FFCP PHASE1:Mm9::chr2:104689913..104689957,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=228413|HGNC=|MCL_coexpression_id=3297|UniProt=Q4KL73,Q8BGN6|association_with_transcript=49bp_to_NM_178695,uc008lki.2_5end|description=CAGE_peak_1_at_Prrg4_5end|id=chr2:104689913..104689957,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001264!6.38e-07!12;UBERON:0003922!6.38e-07!12;UBERON:0002114!6.38e-07!12;UBERON:0003923!6.38e-07!12;UBERON:0003924!6.38e-07!12;UBERON:0003921!6.38e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001264,1.17e-07,12|phase1_expression=2.08193501236232,2.09385244583617,1.36499771816861,0,1.00179145989269,0.671517087647559,0.467225281191051,0.258246646883153,4.36445038670167,0.468129052643987,1.36974374580404,0,1.02720437958723,0,1.33243904726265,0.202475267389826,0,0.788655413395594,3.01651753932625,2.54633791078818,0.765389611359628,1.88652807281682,4.17919662622297,0.47997726838022,0.45881856213434,0.57423196411502,0.430761996159075,1.07735616342945,0.570070258369122,0.252030129759931,0.665191531965914,0,0,0,0.866554859253824,2.32728503501889,1.83752420636132,0,0,0.523523743973798,0,0.683045484958446,0,0.251793635951155,0.202753862439029,0,0,0.65407546914134,1.31811709640683,0.972149495371417,0.839918529752175,2.87505128729943,3.02008690903925,0,6.04968838456435,2.82985379639542,0.85960031981627,3.09403255366465,0,0,0,5.08266798103698,2.66788438833342,0.449949858640699,0,0.7104801149461,0.299600110518405,1.15265491596466,0.103689612308478,0.270011876663381,0,0.856952953211411,0,0,0,0.919218786610021,0,0,0.153606533256243,0,0,0,0,1.12552522006336,0,0.883885756421003,0.284743361598206,0,3.10477392666055,2.72057616384428,3.47837386442013,0,14.2793980078628,0,0,1.34408066129201,0.140444420131752,0,0,0,2.95771181531029,0,0,0,19.9171757730317,23.3091076237091,20.2209778005913,1.02765491747154,4.40194402200192,3.26572705942614,0,0.608930956624282,2.30615497256059,1.95939432718409,1.52865319276416,1.75933227861546,5.93267922562497,1.15679485535929,0,0.161766849947409,0.441683036920787,0,0,0,0,1.02182822083437,4.79260498023681,1.79970819298022,3.17675567682662,0.149790639404823,0,0.251308704225729,0.173824320192276,0,0.41557608911912,0,1.52759045775474,0.746441823660558,3.0326731012041,1.05220927943237,0,0.229902104433473,0.720248519221397,0.753524089178575,1.56483948048054,0.768682321709099,1.03071897015702,0.258703370739016,0,0.378212160335639,0.527853372491847,1.53437012699302,1.39023624612799,3.48252166522167,1.4404749548556,0.796137067273973,0,1.02939162845886,1.42081749697796,0.414251545071004,0,0.180062061461015,1.89395788468168,0.196764231747404,0.771335564436891,0.465067889500816,1.07309360559848,0.817357396570186,0.493679549740441,1.31333971263276,1.37816976227955,0.146199987425332,1.53685080703735,1.20785776884335,0.420579897128254,0.617427674275707,0.330418782983798,1.32225283331772,0.426576501070468,0.232236671860439,1.80414445850931,1.4117846723634,1.11189021922435,1.71203063501303,0.474529061544512,0.823494773620054,0.754005626400808,0.397912944082302,0.58489226135736,0.898819408654221,0.432276099749388,0.597423819763102,0.758671603812327,0.799739588268102,4.50830942692322,2.24016460629846,1.55161989734101,1.1221731182451,2.46622494784603,1.91893192373483,1.09899109488962,1.85095745882701,0.296452627087149,0.333690211432188,0.196558995113203,0.674586337154561,0.405720242777006,0.482354319504834,1.01850340712568,2.5892652370573,1.62135226775035,1.09824565275233,0,0,2.49630138491648,1.01031551178845,0.717589654087649,0.482443521363367,1.10851914099963,0.757965647081939,1.46668478797823,2.03694102930226,0.704070744865506,1.50755631697634,1.19021820443007,1.17080188714679,0.788175720530