FFCP PHASE1:Mm9::chr1:166388856..166388868,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=11931|HGNC=|UniProt=P14094,Q545P0|association_with_transcript=-370bp_to_ENSMUST00000027863,NM_009721,uc007dip.1_5end|description=CAGE_peak_5_at_Atp1b1_5end|id=chr1:166388856..166388868,-|ontology_enrichment_celltype=CL:0002563!7.57e-10!9;CL:0002251!7.57e-10!9;CL:0000075!1.73e-07!7|ontology_enrichment_celltype_v019_2=CL:0002563,4.75e-09,9;CL:0002251,4.75e-09,9;CL:0000239,4.32e-08,6;CL:0000677,4.32e-08,6;CL:0000584,4.32e-08,6;CL:0000075,5.34e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.88e-16!15;UBERON:0001242!9.15e-15!13;UBERON:0000060!9.15e-15!13;UBERON:0001262!9.15e-15!13;UBERON:0004786!9.15e-15!13;UBERON:0000160!6.98e-12!43;UBERON:0003350!7.57e-10!9;UBERON:0004808!7.57e-10!9;UBERON:0001277!7.57e-10!9;UBERON:0000485!1.12e-09!11;UBERON:0004923!1.15e-08!24;UBERON:0005409!9.03e-08!59|ontology_enrichment_uberon_v019_2=UBERON:0001242,9.30e-18,13;UBERON:0001262,9.30e-18,13;UBERON:0004786,9.30e-18,13;UBERON:0000344,2.63e-15,15;UBERON:0000160,9.24e-12,31;UBERON:0001155,2.76e-11,2;UBERON:0000059,2.76e-11,2;UBERON:0000165,1.36e-10,2;UBERON:0000166,1.36e-10,2;UBERON:0000930,1.36e-10,2;UBERON:0004923,2.59e-09,24;UBERON:0003350,4.75e-09,9;UBERON:0004808,4.75e-09,9;UBERON:0001277,4.75e-09,9;UBERON:0000485,1.98e-07,11;UBERON:0005409,2.40e-07,47;UBERON:0000331,4.30e-07,3;UBERON:0002116,4.30e-07,3;UBERON:0001204,4.30e-07,3;UBERON:0001168,4.30e-07,3|phase1_expression=0,0,1.36499771816861,1.20985684522732,2.00358291978539,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.159992422793407,0.22940928106717,2.8711598205751,0.430761996159075,0.646413698057667,0.380046838912748,1.00812051903972,1.10865255327652,0,0,0,0.288851619751275,1.16364251750945,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,1.10115880999389,0.255374676170375,0,0,0,0,1.3959149950069,0,0.15279824777681,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0.292780797011547,0,1.27728527604296,0,0,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0.162137619091711,0.292399974850665,0,0,0.210289948564127,0,1.65209391491899,0.528901133327089,0,0,0,0,0,0.380451252225118,0,0,0,0.397912944082302,0.19496408711912,0.898819408654221,0.216138049874694,0.796565093017469,0,0.114248512609729,0,0.407302655690628,0.775809948670503,0.98190147846446,0.948548056863859,1.03327103585722,1.8839847340965,2.34454611451421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,1.60550589987792,0.586058432961016,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0.582961673259701,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518459893167171,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38581844092741,0,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p5@Atp1b1}} | ||
|EntrezGene=11931 | |||
|HGNC= | |||
|UniProt=P14094,Q545P0 | |||
|association_with_transcript=-370bp_to_ENSMUST00000027863,NM_009721,uc007dip.1_5end | |||
|description=CAGE_peak_5_at_Atp1b1_5end | |||
|id=chr1:166388856..166388868,- | |||
