Personal tools

MCL coexpression mm9:746: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9
|coexpression_dpi_cluster_scores_mean=-0.0786042123762463,-0.0681503169317179,-0.100857357362565,-0.117143633991732,-0.0995085817881827,-0.10457083792045,-0.108025752905418,-0.117143633991732,-0.117143633991732,-0.117143633991732,-0.117143633991732,-0.117143633991732,-0.104355392413692,-0.117143633991732,-0.104657043132237,-0.070757483293204,-0.117143633991732,-0.117143633991732,-0.0910724338778241,-0.117143633991732,0.243004113721036,-0.105165597090101,-0.092013903026949,-0.0986412242334615,-0.108173985254045,-0.0974367613601594,-0.117143633991732,-0.0931069483121428,-0.109588083159992,-0.0896556323316528,-0.117143633991732,-0.0601872841529336,-0.0963246391376443,-0.117143633991732,-0.117143633991732,-0.117143633991732,-0.102272922254747,-0.117143633991732,-0.117143633991732,-0.117143633991732,-0.117143633991732,-0.117143633991732,-0.117143633991732,-0.0790932363202146,-0.0825490645785353,-0.103563812013889,-0.0920433275440188,-0.0928610425959915,-0.0763293560424858,-0.0327930683504291,-0.084973806823722,-0.0784487146587983,-0.110407433770337,-0.117143633991732,-0.117143633991732,0.0404196324144521,0.25736419709068,0.0996944772396648,-0.0627912965400174,-0.0544553213582569,-0.0745021861356413,-0.0613370579520868,-0.117143633991732,-0.073135267783194,-0.0872830737260237,-0.117143633991732,-0.0546224330596318,-0.0767137575758883,-0.0904342488269305,-0.0919946726652099,-0.117143633991732,-0.0585241895647292,-0.0462860894597956,-0.0998260798752093,-0.0908731808106657,-0.117143633991732,-0.0215158032692514,0.0703111310914801,0.0731942635630949,-0.0864460917658195,-0.0707930729890994,-0.0861417452592833,-0.00334399289763976,-0.0120790959125865,0.016914886562955,-0.026892226664916,0.058140859922638,-0.0316687554128972,-0.0593662819513592,-0.0595938903408775,-0.00876873068919965,-0.0901824435236348,-0.117143633991732,-0.117143633991732,-0.117143633991732,-0.117143633991732,1.03976763738001,0.271800398918018,0.205378543880933,0.1701125223256,-0.0707793165202518,0.311101269672077,0.28270179124331,0.0177491300547954,-0.117143633991732,-0.107336055611294,-0.117143633991732,0.447253626417808,0.274588004839707,0.00240415200445802,0.00989764379557966,0.0883090348804818,0.1577569062184,0.0637546351479708,0.253472088200032,0.0336399613954617,0.134552463936427,0.703128738652685,0.829824459070747,0.926941197944195,1.02607330543419,0.862778446865318,0.587024908733091,-0.0225629025833023,-0.0189656865237624,0.287721325098177,-0.117143633991732,-0.117143633991732,-0.117143633991732,0.0230773739532023,0.0262940113194338,-0.0518932417347488,0.00676461750702827,0.0210740687209935,0.104361087594056,0.0376124828950036,0.163598483623549,0.706628074007795,0.0687461691131896,0.447769118973371,-0.034635188501078,0.145704618046069,0.235341130300345,0.355662831562116,0.452704365836936,0.425568671435715,0.415178623864929,0.458921282448062,-0.0930976181570613,0.0402927741660049,0.0642852205481557,0.213858693685801,0.0744699561458779,0.46481169381877,0.290703386280766,-0.0589291677485508,-0.117143633991732,-0.117143633991732,-0.117143633991732,0.345371056701859,0.348665726471704,0.345076280393604,0.386964742987672,0.312620407421525,0.342867396214416,0.325397258212366,0.315064987149745,0.431919932515335,0.327578794609635,0.261573782299979,0.22848517036173,0.203450888078486,0.333125984711861,0.232217378557329,0.0237169333977082,-0.0643447805159143,-0.055765815501966,0.197192995508358,-0.00824040