FFCP PHASE1:Mm9::chr4:136442026..136442070,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=12260|HGNC=|MCL_coexpression_id=38|UniProt=P14106,Q3U793|association_with_transcript=21bp_to_NM_009777,uc008vip.1_5end|description=CAGE_peak_1_at_C1qb_5end|id=chr4:136442026..136442070,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!8.29e-11!333;UBERON:0000062!1.71e-09!269;UBERON:0007023!1.97e-08!51;UBERON:0000926!6.85e-08!193;UBERON:0004120!6.85e-08!193;UBERON:0006603!6.85e-08!193;UBERON:0000922!3.19e-07!328;UBERON:0002405!3.31e-07!70;UBERON:0000479!5.84e-07!349;UBERON:0005172!8.21e-07!49;UBERON:0005173!8.21e-07!49;UBERON:0002417!8.21e-07!49;UBERON:0000916!8.21e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.87e-08,51;UBERON:0000479,2.60e-07,349;UBERON:0005172,9.63e-07,49;UBERON:0005173,9.63e-07,49;UBERON:0002417,9.63e-07,49;UBERON:0000916,9.63e-07,49|phase1_expression=13.9329496981171,0,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0.387369970324729,0.422366166455,0.234064526321993,0,0,0,0.262261207256992,76.9483549794181,62.1599070886766,70.6557496909428,20.3473096656063,26.3259712523018,47.5316410013794,18.1992640923289,0.198581902401771,0,2.3998863419011,4.81759490241057,0.57423196411502,0,0.430942465371778,1.33016393619462,1.51218077855958,4.8780712344167,0,0,0,0,0,0,5.02237956884289,2.3440060335714,1.0470474879476,2.35292595212406,2.04913645487534,0.485510353031154,0,0,0,46.1610893165343,1.74420125104357,0.439372365468944,1.55543919259427,5.45947044338914,0,0.838913030288682,0.725362142011344,1.00828139742739,15.9500850342287,36.1032134322833,45.3791441204149,2.42779753031517,4.23192783417626,4.43681982454325,0,0,1729.15730675621,2546.33088360996,2158.43858920625,1128.89321643335,918.665968023837,3.21437798156281,3.91517221161903,3.99617426567626,15.996455126613,18.7738259808871,4.04219637409348,3.35459148563827,0.919218786610021,8.8092704799511,13.4071704989447,15.5142598588806,3.42904348098504,5.03182039813253,2.08365348222704,24.0097379141188,23.6360296213306,18.1829914854404,14.142172102736,13.2405663143166,6.52398060388552,1.74170244666323,2.72057616384428,3.47837386442013,75.717301174362,0.679971333707751,2.15881276655127,11.695975514058,7.16843019355737,35.8133271335967,0,0,0,1.12674735821344,0,0,0,0,0,0,23.0651437032501,109.530724782754,108.065877239192,11.450031566565,19.7902560902892,19.3717017695089,26.6779073778142,31.7489509266403,28.0236498665176,15.5732829672656,67.094101610839,81.3841707793884,21.0296904931632,21.863310327579,20.3647606316793,22.3670113461747,12.296793474485,9.42510180660548,37.5521871156629,0,0,0,29.5087559627501,48.0375632959558,5.02617408451458,31.1145533144175,28.8958466783273,40.7264567336738,27.5810147215188,31.570202793598,38.5661608891288,33.3594041132451,27.1469994093551,7.93734702072493,7.12696523743766,5.58192602396583,8.13806016312861,9.93332887609387,8.07116437794554,10.5882948752494,10.0894314588216,2.58681591519411,4.53854592402766,6.862093842394,18.6316372563439,12.2340789659263,13.5818344943645,21.6071243228341,7.36426787228425,0,0,0,4.55676699578104,7.03578179943289,7.92273070428465,6.62885259638589,11.215561209602,9.10175966035532,7.44108623201305,9.38956904898667,12.8441876603886,12.8356682932515,23.1476124351524,17.0244500046297,28.9475975102158,68.0605357402257,53.2799482478676,26.0759536219518,10.1875566255492,4.62586296177317,15.6025834331491,7.25180051819795,8.82499353069666,9.92279452180119,13.5127961497639,15.1217069814512,18.0714344806931,19.9302205848695,16.9639923365731,19.8554814