGATCCGG-
NFE2L2#MA0150.1-10.01037464.938320.99869111CCTGAGCCAGCAATGACTCAGCA+
Zfx#MA0146.140.01399146.659880.99869110CCTGAGCCAGCACAGGCCTCGGCCCC-
Ar#MA0007.1100.01745778.309870.99869112CCTGAGCCAGCAATAAGAACACCCTGTACCCGCC+
FOXA1#MA0148.1-10.01746138.311590.99869111CCTGAGCCAGCACAAAGTAAACA-
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