FFCP PHASE1:Mm9::chrX:71176074..71176089,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19703|HGNC=|MCL_coexpression_id=61|UniProt=G3XA46|association_with_transcript=0bp_to_ENSMUST00000146371,ENSMUST00000165359_5end|description=CAGE_peak_3_at_Renbp_5end|id=chrX:71176074..71176089,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.73e-07,3;UBERON:0000478,3.73e-07,3;UBERON:0000158,3.73e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.255129870453209,0.0992909512008853,0,0.319984845586813,0,0,0,0,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,1.1330713617802,1.11514624341466,1.65192076945513,0,0,0,0,0.419959264876088,0,0.167782606057736,0,0,0.771778308107841,0.573066879877513,0.515672092277442,0,0,0,0.677689064138264,1.77858959222228,1.3498495759221,0,0.7104801149461,0.599200221036809,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0.186399445825301,0.530083353332288,0.0755715601067855,1.15945795480671,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.34255163915718,0,0.29688427812965,0.173485326766136,0,0,0,0,0.125666591329675,6.42706916109372,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0.124406970610093,0.758168275301024,0,1.04096354370163,0.459804208866946,0.540186389416048,0.30140963567143,0.272145996605311,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.308534225774757,0.465067889500816,0.536546802799238,0.350296027101508,0,0,0,0.146199987425332,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0.38660238396628,6.25218926332362,13.787438718382,21.6857213768317,0,24.7048432086016,20.6094871216221,17.7071260116624,11.307917052909,0,0,0,0,0.114248512609729,0,0.814605311381257,1.16371492300575,0.701358198903186,1.70738650235495,2.36176236767363,2.19798218977925,2.46794327843601,0,0,0,0,0,0.241177159752417,0,0,0.324270453550071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714130922658041,0.585400943573396,0.157635144106191,0.221464689648775,0,0.327726629431476,0.345369963731791,0.144649058581512,3.01582567878545,1.63171705145613,0,0,0,0.117211686592203,0,0.252470927204373,0.315508219416257,1.56175497718655,0,0.477937595905104,0,0.283076530788832,0.809621403349789,0.584511715822624,0,0,0.141940085208269,0,0.325773918707152,0.329940245945071,0,0,0,0,0,0,3.87642439752332,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0,0,1.64270195644597,2.54198485036584,0,0,0.161464426695906,0.241251699712623,0.358117032009409,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,1.9652630737156,0,0,0,0,0,0,0,0.165458490457098,0.388902376688095,0.129159823477731,0,0,0,0,0,0,0,0.608175645870493,0,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0,0,0.221985953374065,0.179427713218951,1.00730769818447,0,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.551530525350042,0.666740183404846,1.44224540067226,1.28367683836726,1.51618327058278,1.52087579934144,0.565879024158229,0.842773567228942,1.08842759088278,1.26358031702349,0.952587382566147,0.463537303779422,1.15745532278223,0.824171801606613,1.47198920134397,0,0.532427418478012,0.953744759789284,1.30811774969096,1.59985946706062,1.18460451048347,1.09756783723664,1.31534855718921,0.814824683075171,1.12228454331548,1.66089025373844,0.886540341380071,0,1.23949472948773,0.964533054905707,0,1.63752125911786,1.93383948643468,0,0,0|short_description=p3@Renbp}} | ||
|EntrezGene=19703 | |||
|HGNC= | |||
|MCL_coexpression_id=61 | |||
|UniProt=G3XA46 | |||
|association_with_transcript=0bp_to_ENSMUST00000146371,ENSMUST00000165359_5end | |||
|description=CAGE_peak_3_at_Renbp_5end | |||
|id=chrX:71176074..71176089,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.73e-07,3;UBERON:0000478,3.73e-07,3;UBERON:0000158,3.73e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.255129870453209,0.0992909512008853,0,0.319984845586813,0,0,0,0,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,1.1330713617802,1.11514624341466,1.65192076945513,0,0,0,0,0.419959264876088,0,0.167782606057736,0,0,0.771778308107841,0.573066879877513,0.515672092277442,0,0,0,0.677689064138264,1.77858959222228,1.3498495759221,0,0.7104801149461,0.599200221036809,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0.186399445825301,0.530083353332288,0.0755715601067855,1.15945795480671,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.34255163915718,0,0.29688427812965,0.173485326766136,0,0,0,0,0.125666591329675,6.42706916109372,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0.124406970610093,0.758168275301024,0,1.04096354370163,0.459804208866946,0.540186389416048,0.30140963567143,0.272145996605311,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.308534225774757,0.465067889500816,0.536546802799238,0.350296027101508,0,0,0,0.146199987425332,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0.38660238396628,6.25218926332362,13.787438718382,21.6857213768317,0,24.7048432086016,20.6094871216221,17.7071260116624,11.307917052909,0,0,0,0,0.114248512609729,0,0.814605311381257,1.16371492300575,0.701358198903186,1.70738650235495,2.36176236767363,2.19798218977925,2.46794327843601,0,0,0,0,0,0.241177159752417,0,0,0.324270453550071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714130922658041,0.585400943573396,0.157635144106191,0.221464689648775,0,0.327726629431476,0.345369963731791,0.144649058581512,3.01582567878545,1.63171705145613,0,0,0,0.117211686592203,0,0.252470927204373,0.315508219416257,1.56175497718655,0,0.477937595905104,0,0.283076530788832,0.809621403349789,0.584511715822624,0,0,0.141940085208269,0,0.325773918707152,0.329940245945071,0,0,0,0,0,0,3.87642439752332,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0,0,1.64270195644597,2.54198485036584,0,0,0.161464426695906,0.241251699712623,0.358117032009409,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,1.9652630737156,0,0,0,0,0,0,0,0.165458490457098,0.388902376688095,0.129159823477731,0,0,0,0,0,0,0,0.608175645870493,0,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0,0,0.221985953374065,0.179427713218951,1.00730769818447,0,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.551530525350042,0.666740183404846,1.44224540067226,1.28367683836726,1.51618327058278,1.52087579934144,0.565879024158229,0.842773567228942,1.08842759088278,1.26358031702349,0.952587382566147,0.463537303779422,1.15745532278223,0.824171801606613,1.47198920134397,0,0.532427418478012,0.953744759789284,1.30811774969096,1.59985946706062,1.18460451048347,1.09756783723664,1.31534855718921,0.814824683075171,1.12228454331548,1.66089025373844,0.886540341380071,0,1.23949472948773,0.964533054905707,0,1.63752125911786,1.93383948643468,0,0,0 | |||
|short_description=p3@Renbp | |||
}} | |||
Revision as of 20:05, 14 September 2013
| Short description: | p3@Renbp |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Renbp_5end |
| Coexpression cluster: | MCL_coexpression_mm9:61 |
| Association with transcript: | 0bp_to_ENSMUST00000146371, ENSMUST00000165359_5end |
| EntrezGene: | Renbp |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| extraembryonic membrane | 3.73e-07 | 3 |
| extraembryonic structure | 3.73e-07 | 3 |
| membranous layer | 3.73e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