952213,22.8799942847323,20.0813009732694,17.0775687644302,27.6656703839609,28.2780608021201,5.12103332573321,5.1411830674378,7.88954149711563,5.09128319613286,6.40043207653165,9.8190147846446,6.76630947229553,8.11855813887812,15.2288766006134,8.76119863844784,87.1570723636218,12.1796927172749,17.4937505650751,29.6817988348007,35.094801000211,56.1942782223131,88.8644222717155,86.3088412352432,86.2559406443188,82.3684239564245,34.5043695665651,139.18071442802,95.171490299941,71.2272435810855,48.0785068238725,66.5772059481447,22.909395580659,13.8328730592454,7.65935389277522,8.31750920298422,5.39787571063555,8.87783164441623,15.7108802984769,15.6106918286239,8.51229778173431,8.19419351700467,10.0456504254217,18.8442811923099,31.428666699593,25.8921814860906,146.267545421094,53.8466626980522,53.1105414860559,59.6023372018222,29.8624097377293,22.504643825703,0,28.0242729196854,0,0,0,0,0,0,0,0,0,28.9189184779626,48.8273893116444,24.9291845134157,26.5505743746329,81.1653005024875,13.2745138339963,12.1390318077491,8.46505959501303,10.3732793865744,27.4630760379119,29.821209350561,42.12381178642,34.535704300363,25.6678112436999,21.8065362975713,36.8965130012496,28.8779521094923,21.1072555567349,8.46287141947158,13.8413791647547,11.574199891706,10.2857335512519,18.3719882130133,18.5940393280397,36.5357938937519,4.22409074514679,9.32061111800809,13.8932890774626,29.0199805177005,36.6524248599706,15.2591700068234,16.2346387844266,10.3408766839389,23.3184669303881,43.2040953684488,117.046553346529,30.7516433265202,49.446938807713,45.5851665951352,40.5981856331445,95.858054573533,0,0,0.276399947608848,30.5494597764836,7.27572785236611,12.8091264289915,11.1245501046455,12.1271211688392,18.5608179184251,16.7231789517178,24.0521556160728,40.0486591235565,23.9787700589817,54.0565202385625,1.12738587736838,3.58839710505549,3.30916980914195,3.11121901350476,6.32883135040882,5.4065960157049,8.33236394384853,11.0673727117358,8.28388820963116,9.18019659138823,11.2331702440568,56.2499794718157,17.4343685149541,12.9415806027682,17.9290735709357,14.6801890447335,16.6892338016263,28.8469078847925,15.9504689348543,16.3565648915999,19.96618334361,23.4925011368838,43.4662148099296,40.5051853305787,42.1925616875464,19.0453522236778,0,0.0897138566094757,0,54.8658447051421,98.5332996118705,49.084635303627,19.0787857380369,40.1257683228291,10.7302850097243,20.714635642823,20.0513429703789,15.4667864109319,21.9226406326606,34.7481192799262,21.6007200074178,22.9663813644352,27.1885445390523,32.6188996403647,0.726511433089237,4.78829848081237,11.439151585527,13.8570828728928,19.7036372870303,15.4428547098012,12.8903102124937,15.2465942356782,17.9714757371417,13.3929522234813,19.7713853914387,14.7128546281139,17.510961896868,15.8782377964076,14.4737381768145,13.8125170472091,13.6743504614929,13.5036454324594,16.071350131329,14.4254941731709,16.1148548621145,15.6178709420217,9.53744759789284,11.6277133305863,12.0460006931623,12.8614203995348,15.1830217484401,15.2580432633949,12.9013908153569,14.5896990631012,12.931216975535,14.4801589092078,12.2769312950907,14.0992525479229,21.9913536518501,20.7342779688495,28.3057246218944,34.8091107558243,34.0493231082541,33.0887128679273,28.056008110071|short_description=p1@C1qb}} | ||
|EntrezGene=12260 | |||
|HGNC= | |||
|MCL_coexpression_id=38 | |||
|UniProt=P14106,Q3U793 | |||
|association_with_transcript=21bp_to_NM_009777,uc008vip.1_5end | |||
|description=CAGE_peak_1_at_C1qb_5end | |||
