Personal tools

MCL coexpression mm9:3058: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9
|coexpression_dpi_cluster_scores_mean=-0.00351372320173866,-0.267265698400109,-0.207735388073787,-0.378435877322632,-0.395118260448483,-0.544794637774834,-0.475706090312056,-0.569123498550234,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.438882478724327,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.568102567296312,-0.535494354725485,0.268854369957911,-0.519049396417012,-0.553109328190504,-0.008809696996185,0.045315186638948,-0.305044368384355,-0.243651388932,-0.278839311277414,0.214095843710855,-0.135343164020216,0.047251098497717,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,0.262816364560415,0.159650504848863,-0.46708616713984,0.0720071610273957,-0.558151871994388,-0.52920522206446,-0.560983735962206,-0.27521421493013,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.553562323415689,-0.282573354946443,-0.391158299854707,-0.560031026994276,-0.58670395801244,-0.515634878252289,-0.436896308925094,-0.0625203598679127,-0.532919630024272,-0.487168757126745,-0.58670395801244,-0.425909911340181,-0.539635761951006,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.484909710892973,-0.392564686264449,-0.554982980563143,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.55377950345499,-0.493056302201611,-0.58670395801244,-0.561358075640398,-0.58670395801244,-0.45119235090448,-0.457441950053111,-0.456869461936171,-0.26593373391691,-0.209364762479297,-0.476534530377105,-0.525132261267963,-0.532572648311425,0.0907536394900963,0.279177003346923,-0.511603334286112,-0.480724167073332,-0.215907559524504,-0.289415862853894,0.369408260115182,1.03569390065441,0.928375859533023,0.757445158857072,-0.134408819085741,1.46698916690093,1.3553649719329,0.616846106902942,-0.58670395801244,-0.554012030077647,-0.58670395801244,0.0749358395343546,0.810632765039795,-0.0088430049054242,0.00340732664055453,0.228523639540773,0.130706880521675,0.153355808482707,0.375022915568877,-0.0734630928250771,-0.291388228794098,0.769482313289776,0.400876308706578,0.834157207807082,0.622617449634838,0.619987912223228,-0.0338148577610823,0.244438057307793,0.0843732001865687,-0.0713974215751464,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.114019099024752,0.0702480825412356,-0.537114117888628,0.0622415826032547,0.0619092798486342,-0.27635853692411,-0.0362296052031097,0.676740383672091,0.569813099164785,0.0136366491076684,0.575135817797237,-0.444849803597917,-0.0222539569116052,0.223310387546467,0.592244787065053,0.560352902410632,0.420147051351434,0.284396155943256,0.725096371206406,-0.58670395801244,-0.193252132056077,0.081171128226647,0.456693022104303,0.732123113982776,0.970048897311674,1.02828231827753,-0.225265364414162,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.486352850092578,-0.432462578789992,-0.226010029401404,0.171068564966494,0.105098731770492,0.204331346843253,0.128663102311762,0.0779340638060125,0.224795100419322,0.270568615898518,0.408135569733755,0.402139602630898,0.336103273766823,0.486022093753291,0.358875717094148,-0.376711808018053,-0.533576408937118,-0.545374502123393,-0.0584387876260647,-0.0260242664613763,0.104656386477837,0.405439920149508,0.411051026192443,0.430331223159329,0.353404569107513,0.219954128529025,0.258974384381641,0.566127173160995,0.586408804465104,0.585102755585072,0.309015069405388,0.349747507217745,0.180055361465252,-0.147071232578462,-0.025299523159656,-0.0927647115593956,-0.0726402161777992,-0.202624282735888,-0.162948101140282,0.0883076684379534,0.0443164835471287,0.164139389269193,0.0748829619266152,0.125903028017169,-0.410457736417437,-0.348651190794196,-0.448268888151356,-0.424657926113496,-0.374410231496017,-0.300746170937387,-0.391867947391295,-0.2830464337047,-0.358782611832297,0.022095773523649,0.110567171171103,0.189359388387357,-0.0103564810218288,-0.048910357540503,-0.0205386761969717,0.829006563800632,0.0677898669749707,0.485157202022011,0.49287892602556,0.608733273857243,0.515824491506888,0.548577121712422,0.35400649021847,0.774146895021605,0.778695164210006,0.781007913329132,0.860022936476963,0.743472427977344,0.778165886702214,-0.58670395801244,-0.58670395801244,-0.0133754213813916,0.0669109345