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FFCP PHASE1:Mm9::chr13:56804344..56804473,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=17129|HGNC=|UniProt=P97454,E9QAA6,Q9CRR7|association_with_transcript=0bp_to_ENSMUST00000069557,ENSMUST00000109876,ENSMUST00000132302,ENSMUST00000138677,ENSMUST00000166870,NM_001164041,NM_008541,uc007qsw.2,uc007qsx.2,uc007qsy.2,uc007qsz.2_5end|description=CAGE_peak_1_at_Smad5_5end|id=chr13:56804344..56804473,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!1.54e-07!14;UBERON:0000117!1.54e-07!14;UBERON:0000171!1.54e-07!14;UBERON:0000170!1.54e-07!14;UBERON:0005597!1.54e-07!14;UBERON:0000118!1.54e-07!14;UBERON:0003102!1.75e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.54e-07,14;UBERON:0000117,1.54e-07,14;UBERON:0000171,1.54e-07,14;UBERON:0000170,1.54e-07,14;UBERON:0005597,1.54e-07,14;UBERON:0000118,1.54e-07,14;UBERON:0003102,6.94e-07,22;UBERON:0005157,6.97e-07,20|phase1_expression=32.670364809378,5.93258192986914,7.73498706962211,10.5862473957391,9.5170188689806,7.05092942029937,9.34450562382103,29.1818710977962,30.5511527069117,35.811872527265,17.1217968225505,25.7664073554937,27.5633175189241,34.793320162761,10.3264026162855,6.47920855647443,6.29605690315332,17.3504190947031,20.1558217400436,12.3072999021429,25.5129870453209,34.1560872131045,39.1799683708403,10.3995074815714,7.11168771308227,2.8711598205751,6.8921919385452,9.26526300549323,12.9215925230334,9.07308467135751,7.98229838359097,12.7006134691926,7.38077745101484,0,8.08784535303569,8.31173226792462,7.14592746918292,3.34825304589526,7.0320181007142,8.37637990358077,3.52938892818609,2.73218193983378,2.91306211818692,22.5355304176283,25.2428558736591,17.2533947031981,19.559783608701,18.9681886050988,17.1355222532888,20.609569301874,21.2779360870551,10.062679505548,16.6104779997159,26.8383992544197,20.5017217476903,21.8670520630555,25.7880095944881,19.0798674142654,24.8849246857305,21.1596391708813,27.2547503507657,10.5041804941431,7.11435836888911,4.49949858640699,5.93319817540185,4.9733608046227,13.1824048628098,19.5951335713993,49.8747035203778,49.0071556144037,42.6959671543305,14.568200204594,19.6573001446936,37.237202961346,41.8844708349693,46.8801581171111,12.1127469099328,19.2807880508633,20.4296689230804,24.2670769423557,28.1781942295422,29.1711487511786,22.6138229191119,19.6966913511088,21.0861581931998,25.9273155216828,29.7556812870125,28.1463163196204,28.6245010799436,25.6187588762003,32.4648227345879,19.7897491705719,19.7191686775248,14.5719861742211,15.5946340187441,20.6092368064774,18.679107877523,24.5419664512403,21.5622383820381,25.4404493647445,15.3519327556582,12.8326477414318,12.7402619853323,0,12.123498296628,10.8944742154292,13.1436355703844,19.7538111913974,65.7702224463816,28.6493328395112,23.0735484598961,16.7456013071678,19.1410862722529,19.4432206312883,32.1017170480474,36.1919783029465,37.5736350956248,55.5261530572461,29.1921482143459,34.4563390387982,29.5927634736927,34.4261429726008,14.9113408974498,28.6925181071316,23.458031163107,13.7946809812639,23.0045039051367,14.3976655438418,23.1267813272978,16.926342252745,20.1300265240196,31.1622793239904,14.2535942557667,10.9957646652042,21.4021685896347,15.2506787283692,54.1785415683683,28.115975357881,24.0086620511991,27.1469994093551,27.5855339080932,22.0706020256134,31.5108727159361,27.2775720282644,39.9374250018295,35.1031593580488,37.1058829256526,22.5071932542944,50.6584783392179,61.2703699743734,46.4510967792825,42.5239720909495,33.0876226578461,42.1385121491822,47.5356735102349,60.7054513796404,11.937624184325,9.52187256324446,15.344828967362,22.9909607514407,26.735970837845,26.1089989118472,33.8544971886851,29.3178705303632,26.9967447552912,27.6715394252985,28.7052539497593,38.0655016116973,27.4814949355512,43.8327129091184,41.5072304874781,32.8949971706998,31.1761163713292,33.6858111088533,14.2997165023607,34.6788