FFCP PHASE1:Mm9::chr2:173101948..173101953,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=65112|HGNC=|MCL_coexpression_id=2339|UniProt=A2APF4,E9QA78|association_with_transcript=80bp_to_ENSMUST00000036248,ENSMUST00000167854,NM_022995,uc008odq.1_5end|description=CAGE_peak_3_at_Pmepa1_5end|id=chr2:173101948..173101953,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,8.83e-10,9;CL:0000333,2.37e-07,10;CL:0000095,2.37e-07,10;CL:0000243,2.37e-07,10;CL:0000123,2.37e-07,10;CL:0000125,2.37e-07,10;CL:0000030,2.37e-07,10;CL:0000339,2.37e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!1.06e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000010,3.86e-12,11;UBERON:0002410,8.83e-10,9|phase1_expression=1.28119077683835,1.04692622291808,0,0,0,0.16787927191189,0.233612640595526,1.03298658753261,5.490760163915,5.61754863172784,0.171217968225505,0.0797721589953364,0.171200729931206,0.262261207256992,0,0,0,0,0,0.42438965179803,0.680346321208558,0,0.261199789138935,0.639969691173627,0.91763712426868,0,0,0.215471232685889,0,0.252030129759931,0.443461021310609,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.506884656097573,0.917733760808408,7.04152209913235,0.65407546914134,3.51497892375155,0.777719596297134,1.81982348112971,2.87505128729943,0.335565212115473,2.17608642603403,4.03312558970957,4.88792928468299,3.43840127926508,7.21940929188419,0.202316460859598,0,0,8.13226876965917,8.00365316500025,1.3498495759221,0,2.8419204597844,7.19040265244171,7.30014780110954,0.103689612308478,0.405017814995072,0.210324961351382,0,0,0.122490799214954,0.479227355091182,0.919218786610021,0,0.255374676170375,0.307213066512487,0.263772575460388,0,0,0.837548997004143,0,0.916789486660861,0,0.427115042397309,0.186399445825301,9.54150035998119,7.63272757078534,0,0.860423876981386,1.3599426674155,0,0,0,0.421333260395256,1.02258193546835,1.03914401841148,0.70667914902068,1.54927761754349,0,0,0,6.71122227134764,3.04031838570118,6.57181778519218,0.34255163915718,0,0.593768556259299,0.520455980298408,0.304465478312141,0.230615497256059,0.753613202763113,0.587943535678524,0.251333182659351,0.247194967734374,6.07317299063629,1.76922110389975,0.808834249737046,0.883366073841574,0.484875253135222,0,0,0,0.255457055208591,0.479260498023681,0.599902730993408,0.254140454146129,0.149790639404823,0.457500602818626,0.502617408451458,0.695297280769106,0.511430914660661,0.62336413367868,0.324482526135515,2.03678727700633,0.995255764880744,0.758168275301024,0.841767423545896,0.650602214813519,1.37941262660084,2.34080768746954,1.80845781402858,8.77670839052129,4.99643509110914,6.37171727006156,0.258703370739016,0,0.189106080167819,0.351902248327898,1.97276159184817,1.11218899690239,0.348252166522167,0.61734640922383,0.995171334092466,0,0,0,0.207125772535502,0.469052119962192,1.44049649168812,0.473489471170421,0.393528463494808,0.308534225774757,0,1.3413670069981,0.233530684734339,0.987359099480883,0.32833492815819,1.05389452409612,1.16959989940266,0,0.402619256281115,0.210289948564127,0.102904612379284,0.660837565967596,0,1.06644125267617,0.232236671860439,0.644337306610467,1.00841762311671,0.667134131534611,0.570676878337677,0,0.494096864172033,1.25667604400135,0.795825888164603,0.974820435595601,0.898819408654221,0.864552199498777,0.398282546508734,0.569003702859245,0.456994050438915,1.1270773567308,0.610953983535943,0.387904974335251,0.631222379012867,1.26473074248515,0.590440591918409,0.627994911365499,0.370191491765402,0,0,0.589676985339609,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.554259570499814,0.37898282354097,0.488894929326078,0.339490171550376,0.469380496577004,0.837531287209079,0.476087281772027,0.585400943573396,0.945810864637146,1.7717175171902,1.11618338060241,0.327726629431476,0.690739927463582,1.01254341007058,0,0,1.47529281905711,0.827810238914197,0.321101179975584,0.468846746368813,0.327869890753351,0.504