919027,-0.344270924116385,-0.29015364884078,-0.58670395801244,0.821480338168291,-0.547006102698428,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.53848269466713,0.655248096925536,0.459084727496856,0.377556463643039,0.43307546693317,0.815259196683529,0.243815500856409,0.0150012145459821,0.112807108787261,0.293411799504622,0.429483524296822,0.486497084365553,0.388793115687741,0.357483485303872,0.39197354121408,0.407847934286569,0.182626484408254,0.228698305474244,-0.226029887443787,-0.370706794460968,-0.447872100721149,-0.262462839397508,-0.0371538526366958,0.285881184194719,0.309320833131814,-0.0593164310910682,-0.332262666016436,-0.535568109190766,0.15513438400754,0.845121542641462,0.745615114828094,0.679254278242698,0.650339262861124,0.704529791177887,0.416015431268915,-0.135798291773731,-0.0229640630146982,0.356174801963059,0.217127698180962,0.153193432013438,0.0755572692608037,0.00388198622292477,-0.58670395801244,-0.567741839273644,-0.58670395801244,0.363481474841717,0.271177838547222,0.708402182953502,0.741138315983503,0.875759728009743,0.87058211796996,0.981061592098109,1.04577451502524,0.683902935373104,0.147174259720754,-0.015688986610573,-0.457269641355814,-0.269843759518112,-0.36895112362756,-0.0543164078915352,0.02924622812884,0.276232564144648,0.484177464480043,0.401778182978871,0.305579843870554,-0.0201462265834843,0.0505283489585196,-0.1064391232341,-0.0330357121588559,0.11051897761215,-0.0975700347346541,-0.0312338050006695,-0.188449579095211,-0.267343124415139,-0.278248916779005,-0.172391414095197,-0.345885304433761,-0.326394971483659,-0.314427401430239,-0.330347059882347,-0.354579579905608,0.78032518751844,-0.58670395801244,-0.58670395801244,-0.58670395801244,0.586879041137673,0.802222423290306,0.662289709770825,0.595911407503922,0.243550557523469,-0.201569778199785,-0.340083033553321,-0.231564575398221,-0.283400552609102,0.00790573662014917,-0.0564780550800667,-0.104310153554954,0.131122964610764,-0.177991964353467,-0.0582034360033147,-0.545104152903851,-0.186222402409547,0.189907182809851,0.630673366093695,0.0426382924594964,0.298440730274676,0.606812748072517,0.668593930547798,0.648801139945404,0.603996655426641,0.662614015550619,0.709607898791711,0.623571611959926,0.621771158524647,0.632407469997647,0.618917730485499,0.47418899613598,0.595781307097706,0.640261661524054,0.65338639654951,0.554662760252921,0.595148685766174,0.618848534764184,0.624037805665431,0.586245390854512,0.606614287337019,0.599603531460224,0.629227150268954,0.540258182679716,0.568241601481982,0.552659280600252,0.492219219560481,0.613593083372223,0.583769613731991,0.674882181235442,0.415209517606568,0.674237621590997,0.670849372939722,0.827043754745363,0.971937958878761,0.941332226169305
|coexpression_dpi_cluster_scores_mean=-0.00351372320173866,-0.267265698400109,-0.207735388073787,-0.378435877322632,-0.395118260448483,-0.544794637774834,-0.475706090312056,-0.569123498550234,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.438882478724327,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.568102567296312,-0.535494354725485,0.268854369957911,-0.519049396417012,-0.553109328190504,-0.008809696996185,0.045315186638948,-0.305044368384355,-0.243651388932,-0.278839311277414,0.214095843710855,-0.135343164020216,0.047251098497717,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,0.262816364560415,0.159650504848863,-0.46708616713984,0.0720071610273957,-0.558151871994388,-0.52920522206446,-0.560983735962206,-0.27521421493013,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.553562323415689,-0.282573354946443,-0.391158299854707,-0.560031026994276,-0.58670395801244,-0.515634878252289,-0.436896308925094,-0.0625203598679127,-0.532919630024272,-0.487168757126745,-0.58670395801244,-0.425909911340181,-0.539635761951006,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.484909710892973,-0.392564686264449,-0.554982980563143,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.55377950345499,-0.493056302201611,-0.58670395801244,-0.561358075640398,-0.58670395801244,-0.45119235090448,-0.457441950053111,-0.456869461936171,-0.26593373391691,-0.209364762479297,-0.476534530377105,-0.525132261267963,-0.532572648311425,0.0907536394900963,0.279177003346923,-0.511