955,0.8858587585951,0.637819074629948,1.14704320301017,0.345369963731791,0.723245292907558,0,1.63171705145613,4.91764273019036,3.31124095565679,0.642202359951168,0.35163505977661,0.491804836130026,0,3.15508219416257,3.90438744296638,1.29254038639679,1.91175038362042,3.11918143715352,1.13230612315533,4.04810701674894,4.38383786866968,5.92931666919785,0.321321316421807,0.567760340833074,1.6025904330053,1.79175655288934,2.47455184458803,1.32745138339963,2.6705869977048,2.72091201268276,7.92141334974772,4.72483028609236,7.99331384654211,4.65170927702798,6.5436071305951,5.70395805415554,8.21695570633122,6.32511651449993,8.25084345985495,0.680879211507576,1.8006109403131,0.517434735131018,1.07168517515796,0.886701168211368,0.356737635204141,0.987294123612726,1.522324745573,15.4883327322049,23.513359865884,0.441056796109924,7.25499512942512,4.84393280087717,4.70440814439616,5.37175548014114,8.20704498725306,0.582961673259701,0.370850604021019,0.854354403989263,1.03193433981611,0.370389054739423,0.376736914009382,0.546776910884101,0,8.66889992968662,10.9162132812453,11.6087977995716,1.90934123603023,0.790839983952838,2.64315307264903,3.02414954301044,3.13632444021703,2.40198820120795,3.10187996685088,2.89287095038676,1.83229159388821,1.8146096260851,1.242678626173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| ||
|EntrezGene=228413 | |||
|HGNC= | |||
|MCL_coexpression_id=3297 | |||
|UniProt=Q4KL73,Q8BGN6 | |||
|association_with_transcript=49bp_to_NM_178695,uc008lki.2_5end | |||
|description=CAGE_peak_1_at_Prrg4_5end | |||
|id=chr2:104689913..104689957,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001264!6.38e-07!12;UBERON:0003922!6.38e-07!12;UBERON:0002114!6.38e-07!12;UBERON:0003923!6.38e-07!12;UBERON:0003924!6.38e-07!12;UBERON:0003921!6.38e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,1.17e-07,12 | |||
|phase1_expression=2.08193501236232,2.09385244583617,1.36499771816861,0,1.00179145989269,0.671517087647559,0.467225281191051,0.258246646883153,4.36445038670167,0.468129052643987,1.36974374580404,0,1.02720437958723,0,1.33243904726265,0.202475267389826,0,0.788655413395594,3.01651753932625,2.54633791078818,0.765389611359628,1.88652807281682,4.17919662622297,0.47997726838022,0.45881856213434,0.57423196411502,0.430761996159075,1.07735616342945,0.570070258369122,0.252030129759931,0.665191531965914,0,0,0,0.866554859253824,2.32728503501889,1.83752420636132,0,0,0.523523743973798,0,0.683045484958446,0,0.251793635951155,0.202753862439029,0,0,0.65407546914134,1.31811709640683,0.972149495371417,0.839918529752175,2.87505128729943,3.02008690903925,0,6.04968838456435,2.82985379639542,0.85960031981627,3.09403255366465,0,0,0,5.08266798103698,2.66788438833342,0.449949858640699,0,0.7104801149461,0.299600110518405,1.15265491596466,0.103689612308478,0.270011876663381,0,0.856952953211411,0,0,0,0.919218786610021,0,0,0.153606533256243,0,0,0,0,1.12552522006336,0,0.883885756421003,0.284743361598206,0,3.10477392666055,2.72057616384428,3.47837386442013,0,14.2793980078628,0,0,1.34408066129201,0.140444420131752,0,0,0,2.95771181531029,0,0,0,19.9171757730317,23.3091076237091,20.2209778005913,1.02765491747154,4.40194402200192,3.26572705942614,0,0.608930956624282,2.30615497256059,1.95939432718409,1.52865319276416,1.75933227861546,5.93267922562497,1.15679485535929,0,0.161766849947409,0.441683036920787,0,0,0,0,1.02182822083437,4.79260498023681,1.79970819298022,3.17675567682662,0.149790639404823,0,0.251308704225729,0.173824320192276,0,0.41557608911912,0,1.52759045775474,0.746441823660558,3.0326731012041,1.05220927943237,0,0.229902104433473,0.720248519221397,0.753524089178575,1.56483948048054,0.768682321709099,1.03071897015702,0.258703370739016,