Personal tools

MCL coexpression mm9:3547: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9
|coexpression_dpi_cluster_scores_mean=-0.0851575476763553,0.376669467852762,0.320232345607417,0.178294415655807,0.397732475917181,-0.405087832464903,-0.378111378909888,-0.85940541941785,-0.539522756837849,-0.174419323040977,-1.00253064179887,-0.974348915183178,-0.999407608719,-0.940170100010743,-0.961917892576463,-0.789729126377407,-0.968382837932133,-0.967872693947753,-1.01007935175717,-0.875074989597677,-0.176607554840897,-0.436239152670339,-0.611220132703409,-0.0545615820296836,0.050623991335881,0.326773125140919,0.162266824964937,0.0810725230994543,0.522515141038915,0.293731773248571,0.243398604201691,-1.04516183163977,-1.04516183163977,-1.04516183163977,-0.622596288948957,-0.715987979564472,-0.677384332689487,-0.994548823561187,-0.870406147518833,-1.04516183163977,-1.04516183163977,-1.04516183163977,-1.04516183163977,0.326143832567685,0.236722252008418,0.166908398525785,-0.236859757283564,0.138844991471135,0.0567657967184428,0.063958234760193,0.261946462870002,0.260586227442941,-1.02270783090178,-0.693636436174274,-0.869791977099937,1.12286652591074,0.813810165376376,0.871724656273617,-0.515942713445042,-0.513759789775782,-0.494251651611102,0.294737273280297,0.0512516220712527,0.10338773279619,0.153560882920221,-0.0366347441954467,-0.110844223838822,-0.24117730513946,-0.427065645725922,-0.459903725388047,-0.387841706450832,-0.438033562303654,-0.31681620994446,-0.494928998821169,-0.484327407382689,-0.386666421046972,-0.83388868874322,-0.81821417649986,-0.841102292859753,-0.672997962040364,-0.537425272942056,-0.558446162365995,-0.90096231386614,-0.765331841633107,-0.705269033938319,-0.274333644759346,-0.312647589441391,-0.512144609317533,0.93056054768036,0.535667389987879,-0.134464170670097,-0.618999576725437,-0.779884690248297,-1.04516183163977,-0.972686801194347,-1.04516183163977,-0.141272092756861,0.705363509886995,0.748541801951767,0.803875796785787,-0.378058216093738,0.447106822612382,-0.0219965459191151,-0.221167304602658,0.708688692253004,0.740317780683527,0.73761492928758,-0.0724826248515459,-0.584925654893223,-0.226931924550848,-0.0971904351215239,0.15492303676386,0.190956374431768,0.0518780054680907,0.115128778478955,-0.108476433105672,0.856104622553783,-0.0610211849563334,-0.216595097530452,0.466178613747202,0.0506097816790693,0.0682945293878233,0.90382378150736,-0.911706419873353,-0.868965075440433,0.397658886854867,0.338982110134591,-0.0143473029736301,0.252710875008046,-0.8362415311035,-1.04516183163977,-0.676281797774737,-0.838323917926373,-0.89662667167408,-0.88744837016127,-0.873183215763287,0.325669648812797,0.082479452624151,-0.430010045052838,0.274249577966717,-0.419007662095821,-0.0759280038482638,0.0195386351491485,0.237236189133484,0.217853787292921,0.0869457237904183,0.117060990376115,0.268968238773516,-0.209351418366273,0.0337849707533089,0.302309639431784,0.514384465717506,0.796324092470074,0.657451776305396,0.634083307513435,0.122955193909351,-0.0030708432920216,-0.046836252143986,-0.0811180049881881,-0.188769276999989,-0.0130834345034354,0.0295116918106345,0.0811176231337393,0.0591593229246287,0.149601485186775,0.204933147095178,0.15938939268788,0.192881602935144,0.220764867895192,0.367443201144322,0.146955391578305,0.116349795297216,0.172579017140893,0.152830322180479,-0.874695182411777,-0.466156745224179,0.636763294056444,0.349953945138323,-0.355970121219014,-0.270555962408787,0.00520714300579,0.029226087845735,0.0354129240313654,0.119974445666862,0.25918471564512,0.13757857300983,0.0971586609759283,0.0790227577736717,0.0915592896512401,0.279193154642806,0.397066327069982,0.34290699069319,-0.0783797