962737884,0.0313962276635557,0.189130490880528,0.168357176969547,0.213114573072356,0.284478193225197,0.403698167286794,0.347593600189078,0.366947579919834,0.417450266759596,0.471939986649102,0.442815657067102,0.563505001255987,0.554581980539552,-0.0364972975539748,0.0346339237643104,-0.0843653055472786,-0.0096500931139648,0.0290586842313354,0.0387293839646611,-0.0397157873732176,0.002115299534804,0.0713181364293496,-0.0113574885684831,-0.0743733090942826,-0.0523847261066632,-0.0574302397766388,-0.108334913872774,-0.0256329695314788,-0.0405509848236627,0.0107042091964787,-0.106162294692255,-0.0209399404892681,0.0749197051621931,0.162481433812535,0.0576414993749398,0.170669418785225,-0.0290269353677375,0.258954608671129,-0.117143633991732,0.36033024190525,0.0731749418172188,0.0719394945759494,0.0760405820977809,0.0875560121158703,0.135972297291481,0.215276052476143,0.372585678736593,0.32423659438886,0.269038851066118,0.261757695476108,0.510646295354388,0.525267446816769,0.233898071999495,-0.117143633991732,-0.117143633991732,0.282919451329052,0.339395257186348,0.0670007929560687,0.0445362696819499,-0.0141636707670061,1.40770524646207,0.0207434927019379,-0.0175541627875142,-0.0412576297346233,-0.0503370546076202,-0.0417181895691358,-0.038643572846548,0.0476705548622471,0.0762751281798276,0.084409205026823,0.00953942990669054,0.231087609880899,0.204444720250235,0.292839252190467,0.374488187617286,-0.0804555721860841,-0.0450304098241362,-0.0736619007920672,-0.102136117596585,0.104881020995633,0.0297841787565058,0.174515002026158,-0.0530129382137103,0.311244930886778,0.231459893905122,-0.0546156773611192,0.0238027418947901,-0.0670953615629006,-0.0406247172554569,-0.0566662279210626,-0.0428036914754884,-0.0130174001698496,0.0244179894443029,0.00896839274663674,0.0400084833353611,0.11642591778786,0.0375026922235273,0.714574750432413,0.965048547569881,0.684818713149025,0.494268486901411,0.361789557224173,0.366513061109156,0.358781705107458,0.235789253204956,0.0293431131547037,-0.0417541383147903,-0.0123219064425095,-0.0483537885055146,-0.0306720105447265,-0.0558039331266766,-0.0865387187970042,-0.105766362748454,-0.117143633991732,0.783965933476967,-0.0515469835324421,0.153171570449837,0.2838684288572,0.393138259078597,0.455988975212511,0.790596821715664,0.867381522331258,0.920288943715381,0.716526455267624,0.0768349044576618,-0.0741509922393084,-0.0130033376425939,-0.0205569896768515,0.0317503280702745,0.0115479094914311,0.0124017526853155,0.00124299047289387,0.039346586237841,-0.00632165472984296,-0.00562928592763013,0.522518424214584,0.092789332929838,-0.0457577766650031,-0.00938423376782723,0.0764698366260587,0.109373722535369,0.158403692941115,0.0984932608497145,0.103105305960004,0.130198926698088,0.0253922643009045,0.0169163964761807,0.114487940091301,0.0316534901834204,0.0470304432203106,1.03707649925049,-0.117143633991732,-0.095894246896876,-0.0868557033596728,1.62128086801745,0.707993112109838,0.40285549886659,0.448267444377838,0.833563608241027,-0.0843157943934197,-0.0887988002360495,-0.0457331780458748,-0.0347182661140458,-0.0150703984095723,-0.0257585990946724,-0.0576339516161961,-0.0477262040616169,-0.06010271583593,-0.0455662230518254,-0.00731196425420743,-0.0173813263754013,0.0971787689987511,0.360140892122531,0.285371862293703,0.411617106795008,0.703195709748598,0.676876478378633,0.683510865081842,0.710928391545063,0.724730285180263,0.669665220248139,0.705920339912027,0.707467728526244,0.713752216947544,0.73066600148676,0.693025234853498,0.680314612504925,0.719113235982754,0.729610792393364,0.670356692729177,0.657125841883881,0.638714399988602,0.719776613710917,0.708309024220599,0.682973828867656,0.716293102450164,0.697922355539693,0.714443939062122,0.708164206489354,0.713196903360206,0.700604693885662,0.617147555210885,0.687090289528676,0.58633034873368,0.55228140195598,0.708329952827636,0.826311902606656,1.03058646866958,0.890227311450844,0.957970183867788
