FFCP PHASE1:Mm9::chr2:152223881..152223933,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr2:152223881..152223933,- | |id=chr2:152223881..152223933,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.33e-07!102;UBERON:0000924!1.33e-07!102;UBERON:0006601!1.33e-07!102;UBERON:0002346!1.83e-07!71;UBERON:0003075!1.83e-07!71;UBERON:0007284!1.83e-07!71;UBERON:0000468!2.53e-07!333;UBERON:0003056!7.47e-07!49 | |ontology_enrichment_uberon=UBERON:0004121!1.33e-07!102;UBERON:0000924!1.33e-07!102;UBERON:0006601!1.33e-07!102;UBERON:0002346!1.83e-07!71;UBERON:0003075!1.83e-07!71;UBERON:0007284!1.83e-07!71;UBERON:0000468!2.53e-07!333;UBERON:0003056!7.47e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.38e-11,92;UBERON:0003056,9.96e-07,49 | |||
|phase1_expression=4.48416771893423,0,0,0,1.00179145989269,0.16787927191189,0,0.645616617207881,0,0,0.513653904676515,0.319088635981346,0.171200729931206,0.34968160967599,0.333109761815663,1.01237633694913,2.79824751251259,0.788655413395594,0.274228867211478,1.27316895539409,1.19060606211498,0.695036658406197,0.261199789138935,0,0,0,0,0,0.380046838912748,0,0,1.90509202037889,6.76571266343027,0,1.44425809875637,0.664938581433969,1.02084678131185,0,0,0,0,0,0,1.1330713617802,1.31790010585369,0.734187008646726,7.82391344348039,3.05235218932625,1.75748946187577,2.52758868796568,1.1198913730029,2.87505128729943,0.167782606057736,0.725362142011344,0,0.514518872071894,2.57880095944881,0,18.0061650165042,22.2176211294254,17.1134478946668,2.37191172448392,4.4464739805557,0,0,0,3.29560121570245,4.2264013585371,20.0120951755362,20.6559085647487,19.1395714829758,3.99911378165325,3.75476519617743,17.2712026893085,18.0189485514284,18.3843757322004,3.30347642998166,0.638436690425939,1.99688493233117,17.013331117195,13.5401712531566,13.022834263919,1.3959149950069,0.56276261003168,1.06958773443767,7.07108605136802,4.55589378557129,10.9975673036927,0.454357159999104,0.831287161174641,0.869593466105033,1.72084775396277,0,0,0.649776417447669,0.896053774194671,0.983110940922263,0,0,0,5.49289337129054,0,0,0,0.216491041011214,0.253359865475099,0,0.5709193985953,0,1.7813056687779,5.03107447621794,5.48037860961854,3.92046345335299,3.16517545160507,5.76184664964954,2.76466500925286,1.23597483867187,1.15679485535929,2.65383165584962,4.04417124868523,1.98757366614354,1.45462575940567,0,2.04946557908083,0.83778682725382,0.510914110417183,0.838705871541442,0.599902730993408,0.889491589511453,1.19832511523858,3.66000482254901,19.9790419859454,2.25971616249959,3.06858548796397,1.66230435647648,1.94689515681309,11.915205570487,1.8661045591514,0.252722758433675,1.05220927943237,5.59517904739626,8.27647575960503,8.46292010085141,6.17889753126432,8.300452896462,7.94305065766069,7.02762934197966,3.3631438196072,10.993967639575,10.2117283290622,8.44565395986955,7.67185063496512,5.28289773528636,3.48252166522167,3.08673204611915,7.76233640592123,0,1.02939162845886,0.284163499395593,7.87077935634907,6.0976775595085,4.68161359798639,11.1270025725049,8.26409773339096,5.707883176833,7.90615412151387,9.38956904898667,8.99093136227205,8.3925523455875,3.447516745661,6.80978000185188,4.67839959761063,4.61055242111206,4.83143107537338,1.89260953707715,21.4041593748912,0.660837565967596,0,4.47905326123991,6.0381534683714,4.38149368495117,3.22693639397348,2.2237804384