462188041,-0.0523551834854261,-0.0573234218997457,0.128908524589065,0.0600178481503007,0.041711921405909,0.0627109840216137,-0.210724408446852,-0.155793095413715,-0.29414837369388,-0.864561013540953,-0.637654269091577,-0.616474672144914,-0.799959629157827,-0.650111021694549,-0.634650177646222,-0.489675626869754,-0.38028335219301,-0.656086291119955,-0.447581362385892,-0.167914516731422,-0.280498103183516,-0.266338590124202,-0.569753380853228,-0.558433417278895,-0.581329427137052,0.24676377385097,0.0595524004991019,0.0560591813542857,0.180281989760427,0.359345002151229,0.407941818200786,0.392773157192583,0.527746201865693,0.389692643598159,0.485534566423901,0.414256842696948,0.359488445645772,0.345239096199272,0.282652155543777,0.512711701382726,0.200247952109319,-0.227584853734468,-0.090653128492548,-0.713236697412386,-0.793339339459898,0.612585179926892,0.246441458694653,-0.0728486597261153,-0.0088068438042635,-0.0688628417750196,-0.245795914242795,-0.121987734634141,-0.225046684158237,0.222625526676885,0.163454653804245,0.069254769665218,-0.84844157727055,-0.0678972199929256,0.224666062727603,0.17733150275832,-0.0487579388415767,-0.336935912123078,0.056145902628584,0.0215683114444962,0.0335573253315787,0.0347445051520717,0.185596099093567,0.311823732701189,0.133823149098617,0.161515164954818,-0.124552953352251,-0.118209500200707,-0.139018252481544,-0.261767142712978,-0.306048594697253,-0.218411591149418,-0.0251596729476514,0.0147177800753332,0.0473916002087951,0.0798475264709715,0.117863189766106,-0.175177611734434,0.101978725002076,-0.306901960837,0.297765500871738,0.544558437126603,0.52351901344603,0.703986188089532,0.800019923442948,0.195189005949409,-0.584155546328704,-0.570525870636975,0.311097249066913,0.229411598497576,-0.311673255471735,-0.494592809413515,-0.515267028632716,0.271589890731252,0.276760984902999,0.368726040746068,0.277897180945695,-0.426129546657382,0.136724440675394,0.542389587091988,0.903810593042441,0.600540918528794,0.471639896518495,0.276919738683821,0.289498765736918,0.985343145624389,-0.155571922799256,-0.935879741021483,0.0748975477478504,0.140663472908644,0.200492298581185,0.303691250450401,0.292504816346401,0.150228387872813,-0.118777311791924,-0.373314532483556,-0.61433163643869,-0.441339390792476,-0.494862449201379,-0.108690481983028,-0.0562586177862747,-0.194237238686239,-0.288339503247891,-0.222741572690524,-0.382218489098716,-0.340044164777419,-0.254102217269578,-0.3892066687273,-0.408328522234128,-0.478132611769563,-0.504048020635398,-0.431698013559192,0.397636999473534,-0.539677277224237,-0.795580206722137,-0.4607685098943,0.112093032057806,0.171197313036842,-0.0034726234025845,0.946389166924662,-0.308272684169868,-0.792256105452177,-1.04516183163977,-0.934632690021047,-0.946463656728223,-0.969621440486863,-1.04516183163977,-1.04516183163977,-0.991340432885693,-0.99105910578971,-0.849061233423057,-0.625428581310168,-0.184343439397223,0.0367507576863355,0.305492903382156,-0.1052296012306,0.0900252910419789,0.251895735321492,0.226664807817374,0.204688522771287,0.230289601446669,0.152667239962167,0.247617965887989,0.179635666718236,0.13048188898373,0.170196652820645,0.219846329727937,0.190900298004019,0.155360086724567,0.149819204783924,0.159771702513815,0.323973316871283,0.208171839833048,0.2146836156001,0.270393957025394,0.254672853679536,0.209918555373918,0.201411564764141,0.182221005291102,0.231068697944516,0.155258309439694,0.211652605313968,0.168329937052558,0.248152011504863,0.181890535459749,0.337928644420159,0.319849044322587,0.397087486985845,0.381993651286527,0.443801384722742,0.3940991725775,0.287051786638548