|coexpression_dpi_cluster_scores_mean=-0.0786042123762463,-0.0681503169317179,-0.100857357362565,-0.117143633991732,-0.0995085817881827,-0.10457083792045,-0.108025752905418,-0.117143633991732,-0.117143633991732,-0.117143633991732,-0.117143633991732,-0.117143633991732,-0.104355392413692,-0.117143633991732,-0.104657043132237,-0.070757483293204,-0.117143633991732,-0.117143633991732,-0.0910724338778241,-0.117143633991732,0.243004113721036,-0.105165597090101,-0.092013903026949,-0.0986412242334615,-0.108173985254045,-0.0974367613601594,-0.117143633991732,-0.0931069483121428,-0.109588083159992,-0.0896556323316528,-0.117143633991732,-0.0601872841529336,-0.0963246391376443,-0.117143633991732,-0.117143633991732,-0.117143633991732,-0.102272922254747,-0.117143633991732,-0.117143633991732,-0.117143633991732,-0.117143633991732,-0.117143633991732,-0.117143633991732,-0.0790932363202146,-0.0825490645785353,-0.103563812013889,-0.0920433275440188,-0.0928610425959915,-0.0763293560424858,-0.0327930683504291,-0.084973806823722,-0.0784487146587983,-0.110407433770337,-0.117143633991732,-0.117143633991732,0.0404196324144521,0.25736419709068,0.0996944772396648,-0.0627912965400174,-0.0544553213582569,-0.0745021861356413,-0.0613370579520868,-0.117143633991732,-0.073135267783194,-0.0872830737260237,-0.117143633991732,-0.0546224330596318,-0.0767137575758883,-0.0904342488269305,-0.0919946726652099,-0.117143633991732,-0.0585241895647292,-0.0462860894597956,-0.0998260798752093,-0.0908731808106657,-0.117143633991732,-0.0215158032692514,0.0703111310914801,0.0731942635630949,-0.0864460917658195,-0.0707930729890994,-0.0861417452592833,-0.00334399289763976,-0.0120790959125865,0.016914886562955,-0.026892226664916,0.058140859922638,-0.0316687554128972,-0.0593662819513592,-0.0595938903408775,-0.00876873068919965,-0.0901824435236348,-0.117143633991732,-0.117143633991732,-0.117143633991732,-0.117143633991732,1.03976763738001,0.271800398918018,0.205378543880933,0.1701125223256,-0.0707793165202518,0.311101269672077,0.28270179124331,0.0177491300547954,-0.117143633991732,-0.107336055611294,-0.117143633991732,0.447253626417808,0.274588004839707,0.00240415200445802,0.00989764379557966,0.0883090348804818,0.1577569062184,0.0637546351479708,0.253472088200032,0.0336399613954617,0.134552463936427,0.703128738652685,0.829824459070747,0.926941197944195,1.02607330543419,0.862778446865318,0.587024908733091,-0.0225629025833023,-0.0189656865237624,0.287721325098177,-0.117143633991732,-0.117143633991732,-0.117143633991732,0.0230773739532023,0.0262940113194338,-0.0518932417347488,0.00676461750702827,0.0210740687209935,0.104361087594056,0.0376124828950036,0.163598483623549,0.706628074007795,0.0687461691131896,0.447769118973371,-0.034635188501078,0.145704618046069,0.235341130300345,0.355662831562116,0.452704365836936,0.425568671435715,0.415178623864929,0.458921282448062,-0.0930976181570613,0.0402927741660049,0.0642852205481557,0.213858693685801,0.0744699561458779,0.46481169381877,0.290703386280766,-0.0589291677485508,-0.117143633991732,-0.117143633991732,-0.117143633991732,0.345371056701859,0.348665