487,2.28270751335071,0,1.64698954724011,1.50801125280162,3.18330355265841,2.14460495831032,0,0.648414149624083,0.398282546508734,8.53505554288868,4.91268604221834,4.50830942692322,4.88763186828754,4.65485969202302,8.6968416663995,3.03535378196435,1.62371162777562,1.41298855057237,1.35736880313981,0.592905254174298,2.16898637430922,1.76903095601883,1.12431056192427,0.405720242777006,2.17059443777175,0.763877555344259,0.863088412352432,1.94562272130042,0.823684239564244,1.43768206527355,0.744281895337007,0.624075346229121,1.26289438973556,0.358794827043824,1.4473305640901,0.923765950833023,4.35830247072115,5.0519142697028,4.2436271443797,3.28566347603903,4.69017520837084,5.47500374037832,5.46374214001837,3.62560831444239,4.65075848262427,5.26200736569707,1.14704320301017,1.38147985492716,1.73578870297814,0,0,0.983528546038072,1.65562047782839,1.12385412991454,1.17211686592203,2.95082901678016,1.51482556322624,1.26203287766503,1.56175497718655,4.30846795465598,4.77937595905104,4.67877215573028,4.24614796183249,2.02405350837447,4.09158201075837,5.92931666919785,3.85585579706168,4.40014264145633,9.79360820169904,15.4742611385897,3.46437258242324,1.32745138339963,4.61283208694465,2.41858845571801,1.88605079755898,3.54362271456927,3.07435147943927,3.10113951801865,2.18120237686503,2.85197902707777,0.948110273807448,3.16255825724996,1.03135543248187,0.340439605753788,5.94201610303324,7.1147276080515,5.78709994585299,5.67488747655275,5.88617098086833,4.77192159746151,13.3964577610424,0.469343416127421,0.63549621259146,0.882113592219848,0.8244312647074,5.9741837877485,2.89502039655148,2.38744688006273,1.80554989719567,1.7488850197791,1.29797711407357,1.36696704638282,5.77883230297023,5.00025223898222,1.69531611304222,1.50363650493128,1.37266903923914,1.86976272993241,2.09927178485487,2.07299960706636,0,7.75023184273782,5.28630614529807,2.26811215725783,3.97267762427491,1.9652630737156,2.42755823492677,3.55409859618945,1.30877970992015,1.03691978633434,0.621339313086926,0.56369293868419,8.37292657846281,6.12196414691261,7.00024278038572,8.65370817300798,5.06868376472335,11.3836521486381,7.16124116641726,5.87212328783981,2.17425708743405,0.288030006257865,1.58005560314089,5.47358081283443,2.05421914329655,1.68897069871134,1.07416017400489,0.596044064343795,1.08175904567972,0.443068581523732,1.21159739937777,1.143102099825,0.806609481094724,0.292373642219257,0.769694733122636,1.40252282617883,0.906921534460845,1.10992976687032,0.807424709485281,0.839423081820392,1.9318959403219,1.12609485270709,2.74727436400898,1.50057865355346,0.501572104035363,0.564751842617067,3.68260189205742,2.86447756719698,3.26521046453006,1.37016503954128,4.5323633843382,3.37511250115903,0.900642406448441,1.81256963593682,3.62432218226274,7.05753963572401,6.78342284781753,4.26834014385335,4.37592090722929,5.44994222832754,5.1476182366004,4.00044110042907,4.12070114477788,3.53011130550997,4.04315538822076,6.59046179714623,2.82939512079114,5.99305647807247,4.86591158277006,4.88201486122713,6.19181798667996,6.2577536010222,6.17309505483856,4.12085900803307,4.71036544430071,4.80016953339582,5.6792257970988,6.43777712857767,4.50573891560218,4.32903149910521,3.04612588410035,5.3049112133104,4.47218509444333,3.80251518768413,2.24456908663095,4.1522256343461,4.82671963640261,3.27384834535751,3.09873682371932,3.08650577569826,9.242991383704,3.27504251823572,5.58664740525576,6.31251495827183,2.8676884485537,3.01428186306548 | |phase1_expression=4.48416771893423,0,0,0,1.00179145989269,0.16787927191189,0,0.645616617207881,0,0,0.513653904676515,0.319088635981346,0.171200729931206,0.34968160967599,0.333109761815663,1.01237633694913,2.79824751251259,0.788655413395594,0.274228867211478,1.27316895539409,1.19060606211498,0.695036658406197,0.261199789138935,0,0,0,0,0,0.380046838912748,0,0,1.90509202037889,6.76571266343027,0,1.44425809875637,0.664938581433969,1.02084678131185,0,0,0,0,0,0,1.1330713617802,1.31790010585369,0.734187008646726,7.82391344348039,3.05235218932625,1.75748946187577,2.52758868796568,1.1198913730029,2.87505128729943,0.167782606057736,0.725362142011344,0,0.514518872071894,2.57880095944881,0,18.0061650165042,22.2176211294254,17.1134478946668,2.37191172448392,4.4464739805557,0,0,0,3.29560121570245,4.2264013585371,20.0120951755362,20.6559085647487,19.1395714829758,3.99911378165325,3.75476519617743,17.2712026893085,18.0189485514284,18.3843757322004,3.30347642998166,0.638436690425939,1.99688493233117,17.013331117195,13.5401712531566,13.022834263919,1.3959149950069,0.56276261003168,1.06958773443767,7.07108605136802,4.55589378557129,10.9975673036927,0.454357159999104,0.831287161174641,0.869593466105033,1.72084775396277,0,0,0.649776417447669,0.896053774194671,0.983110940922263,0,0,0,5.49289337129054,0,0,0,0.216491041011214,0.253359865475099,0,0.5709193985953,0,1.7813056687779,5.03107447621794,5.48037860961854,3.92046345335299,3.16517545160507,5.76184664964954,2.76466500925286,1.23597483867187,1.15679485535929,2.65383165584962,4.04417124868523,1.98757366614354,1.45462575940567,0,2.04946557908083,0.83778682725382,0.510914110417183,0.838705871541442,0.599902730993408,0.889491589511453,1.19832511523858,3.66000482254901,19.9790419859454,2.25971616249959,3.06858548796397,1.66230435647648,1.94689515681309,11.915205570487,1.8661045591514,0.252722758433675,1.05220927943237,5.59517904739626,8.27647575960503,8.46292010085141,6.17889753126432,8.300452896462,7.94305065766069,7.02762934197966,3.3631438196072,10.993967639575,10.2117283290622,8.44565395986955,7.67185063496512,5.28289773528636,3.48252166522167,3.08673204611915,7.76233640592123,0,1.02939162845886,0.284163499395593,7.87077935634907,6.0976775595085,4.68161359798639,11.1270025725049,8.26409773339096,5.707883176833,7.90615412151387,9.38956904898667,8.99093136227205,8.3925523455875,3.447516745661,6.80978000185188,4.67839959761063,4.61055242111206,4.83143107537338,1.89260953707715,21.4041593748912,0.660837565967596,0,4.47905326123991,6.0381534683714,4.38149368495117,3.22693639397348,2.2237804384487,2.28270751335071,0,1.64698954724011,1.50801125280162,3.18330355265841,2.14460495831032,0,0.648414149624083,0.398282546508734,8.53505554288868,4.91268604221834,4.50830942692322,4.88763186828754,4.65485969202302,8.6968416663995,3.03535378196435,1.62371162777562,1.41298855057237,1.35736880313981,0.592905254174298,2.16898637430922,1.76903095601883,1.12431056192427,0.405720242777006,2.17059443777175,0.763877555344259,0.863088412352432,1.94562272130042,0.823684239564244,1.43768206527355,0.744281895337007,0.624075346229121,1.26289438973556,0.358794827043824,1.4473305640901,0.923765950833023,4.35830247072115,5.0519142