|coexpression_dpi_cluster_scores_mean=-0.0851575476763553,0.376669467852762,0.320232345607417,0.178294415655807,0.397732475917181,-0.405087832464903,-0.378111378909888,-0.85940541941785,-0.539522756837849,-0.174419323040977,-1.00253064179887,-0.974348915183178,-0.999407608719,-0.940170100010743,-0.961917892576463,-0.789729126377407,-0.968382837932133,-0.967872693947753,-1.01007935175717,-0.875074989597677,-0.176607554840897,-0.436239152670339,-0.611220132703409,-0.0545615820296836,0.050623991335881,0.326773125140919,0.162266824964937,0.0810725230994543,0.522515141038915,0.293731773248571,0.243398604201691,-1.04516183163977,-1.04516183163977,-1.04516183163977,-0.622596288948957,-0.715987979564472,-0.677384332689487,-0.994548823561187,-0.870406147518833,-1.04516183163977,-1.04516183163977,-1.04516183163977,-1.04516183163977,0.326143832567685,0.236722252008418,0.166908398525785,-0.236859757283564,0.138844991471135,0.0567657967184428,0.063958234760193,0.261946462870002,0.260586227442941,-1.02270783090178,-0.693636436174274,-0.869791977099937,1.12286652591074,0.813810165376376,0.871724656273617,-0.515942713445042,-0.513759789775782,-0.494251651611102,0.294737273280297,0.0512516220712527,0.10338773279619,0.153560882920221,-0.0366347441954467,-0.110844223838822,-0.24117730513946,-0.427065645725922,-0.459903725388047,-0.387841706450832,-0.438033562303654,-0.31681620994446,-0.494928998821169,-0.484327407382689,-0.386666421046972,-0.83388868874322,-0.81821417649986,-0.841102292859753,-0.672997962040364,-0.537425272942056,-0.558446162365995,-0.90096231386614,-0.765331841633107,-0.705269033938319,-0.274333644759346,-0.312647589441391,-0.512144609317533,0.93056054768036,0.535667389987879,-0.134464170670097,-0.618999576725437,-0.779884690248297,-1.04516183163977,-0.972686801194347,-1.04516183163977,-0.141272092756861,0.705363509886995,0.748541801951767,0.803875796785787,-0.378058216093738,0.447106822612382,-0.0219965459191151,-0.221167304602658,0.708688692253004,0.740317780683527,0.73761492928758,-0.0724826248515459,-0.584925654893223,-0.226931924550848,-0.0971904351215239,0.15492303676386,0.190956374431768,0.0518780054680907,0.115128778478955,-0.108476433105672,0.856104622553783,-0.0610211849563334,-0.216595097530452,0.466178613747202,0.0506097816790693,0.0682945293878233,0.90382378150736,-0.911706419873353,-0.868965075440433,0.397658886854867,0.338982110134591,-0.0143473029736301,0.252710875008046,-0.8362415311035,-1.04516183163977,-0.676281797774737,-0.838323917926373,-0.89662667167408,-0.88744837016127,-0.873183215763287,0.325669648812797,0.082479452624151,-0.430010045052838,0.274249577966717,-0.419007662095821,-0.0759280038482638,0.0195386351491485,0.237236189133484,0.217853787292921,0.0869457237904183,0.117060990376115,0.268968238773516,-0.209351418366273,0.0337849707533089,0.302309639431784,0.514384465717506,0.796324092470074,0.657451776305396,0.634083307513435,0.122955193909351,-0.0030708432920216,-0.046836252143986,-0.0811180049881881,-0.188769276999989,-0.0130834345034354,0.0295116918106345,0.0811176231337393,0.0591593229246287,0.149601485186775,0.204933147095178,0.15938939268788,0.192881602935144,0.220764867895192,0.367443201144322,0.146955391578305,0.116349795297216,0.172579017140893,0.152830322180479,-0.874695182411777,-0.466156745224179,0.636763294056444,0.349953945138323,-0.355970121219014,-0.270555962408787,0.00520714300579,0.029226087845735,0.0354129240313654,0.119974445666862,0.25918471564512,0.13757857300983,0.0971586609759283,0.0790227577736717,0.0915592896512401,0.279193154642806,0.397066327069982,0.34290699069319,-0.0783797462188041,-0.0523551834854261,-0.0573234218997457,0.128908524589065,0.0600178481503007,0.041711921405909,0.0627109840216137,-0.210724408446852,-0.155793095413715,-