|id=chr4:136442026..136442070,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!8.29e-11!333;UBERON:0000062!1.71e-09!269;UBERON:0007023!1.97e-08!51;UBERON:0000926!6.85e-08!193;UBERON:0004120!6.85e-08!193;UBERON:0006603!6.85e-08!193;UBERON:0000922!3.19e-07!328;UBERON:0002405!3.31e-07!70;UBERON:0000479!5.84e-07!349;UBERON:0005172!8.21e-07!49;UBERON:0005173!8.21e-07!49;UBERON:0002417!8.21e-07!49;UBERON:0000916!8.21e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.87e-08,51;UBERON:0000479,2.60e-07,349;UBERON:0005172,9.63e-07,49;UBERON:0005173,9.63e-07,49;UBERON:0002417,9.63e-07,49;UBERON:0000916,9.63e-07,49 | |||
|phase1_expression=13.9329496981171,0,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0.387369970324729,0.422366166455,0.234064526321993,0,0,0,0.262261207256992,76.9483549794181,62.1599070886766,70.6557496909428,20.3473096656063,26.3259712523018,47.5316410013794,18.1992640923289,0.198581902401771,0,2.3998863419011,4.81759490241057,0.57423196411502,0,0.430942465371778,1.33016393619462,1.51218077855958,4.8780712344167,0,0,0,0,0,0,5.02237956884289,2.3440060335714,1.0470474879476,2.35292595212406,2.04913645487534,0.485510353031154,0,0,0,46.1610893165343,1.74420125104357,0.439372365468944,1.55543919259427,5.45947044338914,0,0.838913030288682,0.725362142011344,1.00828139742739,15.9500850342287,36.1032134322833,45.3791441204149,2.42779753031517,4.23192783417626,4.43681982454325,0,0,1729.15730675621,2546.33088360996,2158.43858920625,1128.89321643335,918.665968023837,3.21437798156281,3.91517221161903,3.99617426567626,15.996455126613,18.7738259808871,4.04219637409348,3.35459148563827,0.919218786610021,8.8092704799511,13.4071704989447,15.5142598588806,3.42904348098504,5.03182039813253,2.08365348222704,24.0097379141188,23.6360296213306,18.1829914854404,14.142172102736,13.2405663143166,6.52398060388552,1.74170244666323,2.72057616384428,3.47837386442013,75.717301174362,0.679971333707751,2.15881276655127,11.695975514058,7.16843019355737,35.8133271335967,0,0,0,1.12674735821344,0,0,0,0,0,0,23.0651437032501,109.530724782754,108.065877239192,11.450031566565,19.7902560902892,19.3717017695089,26.6779073778142,31.7489509266403,28.0236498665176,15.5732829672656,67.094101610839,81.3841707793884,21.0296904931632,21.863310327579,20.3647606316793,22.3670113461747,12.296793474485,9.42510180660548,37.5521871156629,0,0,0,29.5087559627501,48.0375632959558,5.02617408451458,31.1145533144175,28.8958466783273,40.7264567336738,27.5810147215188,31.570202793598,38.5661608891288,33.3594041132451,27.1469994093551,7.93734702072493,7.12696523743766,5.58192602396583,8.13806016312861,9.93332887609387,8.07116437794554,10.5882948752494,10.0894314588216,2.58681591519411,4.53854592402766,6.862093842394,18.6316372563439,12.2340789659263,13.5818344943645,21.6071243228341,7.36426787228425,0,0,0,4.55676699578104,7.03578179943289,7.92273070428465,6.62885259638589,11.215561209602,9.10175966035532,7.44108623201305,9.38956904898667,12.8441876603886,12.8356682932515,23.1476124351524,17.0244500046297,28.9475975102158,68.0605357402257,53.2799482478676,26.0759536219518,10.1875566255492,4.62586296177317,15.6025834331491,7.25180051819795,8.82499353069666,9.92279452180119,13.5127961497639,15.1217069814512,18.0714344806931,19.9302205848695,16.9639923365731,19.8554814952213,22.8799942847323,20.0813009732694,17.0775687644302,27.6656703839609,28.2780608021201,5.12103332573321,5.1411830674378,7.88954149711563,5.09128319613286,6.40043207653165,9.8190147846446,6.76630947229553,8.11855813887812,15.2288766006134,8.76119863844784,87.1570723636218,12.1796927172749,17.4937505650751,29