FFCP PHASE1:Mm9::chr11:98190955..98190968,-: Difference between revisions
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|id=chr11:98190955..98190968,- | |id=chr11:98190955..98190968,- | ||
|ontology_enrichment_celltype=CL:0000117!4.16e-21!23;CL:0000337!4.16e-21!23;CL:0000540!3.31e-12!33;CL:0000047!3.31e-12!33;CL:0000031!3.31e-12!33;CL:0000404!3.31e-12!33;CL:0000393!3.67e-09!39;CL:0000211!3.67e-09!39;CL:0002609!5.64e-08!6;CL:0002319!1.20e-07!43;CL:0000221!2.58e-07!44;CL:0000133!2.58e-07!44 | |ontology_enrichment_celltype=CL:0000117!4.16e-21!23;CL:0000337!4.16e-21!23;CL:0000540!3.31e-12!33;CL:0000047!3.31e-12!33;CL:0000031!3.31e-12!33;CL:0000404!3.31e-12!33;CL:0000393!3.67e-09!39;CL:0000211!3.67e-09!39;CL:0002609!5.64e-08!6;CL:0002319!1.20e-07!43;CL:0000221!2.58e-07!44;CL:0000133!2.58e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.16e-28,23;CL:0000337,2.16e-28,23;CL:0000540,7.35e-18,33;CL:0000047,7.35e-18,33;CL:0000031,7.35e-18,33;CL:0000404,7.35e-18,33;CL:0000393,3.63e-14,39;CL:0000211,3.63e-14,39;CL:0002319,2.73e-12,43;CL:0000221,7.09e-12,44;CL:0000133,7.09e-12,44;CL:0002609,4.50e-11,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.02e-29!34;UBERON:0001049!1.74e-27!52;UBERON:0005068!1.74e-27!52;UBERON:0006241!1.74e-27!52;UBERON:0007135!1.74e-27!52;UBERON:0000955!8.00e-26!50;UBERON:0006238!8.00e-26!50;UBERON:0002791!2.65e-25!29;UBERON:0003528!2.65e-25!29;UBERON:0001893!2.65e-25!29;UBERON:0002616!6.09e-25!49;UBERON:0001017!6.16e-24!73;UBERON:0005743!6.16e-24!73;UBERON:0000033!4.12e-23!63;UBERON:0000073!7.63e-23!75;UBERON:0001016!7.63e-23!75;UBERON:0002346!3.07e-21!71;UBERON:0003075!3.07e-21!71;UBERON:0007284!3.07e-21!71;UBERON:0003080!1.90e-20!40;UBERON:0003056!2.75e-20!49;UBERON:0002780!4.84e-20!39;UBERON:0001890!4.84e-20!39;UBERON:0006240!4.84e-20!39;UBERON:0000956!5.05e-19!21;UBERON:0001869!5.05e-19!21;UBERON:0000203!5.05e-19!21;UBERON:0004121!2.38e-16!102;UBERON:0000924!2.38e-16!102;UBERON:0006601!2.38e-16!102;UBERON:0002619!1.48e-14!17;UBERON:0007811!6.18e-13!86;UBERON:0002021!4.10e-12!10;UBERON:0000411!4.10e-12!10;UBERON:0001950!4.10e-12!10;UBERON:0000153!1.18e-10!94;UBERON:0003076!1.68e-07!12;UBERON:0003057!1.68e-07!12;UBERON:0002420!2.27e-07!8;UBERON:0007245!2.27e-07!8;UBERON:0010009!2.27e-07!8;UBERON:0010011!2.27e-07!8;UBERON:0000454!2.27e-07!8 | |ontology_enrichment_uberon=UBERON:0002020!1.02e-29!34;UBERON:0001049!1.74e-27!52;UBERON:0005068!1.74e-27!52;UBERON:0006241!1.74e-27!52;UBERON:0007135!1.74e-27!52;UBERON:0000955!8.00e-26!50;UBERON:0006238!8.00e-26!50;UBERON:0002791!2.65e-25!29;UBERON:0003528!2.65e-25!29;UBERON:0001893!2.65e-25!29;UBERON:0002616!6.09e-25!49;UBERON:0001017!6.16e-24!73;UBERON:0005743!6.16e-24!73;UBERON:0000033!4.12e-23!63;UBERON:0000073!7.63e-23!75;UBERON:0001016!7.63e-23!75;UBERON:0002346!3.07e-21!71;UBERON:0003075!3.07e-21!71;UBERON:0007284!3.07e-21!71;UBERON:0003080!1.90e-20!40;UBERON:0003056!2.75e-20!49;UBERON:0002780!4.84e-20!39;UBERON:0001890!4.84e-20!39;UBERON:0006240!4.84e-20!39;UBERON:0000956!5.05e-19!21;UBERON:0001869!5.05e-19!21;UBERON:0000203!5.05e-19!21;UBERON:0004121!2.38e-16!102;UBERON:0000924!2.38e-16!102;UBERON:0006601!2.38e-16!102;UBERON:0002619!1.48e-14