0.29414837369388,-0.864561013540953,-0.637654269091577,-0.616474672144914,-0.799959629157827,-0.650111021694549,-0.634650177646222,-0.489675626869754,-0.38028335219301,-0.656086291119955,-0.447581362385892,-0.167914516731422,-0.280498103183516,-0.266338590124202,-0.569753380853228,-0.558433417278895,-0.581329427137052,0.24676377385097,0.0595524004991019,0.0560591813542857,0.180281989760427,0.359345002151229,0.407941818200786,0.392773157192583,0.527746201865693,0.389692643598159,0.485534566423901,0.414256842696948,0.359488445645772,0.345239096199272,0.282652155543777,0.512711701382726,0.200247952109319,-0.227584853734468,-0.090653128492548,-0.713236697412386,-0.793339339459898,0.612585179926892,0.246441458694653,-0.0728486597261153,-0.0088068438042635,-0.0688628417750196,-0.245795914242795,-0.121987734634141,-0.225046684158237,0.222625526676885,0.163454653804245,0.069254769665218,-0.84844157727055,-0.0678972199929256,0.224666062727603,0.17733150275832,-0.0487579388415767,-0.336935912123078,0.056145902628584,0.0215683114444962,0.0335573253315787,0.0347445051520717,0.185596099093567,0.311823732701189,0.133823149098617,0.161515164954818,-0.124552953352251,-0.118209500200707,-0.139018252481544,-0.261767142712978,-0.306048594697253,-0.218411591149418,-0.0251596729476514,0.0147177800753332,0.0473916002087951,0.0798475264709715,0.117863189766106,-0.175177611734434,0.101978725002076,-0.306901960837,0.297765500871738,0.544558437126603,0.52351901344603,0.703986188089532,0.800019923442948,0.195189005949409,-0.584155546328704,-0.570525870636975,0.311097249066913,0.229411598497576,-0.311673255471735,-0.494592809413515,-0.515267028632716,0.271589890731252,0.276760984902999,0.368726040746068,0.277897180945695,-0.426129546657382,0.136724440675394,0.542389587091988,0.903810593042441,0.600540918528794,0.471639896518495,0.276919738683821,0.289498765736918,0.985343145624389,-0.155571922799256,-0.935879741021483,0.0748975477478504,0.140663472908644,0.200492298581185,0.303691250450401,0.292504816346401,0.150228387872813,-0.118777311791924,-0.373314532483556,-0.61433163643869,-0.441339390792476,-0.494862449201379,-0.108690481983028,-0.0562586177862747,-0.194237238686239,-0.288339503247891,-0.222741572690524,-0.382218489098716,-0.340044164777419,-0.254102217269578,-0.3892066687273,-0.408328522234128,-0.478132611769563,-0.504048020635398,-0.431698013559192,0.397636999473534,-0.539677277224237,-0.795580206722137,-0.4607685098943,0.112093032057806,0.171197313036842,-0.0034726234025845,0.946389166924662,-0.308272684169868,-0.792256105452177,-1.04516183163977,-0.934632690021047,-0.946463656728223,-0.969621440486863,-1.04516183163977,-1.04516183163977,-0.991340432885693,-0.99105910578971,-0.849061233423057,-0.625428581310168,-0.184343439397223,0.0367507576863355,0.305492903382156,-0.1052296012306,0.0900252910419789,0.251895735321492,0.226664807817374,0.204688522771287,0.230289601446669,0.152667239962167,0.247617965887989,0.179635666718236,0.13048188898373,0.170196652820645,0.219846329727937,0.190900298004019,0.155360086724567,0.149819204783924,0.159771702513815,0.323973316871283,0.208171839833048,0.2146836156001,0.270393957025394,0.254672853679536,0.209918555373918,0.201411564764141,0.182221005291102,0.231068697944516,0.155258309439694,0.211652605313968,0.168329937052558,0.248152011504863,0.181890535459749,0.337928644420159,0.319849044322587,0.397087486985845,0.381993651286527,0.443801384722742,0.3940991725775,0.287051786638548