.6817988348007,35.094801000211,56.1942782223131,88.8644222717155,86.3088412352432,86.2559406443188,82.3684239564245,34.5043695665651,139.18071442802,95.171490299941,71.2272435810855,48.0785068238725,66.5772059481447,22.909395580659,13.8328730592454,7.65935389277522,8.31750920298422,5.39787571063555,8.87783164441623,15.7108802984769,15.6106918286239,8.51229778173431,8.19419351700467,10.0456504254217,18.8442811923099,31.428666699593,25.8921814860906,146.267545421094,53.8466626980522,53.1105414860559,59.6023372018222,29.8624097377293,22.504643825703,0,28.0242729196854,0,0,0,0,0,0,0,0,0,28.9189184779626,48.8273893116444,24.9291845134157,26.5505743746329,81.1653005024875,13.2745138339963,12.1390318077491,8.46505959501303,10.3732793865744,27.4630760379119,29.821209350561,42.12381178642,34.535704300363,25.6678112436999,21.8065362975713,36.8965130012496,28.8779521094923,21.1072555567349,8.46287141947158,13.8413791647547,11.574199891706,10.2857335512519,18.3719882130133,18.5940393280397,36.5357938937519,4.22409074514679,9.32061111800809,13.8932890774626,29.0199805177005,36.6524248599706,15.2591700068234,16.2346387844266,10.3408766839389,23.3184669303881,43.2040953684488,117.046553346529,30.7516433265202,49.446938807713,45.5851665951352,40.5981856331445,95.858054573533,0,0,0.276399947608848,30.5494597764836,7.27572785236611,12.8091264289915,11.1245501046455,12.1271211688392,18.5608179184251,16.7231789517178,24.0521556160728,40.0486591235565,23.9787700589817,54.0565202385625,1.12738587736838,3.58839710505549,3.30916980914195,3.11121901350476,6.32883135040882,5.4065960157049,8.33236394384853,11.0673727117358,8.28388820963116,9.18019659138823,11.2331702440568,56.2499794718157,17.4343685149541,12.9415806027682,17.9290735709357,14.6801890447335,16.6892338016263,28.8469078847925,15.9504689348543,16.3565648915999,19.96618334361,23.4925011368838,43.4662148099296,40.5051853305787,42.1925616875464,19.0453522236778,0,0.0897138566094757,0,54.8658447051421,98.5332996118705,49.084635303627,19.0787857380369,40.1257683228291,10.7302850097243,20.714635642823,20.0513429703789,15.4667864109319,21.9226406326606,34.7481192799262,21.6007200074178,22.9663813644352,27.1885445390523,32.6188996403647,0.726511433089237,4.78829848081237,11.439151585527,13.8570828728928,19.7036372870303,15.4428547098012,12.8903102124937,15.2465942356782,17.9714757371417,13.3929522234813,19.7713853914387,14.7128546281139,17.510961896868,15.8782377964076,14.4737381768145,13.8125170472091,13.6743504614929,13.5036454324594,16.071350131329,14.4254941731709,16.1148548621145,15.6178709420217,9.53744759789284,11.6277133305863,12.0460006931623,12.8614203995348,15.1830217484401,15.2580432633949,12.9013908153569,14.5896990631012,12.931216975535,14.4801589092078,12.2769312950907,14.0992525479229,21.9913536518501,20.7342779688495,28.3057246218944,34.8091107558243,34.0493231082541,33.0887128679273,28.056008110071 | |||
|short_description=p1@C1qb | |||
}} | |||
Revision as of 04:09, 14 September 2013
| Short description: | p1@C1qb |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_C1qb_5end |
| Coexpression cluster: | MCL_coexpression_mm9:38 |
| Association with transcript: | 21bp_to_NM_009777, uc008vip.1_5end |
| EntrezGene: | C1qb |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 1.87e-08 | 51 |
| tissue | 2.60e-07 | 349 |
| abdomen element | 9.63e-07 | 49 |
| abdominal segment element | 9.63e-07 | 49 |
| abdominal segment of trunk | 9.63e-07 | 49 |
| abdomen | 9.63e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