941854408746,2.52406575533005,2.34263246577983,4.95473814785438,1.67278158566786,3.56477878531831,4.52922449262132,2.83367491172426,5.84511715822624,7.11518000303742,0,0.851640511249612,0.712262414669021,0.488660878060728,0.659880491890142,1.32745138339963,0.242780636154981,0,0.188605079755898,0.885905678642318,0.307435147943927,0.516856586336442,0,1.42598951353889,0.632073515871632,0,2.06271086496374,0.680879211507576,0.540183282093931,0.517434735131018,1.50035924522115,0.709360934569094,1.60531935841864,0.822745103010605,1.522324745573,0.23467170806371,0.63549621259146,0,1.81374878235628,0.968786560175433,4.04096597018644,1.43246812803764,1.47726809770555,1.1659233465194,0.370850604021019,0,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0,1.35982743995084,0.979660166265606,0.552799895217695,0,0.316335993581135,0.813277868507395,0.432021363287205,0.627264888043406,0.87345025498471,0.809186078308924,1.40510874733071,0.523511883968059,0.90730481304255,1.24267862617385,0,0.448549638131936,0.330916980914195,0.194451188344048,0.645799117388655,0.675824501963113,0.58678619322877,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| ||
|EntrezGene=65112 | |||
|HGNC= | |||
|MCL_coexpression_id=2339 | |||
|UniProt=A2APF4,E9QA78 | |||
|association_with_transcript=80bp_to_ENSMUST00000036248,ENSMUST00000167854,NM_022995,uc008odq.1_5end | |||
|description=CAGE_peak_3_at_Pmepa1_5end | |||
|id=chr2:173101948..173101953,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,8.83e-10,9;CL:0000333,2.37e-07,10;CL:0000095,2.37e-07,10;CL:0000243,2.37e-07,10;CL:0000123,2.37e-07,10;CL:0000125,2.37e-07,10;CL:0000030,2.37e-07,10;CL:0000339,2.37e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.06e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,3.86e-12,11;UBERON:0002410,8.83e-10,9 | |||
|phase1_expression=1.28119077683835,1.04692622291808,0,0,0,0.16787927191189,0.233612640595526,1.03298658753261,5.490760163915,5.61754863172784,0.171217968225505,0.0797721589953364,0.171200729931206,0.262261207256992,0,0,0,0,0,0.42438965179803,0.680346321208558,0,0.261199789138935,0.639969691173627,0.91763712426868,0,0,0.215471232685889,0,0.252030129759931,0.443461021310609,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.506884656097573,0.917733760808408,7.04152209913235,0.65407546914134,3.51497892375155,0.777719596297134,1.81982348112971,2.87505128729943,0.335565212115473,2.17608642603403,4.03312558970957,4.88792928468299,3.43840127926508,7.21940929188419,0.202316460859598,0,0,8.13226876965917,8.00365316500025,1.3498495759221,0,2.8419204597844,7.19040265244171,7.30014780110954,0.103689612308478,0.405017814995072,0.210324961351382,0,0,0.122490799214954,0.479227355091182,0.919218786610021,0,0.255374676170375,0.307213066512487,0.263772575460388,0,0,0.837548997004143,0,0.916789486660861,0,0.427115042397309,0.186399445825301,9.54150035998119,7.63272757078534,0,0.860423876981386,1.3599426674155,0,0,0,0.421333260395256,1.02258193546835,1.03914401841148,0.70667914902068,1.54927761754349,0,0,0,6.71122227134764,3.04031838570118,6.57181778519218,0.34255163915718,0,0.593768556259299,0.520455980298408,0.304465478312141,0.230615497256059,0.753613202763113,0.587943535678524,0.251333182659351,0.247194967734374,6.07317299063629,1.76922110389975,0.808834249737046,0.883366073841574,0.484875253135222,0,0,0,0.255457055208591,0.479260498023681,0.599902730993408,0.254140454146129,0.149790639404823,0.457500602818626,0.502617408451458,0.695297280769106,0.511430914660661,0.62336413367868,0.324482526135515,2.03678727700633,0.995255764880744,0.758168275301024,0.841767423545896,0.650602214813519,1.37941262660084,2.34080768746954,1.80845781402858,8.77670839052129,4.99643509110914,6.37171727006156,0.258703370739016,0,0.189106080167819,0.351902248327898,1.97276159184817,1.11218899690239,0.348252166522167,0.61734640922383,0.995171334092466,0,0,0,0.207