|ontology_enrichment_celltype=CL:0002563!7.57e-10!9;CL:0002251!7.57e-10!9;CL:0000075!1.73e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.75e-09,9;CL:0002251,4.75e-09,9;CL:0000239,4.32e-08,6;CL:0000677,4.32e-08,6;CL:0000584,4.32e-08,6;CL:0000075,5.34e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.88e-16!15;UBERON:0001242!9.15e-15!13;UBERON:0000060!9.15e-15!13;UBERON:0001262!9.15e-15!13;UBERON:0004786!9.15e-15!13;UBERON:0000160!6.98e-12!43;UBERON:0003350!7.57e-10!9;UBERON:0004808!7.57e-10!9;UBERON:0001277!7.57e-10!9;UBERON:0000485!1.12e-09!11;UBERON:0004923!1.15e-08!24;UBERON:0005409!9.03e-08!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,9.30e-18,13;UBERON:0001262,9.30e-18,13;UBERON:0004786,9.30e-18,13;UBERON:0000344,2.63e-15,15;UBERON:0000160,9.24e-12,31;UBERON:0001155,2.76e-11,2;UBERON:0000059,2.76e-11,2;UBERON:0000165,1.36e-10,2;UBERON:0000166,1.36e-10,2;UBERON:0000930,1.36e-10,2;UBERON:0004923,2.59e-09,24;UBERON:0003350,4.75e-09,9;UBERON:0004808,4.75e-09,9;UBERON:0001277,4.75e-09,9;UBERON:0000485,1.98e-07,11;UBERON:0005409,2.40e-07,47;UBERON:0000331,4.30e-07,3;UBERON:0002116,4.30e-07,3;UBERON:0001204,4.30e-07,3;UBERON:0001168,4.30e-07,3 | |||
|phase1_expression=0,0,1.36499771816861,1.20985684522732,2.00358291978539,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.159992422793407,0.22940928106717,2.8711598205751,0.430761996159075,0.646413698057667,0.380046838912748,1.00812051903972,1.10865255327652,0,0,0,0.288851619751275,1.16364251750945,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,1.10115880999389,0.255374676170375,0,0,0,0,1.3959149950069,0,0.15279824777681,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0.292780797011547,0,1.27728527604296,0,0,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0.162137619091711,0.292399974850665,0,0,0.210289948564127,0,1.65209391491899,0.528901133327089,0,0,0,0,0,0.380451252225118,0,0,0,0.397912944082302,0.19496408711912,0.898819408654221,0.216138049874694,0.796565093017469,0,0.114248512609729,0,0.407302655690628,0.775809948670503,0.98190147846446,0.948548056863859,1.03327103585722,1.8839847340965,2.34454611451421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,1.60550589987792,0.586058432961016,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0.582961673259701,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518459893167171,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38581844092741,0,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p5@Atp1b1 | |||
}} |
Revision as of 19:31, 13 September 2013
Short description: | p5@Atp1b1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Atp1b1_5end |
Coexpression cluster: | NA |
Association with transcript: | -370bp_to_ENSMUST00000027863, NM_009721, uc007dip.1_5end |
EntrezGene: | Atp1b1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.75e-09 | 9 |
epithelial cell of alimentary canal | 4.75e-09 | 9 |
brush border epithelial cell | 4.32e-08 | 6 |
gut absorptive cell | 4.32e-08 | 6 |
enterocyte | 4.32e-08 | 6 |
columnar/cuboidal epithelial cell | 5.34e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 9.30e-18 | 13 |
wall of intestine | 9.30e-18 | 13 |
gastrointestinal system mucosa | 9.30e-18 | 13 |
mucosa | 2.63e-15 | 15 |
intestine | 9.24e-12 | 31 |
colon | 2.76e-11 | 2 |
large intestine | 2.76e-11 | 2 |
mouth | 1.36e-10 | 2 |
oral opening | 1.36e-10 | 2 |
stomodeum | 1.36e-10 | 2 |
organ component layer | 2.59e-09 | 24 |
epithelium of mucosa | 4.75e-09 | 9 |
gastrointestinal system epithelium | 4.75e-09 | 9 |
intestinal epithelium | 4.75e-09 | 9 |
simple columnar epithelium | 1.98e-07 | 11 |
gastrointestinal system | 2.40e-07 | 47 |
ileal mucosa | 4.30e-07 | 3 |
ileum | 4.30e-07 | 3 |
mucosa of small intestine | 4.30e-07 | 3 |
wall of small intestine | 4.30e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.