543718189,7.93005079161115,11.3713743665324,41.3779206038354,34.6032641072053,36.2117566315082,27.8323263980213,22.0154263406422,22.446623881282,17.0830462156024,22.2343588877415,24.1281800448259,22.48208134065,24.7604390641283,17.0775687644302,16.6426298403515,20.7106924184542,48.5549826439889,38.2732517242592,50.7184810528862,42.1558248639801,39.5663073821957,49.8665679420165,48.3759509000568,36.0168761070229,30.3007544733853,26.4069930792653,22.5303996586233,15.3497497258807,15.1350426237166,11.4679677316275,12.3744674046987,12.7823894668781,9.93040821947537,19.2756412092043,16.3756579042786,17.5719304440372,24.4405951096503,22.3284568601102,24.9630138491648,27.7836765741823,21.5276896226295,22.6748455040783,34.1793401808219,31.0765915303595,52.4747224143323,37.1741737847662,45.0605276713924,54.6070399260319,55.9402556082132,46.8320754858717,56.7486518782288,55.3661724121937,60.9117216271601,38.5078789581984,34.1916264094473,39.6338420513342,9.04747703635634,7.07077388964322,25.5717421969899,34.4920932880916,20.871576698413,15.9407893765396,25.245981588008,27.5193310652767,29.3422644057119,29.67334456654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|EntrezGene=17129
|HGNC=
|UniProt=P97454,E9QAA6,Q9CRR7
|association_with_transcript=0bp_to_ENSMUST00000069557,ENSMUST00000109876,ENSMUST00000132302,ENSMUST00000138677,ENSMUST00000166870,NM_001164041,NM_008541,uc007qsw.2,uc007qsx.2,uc007qsy.2,uc007qsz.2_5end
|description=CAGE_peak_1_at_Smad5_5end
|id=chr13:56804344..56804473,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002048!1.54e-07!14;UBERON:0000117!1.54e-07!14;UBERON:0000171!1.54e-07!14;UBERON:0000170!1.54e-07!14;UBERON:0005597!1.54e-07!14;UBERON:0000118!1.54e-07!14;UBERON:0003102!1.75e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.54e-07,14;UBERON:0000117,1.54e-07,14;UBERON:0000171,1.54e-07,14;UBERON:0000170,1.54e-07,14;UBERON:0005597,1.54e-07,14;UBERON:0000118,1.54e-07,14;UBERON:0003102,6.94e-07,22;UBERON:0005157,6.97e-07,20
|phase1_expression=32.670364809378,5.93258192986914,7.73498706962211,10.5862473957391,9.5170188689806,7.05092942029937,9.34450562382103,29.1818710977962,30.5511527069117,35.811872527265,17.1217968225505,25.7664073554937,27.5633175189241,34.793320162761,10.3264026162855,6.47920855647443,6.29605690315332,17.3504190947031,20.1558217400436,12.3072999021429,25.5129870453209,34.1560872131045,39.1799683708403,10.3995074815714,7.11168771308227,2.8711598205751,6.8921919385452,9.26526300549323,12.9215925230334,9.07308467135751,7.98229838359097,12.7006134691926,7.38077745101484,0,8.08784535303569,8.31173226792462,7.14592746918292,3.34825304589526,7.0320181007142,8.37637990358077,3.52938892818609,2.73218193983378,2.91306211818692,22.5355304176283,25.2428558736591,17.2533947031981,19.559783608701,18.9681886050988,17.1355222532888,20.609569301874,21.2779360870551,10.062679505548,16.6104779997159,26.8383992544197,20.5017217476903,21.8670520630555,25.7880095944881,19.0798674142654,24.8849246857305,21.1596391708813,27.2547503507657,10.5041804941431,7.11435836888911,4.49949858640699,5.93319817540185,4.9733608046227,13.1824048628098,19.5951335713993,49.8747035203778,49.0071556144037,42.6959671543305,14.568200204594,19.6573001446936,37.237202961346,41.8844708349693,46.8801581171111,12.1127469099328,19.2807880508633,20.4296689230804,24.2670769423557,28.1781942295422,29.1711487511786,22.6138229191119,19.6966913511088,21.0861581931998,25.9273155216828,29.7556812870125,28.1463163196204,28.6245010799436,25.6187588762003,32.4648227345879,19.7897491705719,19.7191686775248,14.5719861742211,15.5946340187441,20.6092368064774,18.679107877523,24.5419664512403,21.5622383820381,25.4404493647445,15.3519327556582,12.8326477414318,12.7402619853323,0,12.123498296628,10.8944742154292,13.1436355703844,19.7538111913974,65.7702224463816,28.6493328395112,23.0735484598961,16.7456013071678,19.1410862722529