697028,4.2436271443797,3.28566347603903,4.69017520837084,5.47500374037832,5.46374214001837,3.62560831444239,4.65075848262427,5.26200736569707,1.14704320301017,1.38147985492716,1.73578870297814,0,0,0.983528546038072,1.65562047782839,1.12385412991454,1.17211686592203,2.95082901678016,1.51482556322624,1.26203287766503,1.56175497718655,4.30846795465598,4.77937595905104,4.67877215573028,4.24614796183249,2.02405350837447,4.09158201075837,5.92931666919785,3.85585579706168,4.40014264145633,9.79360820169904,15.4742611385897,3.46437258242324,1.32745138339963,4.61283208694465,2.41858845571801,1.88605079755898,3.54362271456927,3.07435147943927,3.10113951801865,2.18120237686503,2.85197902707777,0.948110273807448,3.16255825724996,1.03135543248187,0.340439605753788,5.94201610303324,7.1147276080515,5.78709994585299,5.67488747655275,5.88617098086833,4.77192159746151,13.3964577610424,0.469343416127421,0.63549621259146,0.882113592219848,0.8244312647074,5.9741837877485,2.89502039655148,2.38744688006273,1.80554989719567,1.7488850197791,1.29797711407357,1.36696704638282,5.77883230297023,5.00025223898222,1.69531611304222,1.50363650493128,1.37266903923914,1.86976272993241,2.09927178485487,2.07299960706636,0,7.75023184273782,5.28630614529807,2.26811215725783,3.97267762427491,1.9652630737156,2.42755823492677,3.55409859618945,1.30877970992015,1.03691978633434,0.621339313086926,0.56369293868419,8.37292657846281,6.12196414691261,7.00024278038572,8.65370817300798,5.06868376472335,11.3836521486381,7.16124116641726,5.87212328783981,2.17425708743405,0.288030006257865,1.58005560314089,5.47358081283443,2.05421914329655,1.68897069871134,1.07416017400489,0.596044064343795,1.08175904567972,0.443068581523732,1.21159739937777,1.143102099825,0.806609481094724,0.292373642219257,0.769694733122636,1.40252282617883,0.906921534460845,1.10992976687032,0.807424709485281,0.839423081820392,1.9318959403219,1.12609485270709,2.74727436400898,1.50057865355346,0.501572104035363,0.564751842617067,3.68260189205742,2.86447756719698,3.26521046453006,1.37016503954128,4.5323633843382,3.37511250115903,0.900642406448441,1.81256963593682,3.62432218226274,7.05753963572401,6.78342284781753,4.26834014385335,4.37592090722929,5.44994222832754,5.1476182366004,4.00044110042907,4.12070114477788,3.53011130550997,4.04315538822076,6.59046179714623,2.82939512079114,5.99305647807247,4.86591158277006,4.88201486122713,6.19181798667996,6.2577536010222,6.17309505483856,4.12085900803307,4.71036544430071,4.80016953339582,5.6792257970988,6.43777712857767,4.50573891560218,4.32903149910521,3.04612588410035,5.3049112133104,4.47218509444333,3.80251518768413,2.24456908663095,4.1522256343461,4.82671963640261,3.27384834535751,3.09873682371932,3.08650577569826,9.242991383704,3.27504251823572,5.58664740525576,6.31251495827183,2.8676884485537,3.01428186306548 | ||
|short_description=p3@Sox12 | |short_description=p3@Sox12 | ||
}} | }} |
Revision as of 11:17, 14 November 2012
Short description: | p3@Sox12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sox12_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | -99bp_to_ENSMUST00000063332, NM_011438, uc008nfi.1_5end |
EntrezGene: | Sox12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 6.38e-11 | 92 |
pre-chordal neural plate | 9.96e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.