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FFCP PHASE1:Mm9::chr15:91991595..91991652,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=12805|HGNC=|MCL_coexpression_id=1|UniProt=P12960|association_with_transcript=-135bp_to_ENSMUST00000068378,NM_001159647,uc007xil.2_5end|description=CAGE_peak_4_at_Cntn1_5end|id=chr15:91991595..91991652,+|ontology_enrichment_celltype=CL:0000117!1.68e-11!23;CL:0000337!1.68e-11!23;CL:0000540!7.80e-09!33;CL:0000047!7.80e-09!33;CL:0000031!7.80e-09!33;CL:0000404!7.80e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.39e-07,23;CL:0000337,4.39e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.36e-23!52;UBERON:0005068!9.36e-23!52;UBERON:0006241!9.36e-23!52;UBERON:0007135!9.36e-23!52;UBERON:0001017!3.27e-22!73;UBERON:0005743!3.27e-22!73;UBERON:0002346!2.32e-21!71;UBERON:0003075!2.32e-21!71;UBERON:0007284!2.32e-21!71;UBERON:0000073!4.61e-21!75;UBERON:0001016!4.61e-21!75;UBERON:0000955!6.18e-21!50;UBERON:0006238!6.18e-21!50;UBERON:0002616!3.41e-20!49;UBERON:0000033!1.70e-19!63;UBERON:0002020!2.45e-18!34;UBERON:0004121!2.72e-18!102;UBERON:0000924!2.72e-18!102;UBERON:0006601!2.72e-18!102;UBERON:0003080!4.50e-16!40;UBERON:0003056!2.49e-15!49;UBERON:0002780!2.85e-15!39;UBERON:0001890!2.85e-15!39;UBERON:0006240!2.85e-15!39;UBERON:0002791!2.34e-14!29;UBERON:0003528!2.34e-14!29;UBERON:0001893!2.34e-14!29;UBERON:0002021!8.78e-10!10;UBERON:0000411!8.78e-10!10;UBERON:0001950!8.78e-10!10;UBERON:0007811!8.98e-10!86;UBERON:0000956!2.19e-09!21;UBERON:0001869!2.19e-09!21;UBERON:0000203!2.19e-09!21;UBERON:0002619!1.23e-08!17;UBERON:0000153!4.26e-08!94;UBERON:0003076!2.08e-07!12;UBERON:0003057!2.08e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.95e-24,54;UBERON:0001049,2.83e-22,52;UBERON:0005068,2.83e-22,52;UBERON:0006241,2.83e-22,52;UBERON:0007135,2.83e-22,52;UBERON:0001017,1.58e-20,73;UBERON:0001016,1.10e-19,75;UBERON:0002020,1.93e-19,34;UBERON:0002346,2.20e-17,64;UBERON:0003075,2.20e-17,64;UBERON:0007284,2.20e-17,64;UBERON:0000955,1.36e-16,47;UBERON:0006238,1.36e-16,47;UBERON:0002616,1.23e-15,46;UBERON:0002021,7.90e-15,10;UBERON:0000411,7.90e-15,10;UBERON:0001950,7.90e-15,10;UBERON:0004121,4.43e-14,95;UBERON:0000924,4.43e-14,95;UBERON:0006601,4.43e-14,95;UBERON:0010371,4.72e-14,73;UBERON:0003528,9.29e-14,29;UBERON:0002791,9.29e-14,29;UBERON:0001893,9.29e-14,29;UBERON:0003080,1.53e-12,40;UBERON:0003076,9.79e-12,12;UBERON:0003057,9.79e-12,12;UBERON:0002780,1.51e-11,39;UBERON:0001890,1.51e-11,39;UBERON:0006240,1.51e-11,39;UBERON:0002619,2.03e-11,17;UBERON:0000956,2.36e-10,21;UBERON:0001869,2.36e-10,21;UBERON:0000203,2.36e-10,21;UBERON:0003056,5.37e-10,49;UBERON:0002240,2.24e-09,6;UBERON:0005174,2.24e-09,6;UBERON:0001137,2.24e-09,6;UBERON:0010314,2.99e-09,92;UBERON:0001948,7.43e-08,5;UBERON:0002315,7.43e-08,5;UBERON:0002950,8.20e-07,4;UBERON:0001891,8.20e-07,4;UBERON:0009616,8.20e-07,4;UBERON:0010286,8.20e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82694805679814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0,0.414758449233911,0,0.841299845405528,8.56952953211411,6.40518768759679,0.244981598429908,0.287536413054709,0,9.91042928994498,16.5993539510744,15.8214729253931,0.527545150920775,0.914876436024097,0.52091337055676,10.3297709630511,14.069065250792,20.6277634498694,25.3380583507354,20.786265