,19.4432206312883,32.1017170480474,36.1919783029465,37.5736350956248,55.5261530572461,29.1921482143459,34.4563390387982,29.5927634736927,34.4261429726008,14.9113408974498,28.6925181071316,23.458031163107,13.7946809812639,23.0045039051367,14.3976655438418,23.1267813272978,16.926342252745,20.1300265240196,31.1622793239904,14.2535942557667,10.9957646652042,21.4021685896347,15.2506787283692,54.1785415683683,28.115975357881,24.0086620511991,27.1469994093551,27.5855339080932,22.0706020256134,31.5108727159361,27.2775720282644,39.9374250018295,35.1031593580488,37.1058829256526,22.5071932542944,50.6584783392179,61.2703699743734,46.4510967792825,42.5239720909495,33.0876226578461,42.1385121491822,47.5356735102349,60.7054513796404,11.937624184325,9.52187256324446,15.344828967362,22.9909607514407,26.735970837845,26.1089989118472,33.8544971886851,29.3178705303632,26.9967447552912,27.6715394252985,28.7052539497593,38.0655016116973,27.4814949355512,43.8327129091184,41.5072304874781,32.8949971706998,31.1761163713292,33.6858111088533,14.2997165023607,34.6788543718189,7.93005079161115,11.3713743665324,41.3779206038354,34.6032641072053,36.2117566315082,27.8323263980213,22.0154263406422,22.446623881282,17.0830462156024,22.2343588877415,24.1281800448259,22.48208134065,24.7604390641283,17.0775687644302,16.6426298403515,20.7106924184542,48.5549826439889,38.2732517242592,50.7184810528862,42.1558248639801,39.5663073821957,49.8665679420165,48.3759509000568,36.0168761070229,30.3007544733853,26.4069930792653,22.5303996586233,15.3497497258807,15.1350426237166,11.4679677316275,12.3744674046987,12.7823894668781,9.93040821947537,19.2756412092043,16.3756579042786,17.5719304440372,24.4405951096503,22.3284568601102,24.9630138491648,27.7836765741823,21.5276896226295,22.6748455040783,34.1793401808219,31.0765915303595,52.4747224143323,37.1741737847662,45.0605276713924,54.6070399260319,55.9402556082132,46.8320754858717,56.7486518782288,55.3661724121937,60.9117216271601,38.5078789581984,34.1916264094473,39.6338420513342,9.04747703635634,7.07077388964322,25.5717421969899,34.4920932880916,20.871576698413,15.9407893765396,25.245981588008,27.5193310652767,29.3422644057119,29.6733445665445,36.1911308191102,35.8453196928828,35.8705865272655,38.4984081872812,35.2185310457158,28.6410740753086,33.5994611254545,26.9909905794318,49.3951496524775,48.4338441974934,76.3939839368272,57.2446326714698,29.2039304347918,32.5326052447675,24.7905316711096,28.1021568836288,24.8053590019849,27.3617281670095,25.3259727304857,38.5345753246156,30.658774541086,27.8112346983518,21.0837217149998,25.7838858120467,29.9586853063333,26.8291030106652,24.8368672862889,29.5785108343597,32.9852834574629,34.4251817971996,29.1251766465754,26.4884505729701,27.4565898434541,27.5381692122966,20.9501978152214,75.0232450883734,62.0023398512277,59.8907344536588,43.4515332171417,39.0655341393246,19.2377352175701,26.1449675834819,15.036637510211,50.5647826509895,35.5573492549846,12.809055076319,17.9069438314543,13.7266903923914,35.8654487287035,30.5094166065574,36.208393136759,23.8667654503778,42.2308551430816,40.6638934253697,31.4295541791442,25.5087721137652,28.8238584144954,29.2655631655061,36.2022136076971,23.5580347785627,19.8310909136443,22.9895545842163,25.3661822407886,51.7327249312167,38.7172867669608,37.9179817270893,32.4191156929105,29.9052342118677,38.3758170371615,35.1551839078665,28.5217416837934,20.5346502702105,22.1783104818556,29.3890342184206,21.6915980360476,25.2668954625475,20.267648384536,22.7363903497701,26.0272574763457,27.164171591513,29.8332844892646,30.8957336841332,30.8637566952749,28.0296794680417,30.0170272678437,22.8022064687581,29.5698562519369,44.4391551885814,16.4269605496808,23.8638858581205,15.7811539382234,32.8422309854724,37.7241775656876,39.1944475931947,29.368467933832,32.1006146582633,12.4245405375755,9.20650473014354,14.3223878359849,10.6548973053086,6.