603334286112,-0.480724167073332,-0.215907559524504,-0.289415862853894,0.369408260115182,1.03569390065441,0.928375859533023,0.757445158857072,-0.134408819085741,1.46698916690093,1.3553649719329,0.616846106902942,-0.58670395801244,-0.554012030077647,-0.58670395801244,0.0749358395343546,0.810632765039795,-0.0088430049054242,0.00340732664055453,0.228523639540773,0.130706880521675,0.153355808482707,0.375022915568877,-0.0734630928250771,-0.291388228794098,0.769482313289776,0.400876308706578,0.834157207807082,0.622617449634838,0.619987912223228,-0.0338148577610823,0.244438057307793,0.0843732001865687,-0.0713974215751464,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.114019099024752,0.0702480825412356,-0.537114117888628,0.0622415826032547,0.0619092798486342,-0.27635853692411,-0.0362296052031097,0.676740383672091,0.569813099164785,0.0136366491076684,0.575135817797237,-0.444849803597917,-0.0222539569116052,0.223310387546467,0.592244787065053,0.560352902410632,0.420147051351434,0.284396155943256,0.725096371206406,-0.58670395801244,-0.193252132056077,0.081171128226647,0.456693022104303,0.732123113982776,0.970048897311674,1.02828231827753,-0.225265364414162,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.486352850092578,-0.432462578789992,-0.226010029401404,0.171068564966494,0.105098731770492,0.204331346843253,0.128663102311762,0.0779340638060125,0.224795100419322,0.270568615898518,0.408135569733755,0.402139602630898,0.336103273766823,0.486022093753291,0.358875717094148,-0.376711808018053,-0.533576408937118,-0.545374502123393,-0.0584387876260647,-0.0260242664613763,0.104656386477837,0.405439920149508,0.411051026192443,0.430331223159329,0.353404569107513,0.219954128529025,0.258974384381641,0.566127173160995,0.586408804465104,0.585102755585072,0.309015069405388,0.349747507217745,0.180055361465252,-0.147071232578462,-0.025299523159656,-0.0927647115593956,-0.0726402161777992,-0.202624282735888,-0.162948101140282,0.0883076684379534,0.0443164835471287,0.164139389269193,0.0748829619266152,0.125903028017169,-0.410457736417437,-0.348651190794196,-0.448268888151356,-0.424657926113496,-0.374410231496017,-0.300746170937387,-0.391867947391295,-0.2830464337047,-0.358782611832297,0.022095773523649,0.110567171171103,0.189359388387357,-0.0103564810218288,-0.048910357540503,-0.0205386761969717,0.829006563800632,0.0677898669749707,0.485157202022011,0.49287892602556,0.608733273857243,0.515824491506888,0.548577121712422,0.35400649021847,0.774146895021605,0.778695164210006,0.781007913329132,0.860022936476963,0.743472427977344,0.778165886702214,-0.58670395801244,-0.58670395801244,-0.0133754213813916,0.0669109345919027,-0.344270924116385,-0.29015364884078,-0.58670395801244,0.821480338168291,-0.547006102698428,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.58670395801244,-0.53848269466713,0.655248096925536,0.459084727496856,0.377556463643039,0.43307546693317,0.815259196683529,0.243815500856409,0.0150012145459821,0.112807108787261,0.293411799504622,0.429483524296822,0.486497084365553,0.388793115687741,0.357483485303872,0.39197354121408,0.407847934286569,0.182626484408254,0.228698305474244,-0.226029887443787,-0.370706794460968,-0.447872100721149,-0.262462839397508,-0.0371538526366958,0.285881184194719,0.309320833131814,-0.0593164310910682,-0.332262666016436,-0.535568109190766,0.15513438400754,0.845121542641462,0.745615114828094,0.679254278242698,0.650339262861124,0.704529791177887,0.416015431268915,-0.135798291773731,-0.0229640630146982,0.356174801963059,0.217127698180962,0.153193432013438,0.0755572692608037,0.00388198622292477,-0.58670395801244,-0.567741839273644,-0.58670395801244,0.363481474841717,0.271177838547222,0.708402182953502,0.741138315983503,0.875759728009743,0.87058211796996,0.981061592098109,1.04577451502524,0.683902935373104,0.147174259720754,-0.015688986610573,-0.457269641355814,-0.269843759518112,-0.36895112362756,-0.0543164078915352,0.02924622812884,0.276232564144648,0.484177464480043,0.401778182978871,0.305579843870554,-0.0201462265834843,0.0505283489585196,-0.1064391232341,-0.0330357121588559,0.11051897761215,-0.0975700347346541,-0.0312338050006695,-0.188449579095211,-0.267343124415139,-0.278248916779005,-0.172391414095197,-0.345885304433761,-0.326394