0,0.378212160335639,0.527853372491847,1.53437012699302,1.39023624612799,3.48252166522167,1.4404749548556,0.796137067273973,0,1.02939162845886,1.42081749697796,0.414251545071004,0,0.180062061461015,1.89395788468168,0.196764231747404,0.771335564436891,0.465067889500816,1.07309360559848,0.817357396570186,0.493679549740441,1.31333971263276,1.37816976227955,0.146199987425332,1.53685080703735,1.20785776884335,0.420579897128254,0.617427674275707,0.330418782983798,1.32225283331772,0.426576501070468,0.232236671860439,1.80414445850931,1.4117846723634,1.11189021922435,1.71203063501303,0.474529061544512,0.823494773620054,0.754005626400808,0.397912944082302,0.58489226135736,0.898819408654221,0.432276099749388,0.597423819763102,0.758671603812327,0.799739588268102,4.50830942692322,2.24016460629846,1.55161989734101,1.1221731182451,2.46622494784603,1.91893192373483,1.09899109488962,1.85095745882701,0.296452627087149,0.333690211432188,0.196558995113203,0.674586337154561,0.405720242777006,0.482354319504834,1.01850340712568,2.5892652370573,1.62135226775035,1.09824565275233,0,0,2.49630138491648,1.01031551178845,0.717589654087649,0.482443521363367,1.10851914099963,0.757965647081939,1.46668478797823,2.03694102930226,0.704070744865506,1.50755631697634,1.19021820443007,1.17080188714679,0.788175720530955,0.8858587585951,0.637819074629948,1.14704320301017,0.345369963731791,0.723245292907558,0,1.63171705145613,4.91764273019036,3.31124095565679,0.642202359951168,0.35163505977661,0.491804836130026,0,3.15508219416257,3.90438744296638,1.29254038639679,1.91175038362042,3.11918143715352,1.13230612315533,4.04810701674894,4.38383786866968,5.92931666919785,0.321321316421807,0.567760340833074,1.6025904330053,1.79175655288934,2.47455184458803,1.32745138339963,2.6705869977048,2.72091201268276,7.92141334974772,4.72483028609236,7.99331384654211,4.65170927702798,6.5436071305951,5.70395805415554,8.21695570633122,6.32511651449993,8.25084345985495,0.680879211507576,1.8006109403131,0.517434735131018,1.07168517515796,0.886701168211368,0.356737635204141,0.987294123612726,1.522324745573,15.4883327322049,23.513359865884,0.441056796109924,7.25499512942512,4.84393280087717,4.70440814439616,5.37175548014114,8.20704498725306,0.582961673259701,0.370850604021019,0.854354403989263,1.03193433981611,0.370389054739423,0.376736914009382,0.546776910884101,0,8.66889992968662,10.9162132812453,11.6087977995716,1.90934123603023,0.790839983952838,2.64315307264903,3.02414954301044,3.13632444021703,2.40198820120795,3.10187996685088,2.89287095038676,1.83229159388821,1.8146096260851,1.24267862617385,0,0,0.66183396182839,0.388902376688095,0.516639293910924,0.675824501963113,0.117357238645754,1.0416350787516,1.8874681996628,0.724752362478018,0.288030006257865,2.52808896502543,3.24360344464263,4.00572732942826,4.02754551231165,1.9692936523423,1.39076948346885,1.44234539423963,2.21534290761866,1.21159739937777,2.057583779685,1.20991422164209,1.75424185331554,1.25075394132428,3.62318396762864,3.62768613784338,13.5411431558179,23.0564611486353,28.3725001655293,6.37525660306228,5.63047426353546,4.02933573387983,9.86094543763703,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0.207574695168353,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| |||
|short_description=p1@Prrg4 | |||
}} | |||
Revision as of 21:31, 13 September 2013
| Short description: | p1@Prrg4 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Prrg4_5end |
| Coexpression cluster: | MCL_coexpression_mm9:3297 |
| Association with transcript: | 49bp_to_NM_178695, uc008lki.2_5end |
| EntrezGene: | Prrg4 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| pancreas | 1.17e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