85082519770642,16.6186657425734,5.40018000185445,9.90706647093285,13.1411298605419,9.83744592328458,41.6187263812548,46.6859101879206,28.5125121609404,30.3883396335368,31.0227480689414,21.6935339971017,28.2253344308051,28.6388729562063,23.7480215097943,30.3236654116557,23.3200955899021,29.614335597614,31.1826219874708,33.6132050125564,34.6910232491904,30.0065025508336,32.2158426126698,33.5662043606847,24.3130681473951,32.3837624295674,24.0008476669791,26.9763225362193,33.1426304026776,23.2554266611726,28.6092516462605,28.0074352121449,29.8172595782619,29.7268773924762,27.7040392245558,19.0788372363631,28.7096743860501,29.0588223007912,17.5969348562966,30.9873682371932,34.9160965875866,31.9757539760571,36.7272625259291,39.5362739448869,34.8144764365295,39.2652726032738,37.7944572061287
|short_description=p1@Smad5
}}

Revision as of 00:53, 13 September 2013

Short description:p1@Smad5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Smad5_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000069557, ENSMUST00000109876, ENSMUST00000132302, ENSMUST00000138677, ENSMUST00000166870, NM_001164041, NM_008541, uc007qsw.2, uc007qsx.2, uc007qsy.2, uc007qsz.2_5end
EntrezGene:Smad5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Smad5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G732.67
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I310.59
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E929.18
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E730.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F235.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E617.12
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F125.77
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E427.56
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E834.79
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.48
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A217.35
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A420.16
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A612.31
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A325.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H234.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I939.18
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D110.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.11
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I16.89
GP2+ M cell, pool3.CNhs13240.11847-124I29.27
Ileum epithelium, pool1.CNhs13199.10252-104B912.92
Ileum epithelium, pool2.CNhs13232.10253-104C19.07
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.70
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G67.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.09
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.31
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.15
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.38
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D822.54
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D925.24
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B317.25
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B719.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C218.97
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B817.14
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C320.61
Mouse Astrocytes, donor2.CNhs12078.11552-120C421.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A216.61
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I926.84
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A120.50
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C121.87
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E125.79
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C519.08
Mouse Granule cells, donor1.CNhs12131.11713-123C324.88
Mouse Granule cells, donor2.CNhs12357.11731-123E321.16
Mouse Granule cells, donor3.CNhs12108.11636-122C727.25