971483659,-0.314427401430239,-0.330347059882347,-0.354579579905608,0.78032518751844,-0.58670395801244,-0.58670395801244,-0.58670395801244,0.586879041137673,0.802222423290306,0.662289709770825,0.595911407503922,0.243550557523469,-0.201569778199785,-0.340083033553321,-0.231564575398221,-0.283400552609102,0.00790573662014917,-0.0564780550800667,-0.104310153554954,0.131122964610764,-0.177991964353467,-0.0582034360033147,-0.545104152903851,-0.186222402409547,0.189907182809851,0.630673366093695,0.0426382924594964,0.298440730274676,0.606812748072517,0.668593930547798,0.648801139945404,0.603996655426641,0.662614015550619,0.709607898791711,0.623571611959926,0.621771158524647,0.632407469997647,0.618917730485499,0.47418899613598,0.595781307097706,0.640261661524054,0.65338639654951,0.554662760252921,0.595148685766174,0.618848534764184,0.624037805665431,0.586245390854512,0.606614287337019,0.599603531460224,0.629227150268954,0.540258182679716,0.568241601481982,0.552659280600252,0.492219219560481,0.613593083372223,0.583769613731991,0.674882181235442,0.415209517606568,0.674237621590997,0.670849372939722,0.827043754745363,0.971937958878761,0.941332226169305
|coexpression_dpi_cluster_scores_median=0.0397757351449758,-0.271243548560592,-0.196624828367568,-0.43139552725807,-0.378626126444247,-0.651304736387807,-0.545338826825528,-0.659094249989484,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.490103409443934,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.558206818515237,0.364151615004967,-0.57406901231434,-0.676248807634815,-0.123019169365226,-0.042467742399926,-0.271243548560592,-0.173311023787739,-0.271243548560592,0.0889265086982985,-0.0807581517505708,-0.0497793548672469,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.711835628376104,0.2743483111427,0.15661757649507,-0.418179324482824,-0.0202404840834578,-0.626179370321948,-0.625587524454133,-0.699872030949921,-0.348924308411168,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.677607793310372,-0.2773943746428,-0.371000976747973,-0.697013904046133,-0.711835628376104,-0.498628389095649,-0.487124154745084,-0.268011223734656,-0.550482644411598,-0.47842709444354,-0.711835628376104,-0.498553398220835,-0.570631040191801,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.602712541685075,-0.491046383444018,-0.616672696028212,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.678259333428273,-0.595489248087771,-0.711835628376104,-0.673816804818041,-0.711835628376104,-0.519166164612144,-0.51794261643711,-0.54796053810679,-0.290970767061231,-0.225254631319757,-0.518934265340825,-0.592317606867193,-0.614638767997578,0.101573562104078,0.242692535287716,-0.551730825921641,-0.459093324283301,-0.22083809936872,-0.271243548560592,0.287662162385488,0.961983217602868,0.788603239575806,0.667779358396018,-0.114391460935518,1.42901585175293,1.41364148840151,0.928287911724118,-0.711835628376104,-0.613759844571723,-0.711835628376104,0.0820999121794519,0.859305848289777,0.0150419024461177,0,0.376839809648463,0.118457043880798,0.176644859764788,0.37766380684046,-0.0946606831860519,-0.316829209480548,0.861578454044038,0.414768072297595,0.855334780651547,0.557537436104379,0.554290401749423,-0.254875108137536,0.237802271080118,0.0822264777484059,-0.0289821930854475,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.126823847426617,0.118528460813405,-0.614471162805211,0.105225630511893,0.0347226709316008,-0.319136818271128,-0.0132756247458742,0.700439017730397,0.613555418902441,0.0323798518394862,0.614549767263473,-0.595051479086806,0.0214624584144694,0.215213408206496,0.601855020005893,0.533699390048627,0.420268526030173,0.3000083612794,0.753527402885678,-0.711835628376104,-0.215039167966172,0.0417176122883824,0.441803141961433,0.743415566619362,1.00286971172151,1.06375959449332,-0.181839519561062,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.56130896649631,-0.480473559542432,-0.264581347164369,0.144085797413496,0.10170523039038,0.15296913271886,0.10644403218712,0.0785039167448848,0.236415565422004,0.247775182161422,0.428202739300439,0.435904933835622,0.355331940721033,0.50795992168631,0.400245332478772,-0.511941214543248,-0.669297675417961,-0.653044329433484,-0.0868641459728183,-0.027063088082046,0.