396669,4.47358669980721,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0.230615497256059,0.60289056221049,0.352766121407114,0.251333182659351,0,0,0,0.161766849947409,0,0,0,6.14839673724249,4.1889341362691,0.255457055208591,0,0,0,17.8250860891739,16.4700217014706,7.413606774659,20.3374454624963,19.9458056717658,17.6619837875626,19.4689515681309,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0.0937017245597288,1.03481348295606,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.7827770895959,12.0398396483763,0,0,0,0,0,0.201683524623343,0.444756087689741,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.8991061978026,26.9586879162067,0,0,0,0,0.430846795465598,0.238968797952552,0.222798674082394,0,0,0,1.18586333383957,6.42642632843614,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0.356737635204141,0.987294123612726,0.608929898229199,0,0,0.441056796109924,0,0,0,0,0,0,26.1449675834819,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0,0,0.134864346384821,0.330613822901344,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.772758376128762,0,0,0,0,19.2015626489803,22.5559365888517,24.0616115644547,18.7319968754619,13.0165678756422,9.82012066606611,19.5756525067224,12.6089936902782,15.406841905463,12.9440077937955,0,0,0,0.486213434136588,0.209613162627982,1.10306105070008,0.222246727801615,2.47242068686673,1.92551525755089,2.02157769411038,3.04175159868288,2.45214243801899,2.1537546718073,1.72867911493147,1.43588672389033,0.952587382566147,1.85414921511769,1.35036454324594,3.29668720642645,1.47198920134397,1.02860775715625,1.24233064311536,0.715308569841963,1.59881058295561,1.59985946706062,1.35383372626682,1.46342378298218,2.63069711437843,1.22223702461276,1.12228454331548,1.42362021749009,0.985044823755635,0.409231043169689,0.464810523557898,1.15743966588685,1.99848462350357,2.10538447600868,0.859484216193193,0.57386499620653,0.441182838239031,1.15933917810211|short_description=p4@Cntn1}}
|EntrezGene=12805
|HGNC=
|MCL_coexpression_id=1
|UniProt=P12960
|association_with_transcript=-135bp_to_ENSMUST00000068378,NM_001159647,uc007xil.2_5end
|description=CAGE_peak_4_at_Cntn1_5end
|id=chr15:91991595..91991652,+
|ontology_enrichment_celltype=CL:0000117!1.68e-11!23;CL:0000337!1.68e-11!23;CL:0000540!7.80e-09!33;CL:0000047!7.80e-09!33;CL:0000031!7.80e-09!33;CL:0000404!7.80e-09!33
|ontology_enrichment_celltype_v019_2=CL:0000117,4.39e-07,23;CL:0000337,4.39e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!9.36e-23!52;UBERON:0005068!9.36e-23!52;UBERON:0006241!9.36e-23!52;UBERON:0007135!9.36e-23!52;UBERON:0001017!3.27e-22!73;UBERON:0005743!3.27e-22!73;UBERON:0002346!2.32e-21!71;UBERON:0003075!2.32e-21!71;UBERON:0007284!2.32e-21!71;UBERON:0000073!4.61e-21!75;UBERON:0001016!4.61e-21!75;UBERON:0000955!6.18e-21!50;UBERON:0006238!6.18e-21!50;UBERON:0002616!3.41e-20!49;UBERON:0000033!1.70e-19!63;UBERON:0002020!2.45e-18!34;UBERON:0004121!2.72e-18!102;UBERON:0000924!2.72e-18!102;UBERON:0006601!2.72e-18!102;UBERON:0003080!4.50e-16!40;UBERON:0003056!2.49e-15!49;UBERON:0002780!2.85e-15!39;UBERON:0001890!2.85e-15!39;UBERON:0006240!2.85e-15!39;UBERON:0002791!2.34e-14!29;UBERON:0003528!2.34e-14!29;UBERON:0001893!2.34e-14!29;UBERON:0002021!8.78e-10!10;UBERON:0000411!8.78e-10!10;UBERON:0001950!8.78e-10!10;UBERON:0007811!8.98e-10!86;UBERON