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.50
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C813.18
Mouse Microglia, donor2.CNhs12634.11736-123E819.60
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D549.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F549.01
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D942.70
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D519.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D237.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F241.88
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D646.88
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D720.43
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D424.27
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F428.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D829.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.61
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I621.09
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D625.93
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F629.76
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E128.15
Mouse Schwann, donor1.CNhs12507.11728-123D928.62
Mouse Schwann, donor2.CNhs12573.11746-123F925.62
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G332.46
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F719.79
Mouse hepatocyte, donor1.CNhs13078.11714-123C419.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C814.57
Mouse hepatocyte, donor6.CNhs13090.11822-124F415.59
Mouse hepatocyte, donor8.CNhs13091.11824-124F620.61
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A718.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I724.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E321.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I825.44
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.12
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G313.14
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B619.75
accessory axillary lymph node, adult.CNhs10475.1063-29H965.77
adrenal gland, adult.CNhs10508.49-24D728.65
adrenal gland, embryo E14.CNhs11038.406-44C523.07
adrenal gland, embryo E16.CNhs11004.1254-43D616.75
adrenal gland, embryo E17.CNhs11043.1263-45I119.14
adrenal gland, embryo E18.CNhs11026.1262-18F519.44
adrenal gland, neonate N00.CNhs11191.1311-23C132.10
adrenal gland, neonate N25.CNhs11223.1377-27I336.19
amnion, adult pregnant day17.5.CNhs10488.583-22A837.57
aorta, adult.CNhs10498.46-23H155.53
bone (os femoris), adult.CNhs10483.56-12G229.19
bone (os femoris), neonate N02.CNhs11227.1985-43F534.46
bone (os femoris), neonate N16.CNhs11225.1525-43A629.59
bone (os femoris), neonate N20.CNhs11195.1350-25C334.43
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B228.69
cerebellum, neonate N30.CNhs11135.1395-42I223.46
colon, adult.CNhs10468.36-18H713.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C723.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D114.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D423.13
corpora quadrigemina, adult.CNhs10501.16-22A416.93
corpus striatum, adult.CNhs10487.19-21D820.13
corpus striatum, neonate N00.CNhs11226.630-43F131.16
cortex, adult.CNhs10473.12-14D514.25
cortex, neonate N30.CNhs11107.1392-42F211.00
diencephalon, adult.CNhs10482.20-12F221.40
diencephalon, neonate N30.CNhs11201.1388-42B215.25
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B154.18
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A228.12
epididymis, adult.CNhs10490.58-23B224.01
eyeball, adult.CNhs10484.31-12G427.15
eyeball, embryo E12.CNhs11016.345-16C627.59
eyeball, embryo E14.CNhs10521.399-16E222.07
eyeball, embryo E15.CNhs10593.426-16C931.51
eyeball, embryo E17.CNhs11023.1261-18D427.28
eyeball, neonate N00.CNhs11207.633-15C639.94
eyeball, neonate N01.CNhs11140.1532-43E735.10
eyeball, neonate N02.CNhs11205.1551-44G837.11
eyeball, neonate N16.CNhs11188.777-19A222.51