726471704,0.345076280393604,0.386964742987672,0.312620407421525,0.342867396214416,0.325397258212366,0.315064987149745,0.431919932515335,0.327578794609635,0.261573782299979,0.22848517036173,0.203450888078486,0.333125984711861,0.232217378557329,0.0237169333977082,-0.0643447805159143,-0.055765815501966,0.197192995508358,-0.00824040962737884,0.0313962276635557,0.189130490880528,0.168357176969547,0.213114573072356,0.284478193225197,0.403698167286794,0.347593600189078,0.366947579919834,0.417450266759596,0.471939986649102,0.442815657067102,0.563505001255987,0.554581980539552,-0.0364972975539748,0.0346339237643104,-0.0843653055472786,-0.0096500931139648,0.0290586842313354,0.0387293839646611,-0.0397157873732176,0.002115299534804,0.0713181364293496,-0.0113574885684831,-0.0743733090942826,-0.0523847261066632,-0.0574302397766388,-0.108334913872774,-0.0256329695314788,-0.0405509848236627,0.0107042091964787,-0.106162294692255,-0.0209399404892681,0.0749197051621931,0.162481433812535,0.0576414993749398,0.170669418785225,-0.0290269353677375,0.258954608671129,-0.117143633991732,0.36033024190525,0.0731749418172188,0.0719394945759494,0.0760405820977809,0.0875560121158703,0.135972297291481,0.215276052476143,0.372585678736593,0.32423659438886,0.269038851066118,0.261757695476108,0.510646295354388,0.525267446816769,0.233898071999495,-0.117143633991732,-0.117143633991732,0.282919451329052,0.339395257186348,0.0670007929560687,0.0445362696819499,-0.0141636707670061,1.40770524646207,0.0207434927019379,-0.0175541627875142,-0.0412576297346233,-0.0503370546076202,-0.0417181895691358,-0.038643572846548,0.0476705548622471,0.0762751281798276,0.084409205026823,0.00953942990669054,0.231087609880899,0.204444720250235,0.292839252190467,0.374488187617286,-0.0804555721860841,-0.0450304098241362,-0.0736619007920672,-0.102136117596585,0.104881020995633,0.0297841787565058,0.174515002026158,-0.0530129382137103,0.311244930886778,0.231459893905122,-0.0546156773611192,0.0238027418947901,-0.0670953615629006,-0.0406247172554569,-0.0566662279210626,-0.0428036914754884,-0.0130174001698496,0.0244179894443029,0.00896839274663674,0.0400084833353611,0.11642591778786,0.0375026922235273,0.714574750432413,0.965048547569881,0.684818713149025,0.494268486901411,0.361789557224173,0.366513061109156,0.358781705107458,0.235789253204956,0.0293431131547037,-0.0417541383147903,-0.0123219064425095,-0.0483537885055146,-0.0306720105447265,-0.0558039331266766,-0.0865387187970042,-0.105766362748454,-0.117143633991732,0.783965933476967,-0.0515469835324421,0.153171570449837,0.2838684288572,0.393138259078597,0.455988975212511,0.790596821715664,0.867381522331258,0.920288943715381,0.716526455267624,0.0768349044576618,-0.0741509922393084,-0.0130033376425939,-0.0205569896768515,0.0317503280702745,0.0115479094914311,0.0124017526853155,0.00124299047289387,0.039346586237841,-0.00632165472984296,-0.00562928592763013,0.522518424214584,0.092789332929838,-0.0457577766650031,-0.00938423376782723,0.0764698366260587,0.109373722535369,0.158403692941115,0.0984932608497145,0.103105305960004,0.130198926698088,0.0253922643009045,0.0169163964761807,0.114487940091301,0.0316534901834204,0.0470304432203106,1.03707649925049,-0.117143633991732,-0.095894246896876,-0.0868557033596728,1.62128086801745,0.707993112109838,0.40285549886659,0.448267444377838,0.833563608241027,-0.0843157943934197,-0.0887988002360495,-0.0457331780458748,-0.0347182661140458,-0.0150703984095723,-0.0257585990946724,-0.0576339516161961,-0.0477262040616169,-0.06010271583593,-0.0455