125772535502,0.469052119962192,1.44049649168812,0.473489471170421,0.393528463494808,0.308534225774757,0,1.3413670069981,0.233530684734339,0.987359099480883,0.32833492815819,1.05389452409612,1.16959989940266,0,0.402619256281115,0.210289948564127,0.102904612379284,0.660837565967596,0,1.06644125267617,0.232236671860439,0.644337306610467,1.00841762311671,0.667134131534611,0.570676878337677,0,0.494096864172033,1.25667604400135,0.795825888164603,0.974820435595601,0.898819408654221,0.864552199498777,0.398282546508734,0.569003702859245,0.456994050438915,1.1270773567308,0.610953983535943,0.387904974335251,0.631222379012867,1.26473074248515,0.590440591918409,0.627994911365499,0.370191491765402,0,0,0.589676985339609,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.554259570499814,0.37898282354097,0.488894929326078,0.339490171550376,0.469380496577004,0.837531287209079,0.476087281772027,0.585400943573396,0.945810864637146,1.7717175171902,1.11618338060241,0.327726629431476,0.690739927463582,1.01254341007058,0,0,1.47529281905711,0.827810238914197,0.321101179975584,0.468846746368813,0.327869890753351,0.504941854408746,2.52406575533005,2.34263246577983,4.95473814785438,1.67278158566786,3.56477878531831,4.52922449262132,2.83367491172426,5.84511715822624,7.11518000303742,0,0.851640511249612,0.712262414669021,0.488660878060728,0.659880491890142,1.32745138339963,0.242780636154981,0,0.188605079755898,0.885905678642318,0.307435147943927,0.516856586336442,0,1.42598951353889,0.632073515871632,0,2.06271086496374,0.680879211507576,0.540183282093931,0.517434735131018,1.50035924522115,0.709360934569094,1.60531935841864,0.822745103010605,1.522324745573,0.23467170806371,0.63549621259146,0,1.81374878235628,0.968786560175433,4.04096597018644,1.43246812803764,1.47726809770555,1.1659233465194,0.370850604021019,0,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0,1.35982743995084,0.979660166265606,0.552799895217695,0,0.316335993581135,0.813277868507395,0.432021363287205,0.627264888043406,0.87345025498471,0.809186078308924,1.40510874733071,0.523511883968059,0.90730481304255,1.24267862617385,0,0.448549638131936,0.330916980914195,0.194451188344048,0.645799117388655,0.675824501963113,0.58678619322877,0.2604087696879,0.524296722128554,0.241584120826006,0,0,0.608175645870493,0.205421914329655,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0.226730383615211,0.443971906748129,0.538283139656854,0.503653849092235,1.9318959403219,1.31377732815827,1.83151624267265,2.35805216986972,0.501572104035363,0.564751842617067,0.460325236507177,0,0.171853182343688,1.37016503954128,0,0.675022500231806,0,0,1.03552062350364,0.207574695168353,1.99512436700516,0.341467211508268,0.729320151204882,0.209613162627982,0.551530525350042,0.222246727801615,1.23621034343337,0.962757628775446,0.758091635291392,1.2673964994512,0.565879024158229,0.842773567228942,0.57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| |||
|short_description=p3@Pmepa1 | |||
}} | |||
Revision as of 23:06, 13 September 2013
| Short description: | p3@Pmepa1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Pmepa1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2339 |
| Association with transcript: | 80bp_to_ENSMUST00000036248, ENSMUST00000167854, NM_022995, uc008odq.1_5end |
| EntrezGene: | Pmepa1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| autonomic neuron | 8.83e-10 | 9 |
| migratory neural crest cell | 2.37e-07 | 10 |
| neuron associated cell | 2.37e-07 | 10 |
| glial cell (sensu Vertebrata) | 2.37e-07 | 10 |
| neuron associated cell (sensu Vertebrata) | 2.37e-07 | 10 |
| glial cell | 2.37e-07 | 10 |
| glioblast | 2.37e-07 | 10 |
| glioblast (sensu Vertebrata) | 2.37e-07 | 10 |
| Ontology term | p-value | n |
|---|---|---|
| peripheral nervous system | 3.86e-12 | 11 |
| autonomic nervous system | 8.83e-10 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