|coexpression_dpi_cluster_scores_median=-0.105010408174497,0.425550074910633,0.43415890377832,0.209092788462037,0.474871489335624,-0.539137240498037,-0.391753240511172,-1.08259763585828,-0.704556997826568,-0.177939264045224,-1.33173235909985,-1.29840023373327,-1.2631010247187,-1.17424476165632,-1.2068664505049,-1.12560142381903,-1.33173235909985,-1.16347263937777,-1.33173235909985,-1.17810354923898,-0.235488398261038,-0.42080953309315,-0.841830339784734,-0.0471673878859928,0.0636853201709234,0.312385042036783,0.155725292660332,0.0938194136098218,0.516755865414134,0.314981827630889,0.139606826474121,-1.33173235909985,-1.33173235909985,-1.33173235909985,-0.872397613688128,-0.996546851971205,-0.878792784002,-1.33173235909985,-1.17917012294989,-1.33173235909985,-1.33173235909985,-1.33173235909985,-1.33173235909985,0.29325331650135,0.261765298148553,0.181085951124126,-0.390418635905871,0.172013227877357,0.0389932515015983,-0.0231552943560561,0.181543044923165,0.286633232822578,-1.33173235909985,-0.942437904911413,-1.1084473609193,1.1998333273089,0.88623472836639,0.87886801248344,-0.611685103394185,-0.498017988422005,-0.505367089056855,0.341130443082716,0.103691309853992,0.135829001368976,0.198289642150324,-0.10031596050676,0.0134937790987271,-0.220780299955502,-0.492234960498525,-0.553927254953598,-0.388137760730515,-0.421039955095684,-0.235338103156526,-0.486507203469546,-0.502381732533416,-0.364513547459791,-1.06961774662305,-1.05439564025421,-1.12371418014217,-0.820910387985261,-0.615025393483662,-0.66461636318846,-1.22479968031989,-1.00426609671773,-0.903471066780686,-0.440950558175751,-0.320832301144442,-0.640262885231548,1.08713733777922,0.601795452807749,-0.14979278135778,-0.777695096634092,-1.10643048792087,-1.33173235909985,-1.33173235909985,-1.33173235909985,-0.144110601521893,0.763653157420218,0.76035284652801,0.806384870971605,-0.50997412321799,0.451929865944589,-0.0568678923971331,-0.140510166809768,0.7801320597428,0.779100613510795,0.770404164682632,-0.0533590898151295,-0.809230620878718,-0.247758419035176,-0.10031596050676,0.115126167835216,0.193904166569898,0.0913582869635254,0.10051909515408,-0.111516214122342,0.9573070456015,-0.10031596050676,-0.211001458726831,0.475051620484604,0.111089438680908,0.132500241935208,0.905007442748202,-1.13154924145023,-1.06743722480085,0.397628089433722,0.377559122398504,-0.0580837241823573,0.286686063598864,-1.12783974633002,-1.33173235909985,-0.78604344884562,-1.02147548852976,-1.25783169541563,-1.12131641258858,-1.07376443528513,0.319545623657209,0.142716007316162,-0.587516878884262,0.250878738944017,-0.556935673729879,-0.0881936286983229,0.0684311881312343,0.243058292702803,0.179252923213405,0.0378526967263531,0.155743242238861,0.232946309709708,-0.127711891006747,0.0390001169855417,0.375583290675079,0.584936380295994,0.751983414647896,0.746557628774274,0.741991854691387,0.111396643082747,-0.0903763939999278,-0.0027316356866145,-0.0821513436838819,-0.253360162602021,-0.0167223632559441,0.0332625827460708,0.0808658846636092,0.0819858498855115,0.147984881868171,0.208815109201748,0.185787287867438,0.186168070332165,0.280924829652162,0.344589814151182,0.111572993873086,0.0576240840696254,0.251733028374502,0.156218629583342,-1.24884293260442,-0.528887521773363,0.746072684607351,0.506212918918328,-0.451804507244618,-0.331871413437561,-0.000726840672105891,0.0468553146657007,0.0467552719193285,0.217649069163629,0.269364418524339,0.156966539410983,0.10161353822771,0.0451641657799381,0.105201318642985,0.256544000703546,0.399560809474308,0.342216774004777,-0.0150501843643256,-0.0660855796329798,-0.10031596050676,0.0560115701250237,0.0420437717975275,0.112197210462888,0.0774779512690657,-0.18064587437644,-0.188706937465607,-0.246449533015638,-1.12954241431754,-0.879133389112377,-0.831750036511593,-1.1078248155947,-0.850490267018559,-0.741322368724586,-0.645024061322746,-0.502176270207603,-0.839285173265966,-0.622596