!17;UBERON:0007811!6.18e-13!86;UBERON:0002021!4.10e-12!10;UBERON:0000411!4.10e-12!10;UBERON:0001950!4.10e-12!10;UBERON:0000153!1.18e-10!94;UBERON:0003076!1.68e-07!12;UBERON:0003057!1.68e-07!12;UBERON:0002420!2.27e-07!8;UBERON:0007245!2.27e-07!8;UBERON:0010009!2.27e-07!8;UBERON:0010011!2.27e-07!8;UBERON:0000454!2.27e-07!8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,8.59e-42,34;UBERON:0000073,8.34e-39,54;UBERON:0003528,3.08e-35,29;UBERON:0002791,3.08e-35,29;UBERON:0001893,3.08e-35,29;UBERON:0001049,2.90e-34,52;UBERON:0005068,2.90e-34,52;UBERON:0006241,2.90e-34,52;UBERON:0007135,2.90e-34,52;UBERON:0001017,1.11e-32,73;UBERON:0001016,1.70e-31,75;UBERON:0000955,3.66e-30,47;UBERON:0006238,3.66e-30,47;UBERON:0002616,6.31e-29,46;UBERON:0000956,4.48e-28,21;UBERON:0001869,4.48e-28,21;UBERON:0000203,4.48e-28,21;UBERON:0002346,1.47e-27,64;UBERON:0003075,1.47e-27,64;UBERON:0007284,1.47e-27,64;UBERON:0002780,2.88e-26,39;UBERON:0001890,2.88e-26,39;UBERON:0006240,2.88e-26,39;UBERON:0003080,2.10e-25,40;UBERON:0004121,9.74e-24,95;UBERON:0000924,9.74e-24,95;UBERON:0006601,9.74e-24,95;UBERON:0010371,7.35e-23,73;UBERON:0002619,2.08e-21,17;UBERON:0003056,7.55e-21,49;UBERON:0002021,3.33e-17,10;UBERON:0000411,3.33e-17,10;UBERON:0001950,3.33e-17,10;UBERON:0010314,5.40e-16,92;UBERON:0000025,3.84e-10,114;UBERON:0003076,5.07e-09,12;UBERON:0003057,5.07e-09,12;UBERON:0004111,7.41e-09,122;UBERON:0002420,2.87e-08,8;UBERON:0007245,2.87e-08,8;UBERON:0010009,2.87e-08,8;UBERON:0010011,2.87e-08,8;UBERON:0000454,2.87e-08,8;UBERON:0001948,1.96e-07,5;UBERON:0002315,1.96e-07,5;UBERON:0000369,4.92e-07,5;UBERON:0002435,4.92e-07,5;UBERON:0000204,4.92e-07,5;UBERON:0010082,4.92e-07,5 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03474691289397,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0,17.2124756432073,29.5663004946403,22.2944459032465,1.99955689082663,1.32521124570968,12.2490799214954,10.1596199279331,14.7075005857603,1.10115880999389,3.70293280447044,1.68967186581868,1.58263545276233,1.18933936683133,2.6045668527838,2.79182999001381,0.56276261003168,3.81995619442025,2.06240009831567,2.98980529678116,5.77838282058432,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6885054296582,10.8912287542997,0,0,0,0,0.299581278809645,1.37250180845588,3.5183218591602,11.9938780932671,6.90431734791892,0.62336413367868,3.24482526135515,0,0,0,0.420883711772948,0,0,0,0,0.272145996605311,0.640568601424249,1.96773621575431,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.6598647021051,10.7020796874456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,1.64096361229084,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0,0,0,0,0,0.485561272309963,0,0.377210159511796,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5073071211291,13.3494318587081,16.6139698897425,17.1853182343688,12.3314853558716,12.0863023582352,16.8755625057951,13.5096360967266,14.9536994964788,13.4617681055473,0,0,1.02440163452481,0.243106717068294,1.25767897576789,0.735374033800057,0.222246727801615,1.44224540067226,1.28367683836726,0.758091635291392,0.25347929989024,0.754505365544305,0.749132059759059,0.960377286073039,1.09127391015665,0.476293691283074,1.62238056322798,