forelimb, embryo E11.CNhs10596.335-25E250.66
forelimb, embryo E12.CNhs10600.359-14H261.27
forelimb, embryo E13.CNhs10589.384-1E246.45
forelimb, embryo E14.CNhs10577.413-26A842.52
forelimb, embryo E15.CNhs11007.437-20E733.09
forelimb, embryo E17.CNhs10598.1517-43C442.14
forelimb, embryo E18.CNhs11008.1520-43B547.54
gonad, embryo E13.CNhs11044.1564-45I660.71
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.94
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D29.52
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D515.34
heart, embryo E11.CNhs10586.331-24E922.99
heart, embryo E12.CNhs11015.353-12F526.74
heart, embryo E13.CNhs11013.376-3I926.11
heart, embryo E14.CNhs10597.403-26D433.85
heart, embryo E15.CNhs11017.431-16C829.32
heart, embryo E16.CNhs11021.457-17C627.00
heart, embryo E17.CNhs11025.479-18E527.67
heart, embryo E18.CNhs11030.1283-20G328.71
heart, neonate N00.CNhs11213.639-21E338.07
heart, neonate N03.CNhs11221.1349-25I227.48
heart, neonate N10.CNhs11118.749-24G143.83
heart, neonate N16.CNhs11209.782-15G141.51
heart, neonate N20.CNhs11127.821-26I632.89
heart, neonate N25.CNhs11196.1351-25D331.18
heart, neonate N30.CNhs11202.1390-42D233.69
hippocampus, adult.CNhs10478.13-16E814.30
hippocampus, neonate N00.CNhs11228.627-43G134.68
intestinal mucosa, adult.CNhs10506.860-29I37.93
intestine, adult.CNhs10496.178-9A311.37
intestine, embryo E12.CNhs11019.1251-16I541.38
intestine, embryo E13.CNhs11010.381-16D534.60
intestine, embryo E15.CNhs10602.976-16D836.21
intestine, embryo E16.CNhs10585.463-22H427.83
intestine, embryo E17.CNhs10582.482-18D322.02
intestine, embryo E18.CNhs10526.1289-20F722.45
intestine, neonate N00.CNhs11126.644-26D117.08
intestine, neonate N01.CNhs11192.1322-23E922.23
intestine, neonate N06.CNhs11102.688-20B824.13
intestine, neonate N07.CNhs11095.720-20F222.48
intestine, neonate N10.CNhs11098.755-23A524.76
intestine, neonate N20.CNhs11187.827-18D117.08
intestine, neonate N25.CNhs11121.1352-25E316.64
intestine, neonate N30.CNhs11131.1384-42G120.71
kidney, embryo E14.CNhs10606.411-4I948.55
kidney, embryo E15.CNhs10997.434-16F838.27
kidney, embryo E16.CNhs10584.464-22A550.72
kidney, embryo E17.CNhs11028.483-18I242.16
kidney, embryo E18.CNhs11001.1288-20C739.57
kidney, neonate N00.CNhs11214.646-21G749.87
kidney, neonate N10.CNhs11206.758-6D548.38
kidney, neonate N20.CNhs11113.832-19I136.02
kidney, neonate N25.CNhs11122.1353-25F330.30
kidney, neonate N30.CNhs11203.1385-42H126.41
liver, adult pregnant day01.CNhs10466.508-5B222.53
liver, embryo E12.CNhs10601.355-15F815.35
liver, embryo E13.CNhs10524.378-3H615.14
liver, embryo E14.CNhs10594.409-16E111.47
liver, embryo E15.CNhs10520.433-16D712.37
liver, embryo E16.CNhs10523.462-17F512.78
liver, embryo E17.CNhs10510.481-18A39.93
liver, embryo E18.CNhs10579.499-43G419.28
liver, neonate N00.CNhs11117.641-24F416.38
liver, neonate N03.CNhs11123.1345-25G217.57
liver, neonate N06.CNhs11101.684-20A824.44
liver, neonate N07.CNhs11103.716-20H222.33
liver, neonate N10.CNhs11115.751-24B924.96
liver, neonate N20.CNhs11220.823-25A327.78
liver, neonate N25.CNhs11198.1368-26H121.53
liver, neonate N30.CNhs11106.1382-42D122.67
lung, adult.CNhs10474.28-22B134.18
lung, embryo E12.CNhs10522.354-16G231.08
lung, embryo E14.CNhs10604.404-26F852.47
lung, embryo E15.CNhs11020.432-17C537.17
lung, embryo E16.CNhs10998.458-17B645.06
lung, embryo E17.CNhs10605.480-44A654.61
lung, embryo E18.CNhs10583.1287-20I655.94
lung, neonate N00.CNhs11224.640-42C646.83
lung, neonate N06.CNhs11212.683-20E556.75
lung, neonate N07.CNhs11111.715-19A355.37
lung, neonate N10.CNhs11219.750-23E660.91
lung, neonate N20.CNhs11109.822-18A438.51
lung, neonate N25.CNhs11119.1359-25C734.19
lung, neonate N30.CNhs11133.1394-42H239.63
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.07
mammary gland, adult lactating day02.CNhs10480.595-22B625.57