:0000956!2.19e-09!21;UBERON:0001869!2.19e-09!21;UBERON:0000203!2.19e-09!21;UBERON:0002619!1.23e-08!17;UBERON:0000153!4.26e-08!94;UBERON:0003076!2.08e-07!12;UBERON:0003057!2.08e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.95e-24,54;UBERON:0001049,2.83e-22,52;UBERON:0005068,2.83e-22,52;UBERON:0006241,2.83e-22,52;UBERON:0007135,2.83e-22,52;UBERON:0001017,1.58e-20,73;UBERON:0001016,1.10e-19,75;UBERON:0002020,1.93e-19,34;UBERON:0002346,2.20e-17,64;UBERON:0003075,2.20e-17,64;UBERON:0007284,2.20e-17,64;UBERON:0000955,1.36e-16,47;UBERON:0006238,1.36e-16,47;UBERON:0002616,1.23e-15,46;UBERON:0002021,7.90e-15,10;UBERON:0000411,7.90e-15,10;UBERON:0001950,7.90e-15,10;UBERON:0004121,4.43e-14,95;UBERON:0000924,4.43e-14,95;UBERON:0006601,4.43e-14,95;UBERON:0010371,4.72e-14,73;UBERON:0003528,9.29e-14,29;UBERON:0002791,9.29e-14,29;UBERON:0001893,9.29e-14,29;UBERON:0003080,1.53e-12,40;UBERON:0003076,9.79e-12,12;UBERON:0003057,9.79e-12,12;UBERON:0002780,1.51e-11,39;UBERON:0001890,1.51e-11,39;UBERON:0006240,1.51e-11,39;UBERON:0002619,2.03e-11,17;UBERON:0000956,2.36e-10,21;UBERON:0001869,2.36e-10,21;UBERON:0000203,2.36e-10,21;UBERON:0003056,5.37e-10,49;UBERON:0002240,2.24e-09,6;UBERON:0005174,2.24e-09,6;UBERON:0001137,2.24e-09,6;UBERON:0010314,2.99e-09,92;UBERON:0001948,7.43e-08,5;UBERON:0002315,7.43e-08,5;UBERON:0002950,8.20e-07,4;UBERON:0001891,8.20e-07,4;UBERON:0009616,8.20e-07,4;UBERON:0010286,8.20e-07,4
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82694805679814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0,0.414758449233911,0,0.841299845405528,8.56952953211411,6.40518768759679,0.244981598429908,0.287536413054709,0,9.91042928994498,16.5993539510744,15.8214729253931,0.527545150920775,0.914876436024097,0.52091337055676,10.3297709630511,14.069065250792,20.6277634498694,25.3380583507354,20.786265396669,4.47358669980721,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0.230615497256059,0.60289056221049,0.352766121407114,0.251333182659351,0,0,0,0.161766849947409,0,0,0,6.14839673724249,4.1889341362691,0.255457055208591,0,0,0,17.8250860891739,16.4700217014706,7.413606774659,20.3374454624963,19.9458056717658,17.6619837875626,19.4689515681309,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0.0937017245597288,1.03481348295606,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.7827770895959,12.0398396483763,0,0,0,0,0,0.201683524623343,0.444756087689741,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.8991061978026,26.9586879162067,0,0,0,0,0.430846795465598,0.238968797952552,0.222798674082394,0,0,0,1.18586333383957,6.42642632843614,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0.356737635204141,0.987294123612726,0.608929898229199,0,0,0.441056796109924,0,0,0,0,0,0,26.1449675834819,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0,0,0.134864346384821,0.330613822901344,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.772758376128762,0,0,0,0,19.2015626489803,22.5559365888517,24.0616115644547,18.7319968754619,13.0165678756422,9.82012066606611,19.5756525067224,12.6089936902782,15.406841905463,12.9440077937955,0,0,0,0.486213434136588,0.209613162627982,1.10306105070008,0.222246727801615,2.47242068686673,1.92551525755089,2.02157769411038,3.04175159868288,2.45214243801899,2.1537546718073,1.72867911493147,1.43588672389033,0.952587382566147,1.85414921511769,1.35036454324594,3.29668720642645,1.47198920134397,1.02860775715625,1.24233064311536,0.715308569841963,1.59881058295561,1.59985946706062,1.35383372626682,1.46342378298218,2.63069711437843,1.22223702461276,1.12228454331548,1.42362021749009,0.985044823755635,0.409231043169689,0.464810523557898,1.15743966588685,1.99848462350357,2.10538447600868,0.859484216193193,0.57386499620653,0.441182838239031,1.15933917810211