337735695,-0.34828233336173,-0.295854194598644,-0.329605514379272,-0.754428144047858,-0.764592878923423,-0.871610752286026,0.350198907053475,0.0339627778581908,0.0504063970024455,0.145339751951623,0.324363260018905,0.466047636704349,0.516577354400098,0.5693926760124,0.534626861819124,0.574094938148499,0.485033631513712,0.389393262611707,0.320146130533892,0.32261712337728,0.503458891940787,0.208874279785427,-0.198543109825612,-0.12393340012907,-0.943461433818328,-1.10044883143743,0.58631653311286,0.254244723369724,-0.143089055701075,0.0274306731161118,-0.0155883679487822,-0.126121122153107,-0.0272270541245276,0.0420275753633728,0.23111302131679,0.239274122241214,0.0623559720737572,-1.11327641220504,-0.0722639059867669,0.215317229426311,0.152318788180322,-0.034001172994119,-0.319225843390723,0.0178306397918226,0.0144029358200682,0.0131267548179377,0.064340875515208,0.26746084442127,0.396304260096916,0.119517087205584,0.206222083440611,-0.10031596050676,-0.10031596050676,-0.10031596050676,-0.220624961937658,-0.370454376258847,-0.17213118833511,-0.0729284100846443,0.031520908386298,0.0185955334203929,0.106229732543495,0.134754838690772,-0.147544015001953,0.121857621804666,-0.389000529264641,0.45973984063469,0.740376707756413,0.671545359599178,0.88830398440057,0.994237628937709,0.24491514044586,-0.823188685814404,-0.670081641978375,0.46417049564823,0.238500612021529,-0.36380023458598,-0.624091779215748,-0.687243792329866,0.360666564757975,0.375087728915347,0.433685717790383,0.250696408929975,-0.568195097319149,0.128485212610305,0.529249369442515,0.824783869360068,0.560818486345557,0.417235397081397,0.306595891949961,0.240954291070717,0.925719610733137,-0.120461175734812,-1.33173235909985,0.0700416600845339,0.174856496306956,0.238435910643056,0.271795523426219,0.300736262270076,0.182635455236831,-0.0993027460106937,-0.477256018180363,-0.800024871232102,-0.540950127465366,-0.633607150733698,-0.10031596050676,-0.102165570732861,-0.266100069532174,-0.344717177432866,-0.294578645487079,-0.482664851862946,-0.456767276777885,-0.237005461644649,-0.406266014408265,-0.498690589217277,-0.573921011979541,-0.531578985287828,-0.572915943586068,0.401102787615451,-0.673551548674999,-1.11563157229536,-0.639851239628762,0.210092915411497,0.14124949553276,0.0261080621644636,1.08388483515987,-0.401110237909072,-1.00345396311673,-1.33173235909985,-1.00014493424369,-1.26285915534618,-1.33173235909985,-1.33173235909985,-1.33173235909985,-1.33173235909985,-1.33173235909985,-1.15052916692288,-0.87682443244044,-0.10031596050676,0.0740120788961169,0.382675397853688,-0.119497840854131,0.112954845918543,0.224220336522966,0.239535784636419,0.192550713528205,0.226738150991174,0.147578186615962,0.230105175873899,0.184316169976527,0.160018574992976,0.174143593799493,0.19029451810768,0.20450637902199,0.165322934178554,0.175013082350193,0.174578990789713,0.259983057172566,0.214573564868245,0.20156461770704,0.314458666137389,0.309004001562882,0.239056865485761,0.138159678708288,0.152345146170159,0.22338213743279,0.0931265229402483,0.209983892694265,0.146239601905289,0.361019966123412,0.148805123744266,0.428978827181321,0.344638998747279,0.459412224495691,0.471229246670717,0.609137781208405,0.515011052674425,0.43025272823565
|gostat_on_MCL_coexpression=
|gostat_on_MCL_coexpression=
}}
}}

Revision as of 13:30, 11 October 2012


Phase1 CAGE Peaks

 Short description
Mm9::chr6:135312964..135312979,+p2@Emp1
Mm9::chr6:135313022..135313040,+p1@Emp1
Mm9::chr6:135332522..135332543,+p@chr6:135332522..135332543
+


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

no results for this coexpression

Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:3547&oldid=2152833"