1.15745532278223,0.824171801606613,0.588795680537589,1.37147700954166,0.354951612318675,1.90748951957857,1.16277133305863,1.03520318456864,1.01537529470012,0.914639864363863,0.526139422875686,0.679020569229309,2.24456908663095,0.355905054372522,0.788035859004508,0.818462086339379,0.929621047115796,0.385813221962283,3.2475375131933,0.701794825336225,0.644613162144895,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03474691289397,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0,17.2124756432073,29.5663004946403,22.2944459032465,1.99955689082663,1.32521124570968,12.2490799214954,10.1596199279331,14.7075005857603,1.10115880999389,3.70293280447044,1.68967186581868,1.58263545276233,1.18933936683133,2.6045668527838,2.79182999001381,0.56276261003168,3.81995619442025,2.06240009831567,2.98980529678116,5.77838282058432,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6885054296582,10.8912287542997,0,0,0,0,0.299581278809645,1.37250180845588,3.5183218591602,11.9938780932671,6.90431734791892,0.62336413367868,3.24482526135515,0,0,0,0.420883711772948,0,0,0,0,0.272145996605311,0.640568601424249,1.96773621575431,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.6598647021051,10.7020796874456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,1.64096361229084,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0,0,0,0,0,0.485561272309963,0,0.377210159511796,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5073071211291,13.3494318587081,16.6139698897425,17.1853182343688,12.3314853558716,12.0863023582352,16.8755625057951,13.5096360967266,14.9536994964788,13.4617681055473,0,0,1.02440163452481,0.243106717068294,1.25767897576789,0.735374033800057,0.222246727801615,1.44224540067226,1.28367683836726,0.758091635291392,0.25347929989024,0.754505365544305,0.749132059759059,0.960377286073039,1.09127391015665,0.476293691283074,1.62238056322798,1.15745532278223,0.824171801606613,0.588795680537589,1.37147700954166,0.354951612318675,1.90748951957857,1.16277133305863,1.03520318456864,1.01537529470012,0.914639864363863,0.526139422875686,0.679020569229309,2.24456908663095,0.355905054372522,0.788035859004508,0.818462086339379,0.929621047115796,0.385813221962283,3.2475375131933,0.701794825336225,0.644613162144895,0.191288332068843,0,0 | ||
|short_description=p2@Neurod2 | |short_description=p2@Neurod2 | ||
}} | }} |
Revision as of 03:53, 14 November 2012
Short description: | p2@Neurod2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Neurod2_5end |
Coexpression cluster: | MCL_coexpression_mm9:609 |
Association with transcript: | 0bp_to_ENSMUST00000041685, NM_010895, uc009vai.1_5end |
EntrezGene: | Neurod2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.16e-28 | 23 |
neuroblast (sensu Vertebrata) | 2.16e-28 | 23 |
neuron | 7.35e-18 | 33 |
neuronal stem cell | 7.35e-18 | 33 |
neuroblast | 7.35e-18 | 33 |
electrically signaling cell | 7.35e-18 | 33 |
electrically responsive cell | 3.63e-14 | 39 |
electrically active cell | 3.63e-14 | 39 |
neural cell | 2.73e-12 | 43 |
ectodermal cell | 7.09e-12 | 44 |
neurectodermal cell | 7.09e-12 | 44 |
neuron of cerebral cortex | 4.50e-11 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.