mammary gland, adult pregnant day19.CNhs10476.588-5H234.49
medulla oblongata, adult.CNhs10477.17-12C220.87
medulla oblongata, neonate N30.CNhs11200.1396-42A315.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C725.25
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C227.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E129.34
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E229.67
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E336.19
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D735.85
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D835.87
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D938.50
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D435.22
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D528.64
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D633.60
olfactory brain, adult.CNhs10489.18-22I926.99
ovary, adult.CNhs10507.91-2I749.40
ovary, embryo E18.CNhs11040.505-44H748.43
ovary, neonate N00.CNhs11217.1299-22I476.39
oviduct, adult pregnant day01.CNhs10500.988-6G657.24
pancreas, adult.CNhs10486.34-16E429.20
pancreas, embryo E14.CNhs11012.405-44F432.53
pancreas, embryo E15.CNhs11042.1556-45F224.79
pancreas, embryo E16.CNhs11003.460-26E528.10
pancreas, embryo E17.CNhs10599.1558-45G324.81
pancreas, embryo E18.CNhs10580.1535-43I727.36
pancreas, neonate N00.CNhs11105.645-26G925.33
pancreas, neonate N01.CNhs11138.1531-43D738.53
pancreas, neonate N02.CNhs11139.1539-43D830.66
pancreas, neonate N16.CNhs11136.787-43B627.81
pancreas, neonate N25.CNhs11094.1555-45E221.08
pancreas, neonate N30.CNhs11182.1548-44H525.78
pituitary gland, adult.CNhs10493.21-1G829.96
pituitary gland, embryo E12.CNhs11018.346-16E626.83
pituitary gland, embryo E13.CNhs11009.370-44C724.84
pituitary gland, embryo E14.CNhs11037.398-44A529.58
pituitary gland, embryo E15.CNhs10592.427-16B932.99
pituitary gland, embryo E16.CNhs11036.449-43F634.43
pituitary gland, embryo E17.CNhs11039.1265-44F529.13
pituitary gland, neonate N00.CNhs11190.1308-22E926.49
placenta, adult pregnant day10.CNhs10472.539-13I727.46
placenta, adult pregnant day17.CNhs10464.577-18G327.54
prostate, adult.CNhs10470.859-1F820.95
skin, adult.CNhs10492.30-1C375.02
skin, neonate N00.CNhs11124.650-25G462.00
skin, neonate N03.CNhs11215.662-22H359.89
skin, neonate N06.CNhs11097.693-20I543.45
skin, neonate N10.CNhs11108.762-6C439.07
small intestine, neonate N16.CNhs11114.790-21I119.24
spinal cord, adult.CNhs10505.24-13C926.14
spleen, adult.CNhs10465.25-2G215.04
spleen, embryo E16.CNhs11035.461-43C150.56
spleen, embryo E18.CNhs11011.1271-21F235.56
spleen, neonate N10.CNhs11116.752-24D112.81
spleen, neonate N20.CNhs11112.824-19H117.91
spleen, neonate N25.CNhs11099.1354-25G313.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C635.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C930.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D336.21
stomach, adult.CNhs10503.33-1H623.87
stomach, embryo E12.CNhs10588.356-43E342.23
stomach, embryo E15.CNhs10603.1252-16G840.66
stomach, embryo E16.CNhs11022.459-17D431.43
stomach, embryo E17.CNhs11006.1035-18D525.51
stomach, embryo E18.CNhs10999.1286-20C628.82
stomach, neonate N03.CNhs11193.1340-24B829.27
stomach, neonate N07.CNhs11210.718-18A936.20
stomach, neonate N25.CNhs11104.1355-25E423.56
stomach, neonate N30.CNhs11134.1386-42I119.83
submandibular gland, adult.CNhs10469.59-29C122.99
testis, adult.CNhs10504.57-7G525.37
testis, embryo E13.CNhs11031.389-23F551.73
testis, embryo E15.CNhs11034.443-27C538.72
testis, embryo E16.CNhs11033.470-26G537.92
testis, embryo E17.CNhs11029.486-18I532.42
testis, embryo E18.CNhs11027.503-18G529.91
testis, neonate N00.CNhs11189.1300-22B738.38
testis, neonate N07.CNhs11222.726-26I435.16
testis, neonate N10.CNhs11204.763-44D928.52
testis, neonate N20.CNhs11110.839-18H320.53
testis, neonate N30.CNhs11130.1391-42E222.18
thymus, adult.CNhs10471.38-12B529.39