107775372873007,0.407780438527061,0.408212751373667,0.427970008365603,0.340172433614109,0.308963922579646,0.268819634308682,0.582160601052696,0.651478605404403,0.608026650300742,0.296542253996097,0.418794679137829,0.270483786419581,-0.222390888489134,-0.0160338787683464,-0.135436439098292,-0.0825870084841674,-0.215809067353419,-0.151077748140843,0.0926517584157348,0.067388456949497,0.0850956465343797,0.101183983322615,0.172600576093289,-0.535589406781101,-0.336005100807855,-0.449814688706955,-0.453811558412987,-0.3682526036134,-0.355211496287739,-0.389913376767959,-0.284585511266739,-0.289021234745799,0.136166900203509,0.130414993219605,0.186975066498433,-0.00929635552136832,-0.0523032738378711,0.015867579906036,0.828836990385299,0.0609829369319789,0.469377573863891,0.488640438033173,0.607928452136593,0.463906074108869,0.549993173840268,0.392242222708837,0.781107285074923,0.771074391871602,0.788061892896976,0.90446877951782,0.714989558195004,0.739142835259713,-0.711835628376104,-0.711835628376104,0.0603131132882231,0.0724240889051956,-0.45589941348378,-0.374986033769048,-0.711835628376104,0.787149724565514,-0.657939131158589,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.711835628376104,-0.632368907064694,0.693347094200903,0.454417258609423,0.34637876596624,0.464495251814343,0.878220954171549,0.235473818608504,0.0181428183452397,0.128710001085902,0.293023263356919,0.443153599778262,0.483429100835052,0.371395171583458,0.448054698980273,0.510513608563936,0.494763815817823,0.243646514092426,0.235053303228771,-0.293782464327766,-0.476245481663962,-0.495196505619725,-0.352755182843566,-0.0541293307198093,0.219410711909979,0.297060610344325,-0.0647064264475582,-0.330173690382097,-0.623625150635602,0.182279877995351,0.887482596730161,0.867666199321223,0.727139597357559,0.712158252876079,0.800248834549457,0.454218825173172,-0.229008002110114,-0.014775531213729,0.318640864791154,0.21122123461039,0.146470470341009,0.134163940429721,-0.043407703526833,-0.711835628376104,-0.654949272159715,-0.711835628376104,0.524434538140175,0.245607286926456,0.70116837282611,0.765962892892385,0.856705820800103,0.934283056144612,1.05994678780627,1.08743661286152,0.718140009733776,0.0897566566199228,0.107185115924377,-0.517684153391164,-0.242939852977465,-0.345661565427231,-0.0586113994052345,0.112707837652974,0.316720303455631,0.456478043921419,0.35766720439704,0.22826637041254,0.035583816165458,0.0529525520179458,-0.0585174755219847,-0.0444710493738143,0.0903215968757727,-0.125444351141348,0.0121648846711379,-0.177125584358978,-0.345945369019268,-0.31792798427087,-0.140581804197823,-0.416152427180259,-0.348084469671519,-0.321928901975494,-0.34058170593628,-0.399681104820939,0.787969656797127,-0.711835628376104,-0.711835628376104,-0.711835628376104,0.673827885433495,0.805439739865104,0.649196246928711,0.55716817111539,0.245390311429349,-0.198750285723147,-0.271243548560592,-0.277476491276945,-0.336203932346792,-0.0139359690244552,0.0310750699284577,-0.0708464034739095,0.160257479404805,-0.262732344499808,-0.0900403563836163,-0.711835628376104,-0.154590808383663,0.212885852871797,0.652203127552089,0.0598714759933967,0.272270458006613,0.624002152621295,0.658452044032402,0.724571541706793,0.577014673512742,0.700473206839314,0.647632835788765,0.58939466149381,0.631854036135545,0.645490069508168,0.579876213876447,0.430026612884025,0.560452000564163,0.609191265965955,0.610777519753653,0.570833386145494,0.552808182436664,0.601013551381102,0.553962262936001,0.574875172304088,0.559644760878253,0.59758937426039,0.570374198210848,0.574476098142732,0.565923734029482,0.49408963169457,0.515001892357523,0.576310645632113,0.580252474638937,0.639249833626142,0.441673160230313,0.667021720674327,0.687241749705958,0.842222978315293,0.890709211999952,0.879522028997062
|gostat_on_MCL_coexpression=
|gostat_on_MCL_coexpression=
}}
}}

Revision as of 13:23, 11 October 2012


Phase1 CAGE Peaks

 Short description
Mm9::chr16:56477934..56477948,+p3@Abi3bp
Mm9::chr16:56477951..56477973,+p2@Abi3bp
Mm9::chr16:56477980..56478004,+p1@Abi3bp


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

no results for this coexpression

Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:3058&oldid=2152344"