662230518254,-0.00731196425420743,-0.0173813263754013,0.0971787689987511,0.360140892122531,0.285371862293703,0.411617106795008,0.703195709748598,0.676876478378633,0.683510865081842,0.710928391545063,0.724730285180263,0.669665220248139,0.705920339912027,0.707467728526244,0.713752216947544,0.73066600148676,0.693025234853498,0.680314612504925,0.719113235982754,0.729610792393364,0.670356692729177,0.657125841883881,0.638714399988602,0.719776613710917,0.708309024220599,0.682973828867656,0.716293102450164,0.697922355539693,0.714443939062122,0.708164206489354,0.713196903360206,0.700604693885662,0.617147555210885,0.687090289528676,0.58633034873368,0.55228140195598,0.708329952827636,0.826311902606656,1.03058646866958,0.890227311450844,0.957970183867788
|coexpression_dpi_cluster_scores_median=-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,0.0986886653414259,-0.0064451510671192,0,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0093704970097183,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.00540972069630005,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,0,-0.0263777085807213,-0.00704890691413915,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,0.051331151415961,0.12210323440884,0.00249235659751759,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,0,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,0,0,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,0,0,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,0,0,0,-0.0263777085807213,0,-0.0263777085807213,0,0,0,0,0.0258757024206915,0,0,0,0,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,0.977890506104795,0,0,0,0,0.332178567903727,0,0,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,0.266565922116508,0.100004302423367,0,0,0,0,0,0.0917293418104957,0,0.0970519761804736,0.548290380953396,0.588300731137142,0.558691815728035,0.859556852805788,0.710111629003198,0.456960520238567,0,0,0.305203137598179,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,0,0,0,0,0,0.0819907263755358,0.0219612200437415,0.0541328768414149,0.535798953573705,0.00314847467159383,0.352229820493269,0,0.000845586994935365,0.0719048733411253,0.11182972446806,0.16165357500581,0.187288422836706,0.192956886603162,0.388997806485204,0,0.0376102998814686,0.0384136280321548,0.122098026175986,0,0.12977112683364,0.0406344227647811,-0.00636321160789925,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,0.203234922358583,0.312181481819591,0.133578543252831,0.20070131277171,0.144115843815369,0.206743095739813,0.171469084247356,0.0768351758169297,0.172146504919362,0.123564095038589,0.171271781306718,0.125185406280938,0.157940044576385,0.188922943191418,0.183725802626263,0,0,0,0.108257023583395,0,0,0.120770531187269,0.142639414080017,0.190882538044845,0.188775724159973,0.312301929773578,0.320277951859469,0.238788769098255,0.282045316888746,0.390613642357679,0.421916321831888,0.398574339965878,0.458845210475927,0,0.0234910315133595,-0.0263777085807213,0,0,0.0420388726120206,0,0,0.0353566432075167,0,0,0,0,-0.0263777085807213,0,0,0,-0.0263777085807213,0,0,0,0.0529067487429064,0.078925378284565,0,0.102407027923695,-0.0263777085807213,0.323977547865839,0.0376806553706894,0.0327833179115153,0.060908164711044,0.0194013004471317,0.040881508336374,0.130923996037535,0.171618709493336,0.250716117399462,0.217377119623727,0.184300799846921,0.321433871876684,0.289556555146521,0.13015544435133,-0.0263777085807213,-0.0263777085807213,0.240318128921259,0.34877414325215,0,0,0,1.38770684957771,0,0,0,0,0,0,0,0,0,0,0.174672227