|short_description=p4@Cntn1
}}

Revision as of 11:37, 13 September 2013

Short description:p4@Cntn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Cntn1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -135bp_to_ENSMUST00000068378, NM_001159647, uc007xil.2_5end
EntrezGene:Cntn1
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Cntn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.63
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D625.34
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.79
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A417.83
corpus striatum, adult.CNhs10487.19-21D816.47
corpus striatum, neonate N00.CNhs11226.630-43F17.41
cortex, adult.CNhs10473.12-14D520.34
cortex, neonate N30.CNhs11107.1392-42F219.95
diencephalon, adult.CNhs10482.20-12F217.66
diencephalon, neonate N30.CNhs11201.1388-42B219.47
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E852.78
hippocampus, neonate N00.CNhs11228.627-43G112.04
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C228.90
medulla oblongata, neonate N30.CNhs11200.1396-42A326.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C926.14
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.20
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.56
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A324.06
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A619.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.39e-0723
neuroblast (sensu Vertebrata)4.39e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.95e-2454
neural tube2.83e-2252
neural rod2.83e-2252
future spinal cord2.83e-2252
neural keel2.83e-2252
central nervous system1.58e-2073
nervous system1.10e-1975
gray matter1.93e-1934
neurectoderm2.20e-1764
neural plate2.20e-1764
presumptive neural plate2.20e-1764
brain1.36e-1647
future brain1.36e-1647
regional part of brain1.23e-1546
occipital lobe7.90e-1510
visual cortex7.90e-1510
neocortex7.90e-1510
ectoderm-derived structure4.43e-1495
ectoderm4.43e-1495
presumptive ectoderm4.43e-1495
ecto-epithelium4.72e-1473
brain grey matter9.29e-1429
regional part of telencephalon9.29e-1429
telencephalon9.29e-1429
anterior neural tube1.53e-1240
posterior neural tube9.79e-1212
chordal neural plate9.79e-1212
regional part of forebrain1.51e-1139
forebrain1.51e-1139
future forebrain1.51e-1139
regional part of cerebral cortex2.03e-1117
cerebral cortex2.36e-1021
cerebral hemisphere2.36e-1021
pallium2.36e-1021
pre-chordal neural plate5.37e-1049
spinal cord2.24e-096
dorsal region element2.24e-096
dorsum2.24e-096
structure with developmental contribution from neural crest2.99e-0992
regional part of spinal cord7.43e-085
gray matter of spinal cord7.43e-085
regional part of midbrain8.20e-074
midbrain8.20e-074
presumptive midbrain8.20e-074
midbrain neural tube8.20e-074







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