thymus, embryo E14.CNhs11041.402-44I421.69
thymus, embryo E15.CNhs11005.430-45I225.27
thymus, embryo E16.CNhs11002.456-26C520.27
thymus, embryo E17.CNhs10581.478-18C122.74
thymus, embryo E18.CNhs10595.1273-19G426.03
thymus, neonate N02.CNhs11181.1541-43F827.16
thymus, neonate N03.CNhs11137.2104-43C729.83
thymus, neonate N06.CNhs11197.681-26C430.90
thymus, neonate N07.CNhs11211.713-19D330.86
thymus, neonate N10.CNhs11194.748-24E428.03
thymus, neonate N20.CNhs11186.820-7A230.02
thymus, neonate N25.CNhs11125.1362-25G722.80
thymus, neonate N30.CNhs11132.1393-42G229.57
tongue, adult.CNhs10499.32-1B444.44
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H316.43
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F723.86
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G515.78
urinary bladder, adult.CNhs10481.879-12E432.84
uterus, adult pregnant day19.CNhs10497.590-15F537.72
uterus, adult.CNhs10509.92-27E539.19
vagina, adult.CNhs10502.89-27D529.37
vesicular gland, adult.CNhs10491.51-27F832.10
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.65
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A516.62
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.14
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.84
whole body, embryo E11.CNhs11014.324-5I841.62
whole body, embryo E12.CNhs10587.857-27C946.69
whole body, embryo E13.CNhs10512.372-23H228.51
whole body, embryo E14.5.CNhs10578.420-27D230.39
whole body, embryo E14.CNhs10519.395-14B131.02
whole body, embryo E16.CNhs10514.453-14F221.69
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G528.23
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G528.64
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G523.75
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G530.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G523.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G529.61
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G531.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G533.61
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G534.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G530.01
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G532.22
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G533.57
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G524.31
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G532.38
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G524.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G526.98
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G533.14
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G523.26
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G528.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G528.01
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G529.82
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G529.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G527.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.08
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G528.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G529.06
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G517.60
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G530.99
whole body, embryo E17.5.CNhs10513.490-9F934.92
whole body, embryo E17.CNhs10517.475-3I531.98
whole body, embryo E18.CNhs10516.493-3B336.73
whole body, neonate N00.CNhs10525.657-19C239.54
whole body, neonate N01.CNhs10576.659-23C634.81
whole body, neonate N06.CNhs10515.692-21D139.27
whole body, neonate N10.CNhs10518.761-6B437.79





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
lung1.54e-0714
respiratory tube1.54e-0714
respiration organ1.54e-0714
pair of lungs1.54e-0714
lung primordium1.54e-0714
lung bud1.54e-0714
surface structure6.94e-0722
epithelial fold6.97e-0720







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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