084221,0.0711694759496908,0.122469471105573,0.297316221554094,-0.0170831945505683,0,-0.0263777085807213,-0.0263777085807213,0,0.0162625430939682,0.180944521652268,0,0.0216930599634409,0.211637019071799,-0.0263777085807213,-0.0263777085807213,-0.00077155749426938,0,0,-0.00360938882958222,0,0,0,0,0.0638809237482694,0,0.715407216585542,1.06879869153546,0.323382477162569,0.262501249574271,0.109249469730172,0.213631154081559,0.317280828877244,0.0474964841099225,0.0685090053637401,0,0,0,0,-0.021787956955221,-0.0263777085807213,-0.0263777085807213,-0.0263777085807213,0.608605671123927,0,0.11428178837956,0.279566161619625,0.25587940599488,0.345974989066259,0.704619956894659,0.728887685765464,0.680668574033201,0.572707582499338,0,0,0,0,0,0,0,0,0,0,0,0.471333671317128,0.059629779596053,0,0,0.0237802716726586,0,0.0787037500278776,0.0457309476173448,0.0620774433902836,0.0945498394604214,0.011436625046574,0,0.0762895800463332,0,0,0.93307205068781,-0.0263777085807213,-0.0263777085807213,0,1.6975119588055,0.749803787673676,0.447183081649754,0.154952218286625,0.900855348787825,-0.0263777085807213,-0.0263777085807213,0,0,0,0,-0.00185120466981053,-0.0149005501904502,0,0,0,0,0.0684580848992459,0.0472542065752338,0.0826465040380816,0.132027310761714,0.339647678520803,0.39526793072209,0.414593663768489,0.408568773230338,0.375173740431936,0.320771214626958,0.337061861110367,0.360776329046707,0.369939292411797,0.405719584143385,0.387470470548831,0.326278861444743,0.391274406195268,0.403662108451116,0.436532867953236,0.333164415153839,0.314498690788484,0.362638585132375,0.370188673248754,0.342857838717054,0.392079388044666,0.446395070386271,0.43188376461775,0.536699418259425,0.374358841215331,0.392116268746414,0.148982201447044,0.328894932741822,0.213660378024938,0.143492889519683,0.307474444460258,0.406666072903488,0.646263697771858,0.637258321617993,0.647390408551165
|gostat_on_MCL_coexpression=GO:0030018;Z disc;0.0420970190112459;118449!GO:0031674;I band;0.0420970190112459;118449!GO:0030017;sarcomere;0.0420970190112459;118449!GO:0044449;contractile fiber part;0.0420970190112459;118449!GO:0030016;myofibril;0.0420970190112459;118449!GO:0043292;contractile fiber;0.0420970190112459;118449!
|gostat_on_MCL_coexpression=GO:0030018;Z disc;0.0420970190112459;118449!GO:0031674;I band;0.0420970190112459;118449!GO:0030017;sarcomere;0.0420970190112459;118449!GO:0044449;contractile fiber part;0.0420970190112459;118449!GO:0030016;myofibril;0.0420970190112459;118449!GO:0043292;contractile fiber;0.0420970190112459;118449!
}}
}}

Revision as of 12:46, 11 October 2012


Phase1 CAGE Peaks

 Short description
Mm9::chr3:122815808..122815822,-p5@Synpo2
Mm9::chr3:122816485..122816496,-p@chr3:122816485..122816496
-
Mm9::chr3:122816679..122816709,-p@chr3:122816679..122816709
-
Mm9::chr3:122817391..122817413,-p@chr3:122817391..122817413
-
Mm9::chr3:122819903..122819914,-p@chr3:122819903..122819914
-
Mm9::chr3:122819931..122819969,-p@chr3:122819931..122819969
-
Mm9::chr3:122820175..122820184,-p@chr3:122820175..122820184
-
Mm9::chr7:74904621..74904645,-p1@Synm
Mm9::chrX:54032853..54032872,+p3@Fhl1
Mm9::chrX:54032876..54032895,+p2@Fhl1


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0030018Z disc0.0420970190112459
GO:0031674I band0.0420970190112459
GO:0030017sarcomere0.0420970190112459
GO:0044449contractile fiber part0.0420970190112459
GO:0030016myofibril0.0420970190112459
GO:0043292contractile fiber0.0420970190112459



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:746&oldid=2150032"