FFCP PHASE1:Mm9::chr8:112522789..112522794,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=111|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:112522789..112522794,+|id=chr8:112522789..112522794,+|ontology_enrichment_celltype=CL:0000181!6.99e-17!5;CL:0000417!6.99e-17!5;CL:0000668!6.99e-17!5;CL:0000412!6.99e-17!5;CL:0000182!6.99e-17!5;CL:0000414!9.31e-08!11|ontology_enrichment_celltype_v019_2=CL:0000182,3.59e-35,5;CL:0000223,3.63e-09,20;CL:0000066,2.10e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!7.45e-37!22;UBERON:0007499!7.45e-37!22;UBERON:0006925!7.45e-37!22;UBERON:0009497!7.45e-37!22;UBERON:0000015!7.45e-37!22;UBERON:0002423!7.45e-37!22;UBERON:0006235!7.45e-37!22;UBERON:0008835!7.45e-37!22;UBERON:0003894!7.45e-37!22;UBERON:0004161!7.45e-37!22;UBERON:0008836!7.45e-37!22;UBERON:0009854!3.56e-35!23;UBERON:0009856!3.56e-35!23;UBERON:0002365!3.22e-32!25;UBERON:0002330!3.22e-32!25;UBERON:0003914!2.88e-16!47;UBERON:0005256!2.88e-16!47;UBERON:0003929!7.08e-16!55;UBERON:0005172!1.59e-15!49;UBERON:0005173!1.59e-15!49;UBERON:0002417!1.59e-15!49;UBERON:0000916!1.59e-15!49;UBERON:0005057!7.71e-15!51;UBERON:0000490!6.97e-13!66;UBERON:0002368!2.55e-12!60;UBERON:0005911!3.13e-12!69;UBERON:0002530!3.21e-11!65;UBERON:0009569!5.09e-11!66;UBERON:0000466!2.10e-10!79;UBERON:0002405!2.83e-10!70;UBERON:0000949!6.20e-10!72;UBERON:0001041!1.28e-08!92;UBERON:0005177!4.19e-08!85;UBERON:0000077!4.60e-08!97;UBERON:0002100!9.35e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.90e-24,22;UBERON:0007499,1.90e-24,22;UBERON:0006925,1.90e-24,22;UBERON:0009497,1.90e-24,22;UBERON:0000015,1.90e-24,22;UBERON:0002423,1.90e-24,22;UBERON:0006235,1.90e-24,22;UBERON:0008835,1.90e-24,22;UBERON:0003894,1.90e-24,22;UBERON:0004161,1.90e-24,22;UBERON:0008836,1.90e-24,22;UBERON:0009854,2.17e-23,23;UBERON:0009856,2.17e-23,23;UBERON:0002365,1.57e-21,25;UBERON:0002330,1.57e-21,25;UBERON:0005256,5.49e-12,45;UBERON:0003914,1.78e-11,47;UBERON:0005172,5.25e-11,49;UBERON:0005173,5.25e-11,49;UBERON:0002417,5.25e-11,49;UBERON:0000916,5.25e-11,49;UBERON:0003929,8.45e-10,55;UBERON:0002368,5.62e-09,60;UBERON:0003104,7.92e-09,61;UBERON:0009142,7.92e-09,61;UBERON:0002530,2.81e-08,65;UBERON:0000490,3.76e-08,66;UBERON:0009569,3.76e-08,66;UBERON:0005911,8.62e-08,69;UBERON:0000949,1.85e-07,72;UBERON:0005177,8.74e-07,79|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,2.03991400112325,4.31762553310254,1.29955283489534,1.34408066129201,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0,0,0,0,0,0,0,4.86405680325106,0.274561413188081,1.43768206527355,0,0.312037673114561,0.252578877947112,0.896987067609561,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr8:112522789..112522794,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=111 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:112522789..112522794,+ | |||
|id=chr8:112522789..112522794,+ | |||
|ontology_enrichment_celltype=CL:0000181!6.99e-17!5;CL:0000417!6.99e-17!5;CL:0000668!6.99e-17!5;CL:0000412!6.99e-17!5;CL:0000182!6.99e-17!5;CL:0000414!9.31e-08!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.59e-35,5;CL:0000223,3.63e-09,20;CL:0000066,2.10e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.45e-37!22;UBERON:0007499!7.45e-37!22;UBERON:0006925!7.45e-37!22;UBERON:0009497!7.45e-37!22;UBERON:0000015!7.45e-37!22;UBERON:0002423!7.45e-37!22;UBERON:0006235!7.45e-37!22;UBERON:0008835!7.45e-37!22;UBERON:0003894!7.45e-37!22;UBERON:0004161!7.45e-37!22;UBERON:0008836!7.45e-37!22;UBERON:0009854!3.56e-35!23;UBERON:0009856!3.56e-35!23;UBERON:0002365!3.22e-32!25;UBERON:0002330!3.22e-32!25;UBERON:0003914!2.88e-16!47;UBERON:0005256!2.88e-16!47;UBERON:0003929!7.08e-16!55;UBERON:0005172!1.59e-15!49;UBERON:0005173!1.59e-15!49;UBERON:0002417!1.59e-15!49;UBERON:0000916!1.59e-15!49;UBERON:0005057!7.71e-15!51;UBERON:0000490!6.97e-13!66;UBERON:0002368!2.55e-12!60;UBERON:0005911!3.13e-12!69;UBERON:0002530!3.21e-11!65;UBERON:0009569!5.09e-11!66;UBERON:0000466!2.10e-10!79;UBERON:0002405!2.83e-10!70;UBERON:0000949!6.20e-10!72;UBERON:0001041!1.28e-08!92;UBERON:0005177!4.19e-08!85;UBERON:0000077!4.60e-08!97;UBERON:0002100!9.35e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.90e-24,22;UBERON:0007499,1.90e-24,22;UBERON:0006925,1.90e-24,22;UBERON:0009497,1.90e-24,22;UBERON:0000015,1.90e-24,22;UBERON:0002423,1.90e-24,22;UBERON:0006235,1.90e-24,22;UBERON:0008835,1.90e-24,22;UBERON:0003894,1.90e-24,22;UBERON:0004161,1.90e-24,22;UBERON:0008836,1.90e-24,22;UBERON:0009854,2.17e-23,23;UBERON:0009856,2.17e-23,23;UBERON:0002365,1.57e-21,25;UBERON:0002330,1.57e-21,25;UBERON:0005256,5.49e-12,45;UBERON:0003914,1.78e-11,47;UBERON:0005172,5.25e-11,49;UBERON:0005173,5.25e-11,49;UBERON:0002417,5.25e-11,49;UBERON:0000916,5.25e-11,49;UBERON:0003929,8.45e-10,55;UBERON:0002368,5.62e-09,60;UBERON:0003104,7.92e-09,61;UBERON:0009142,7.92e-09,61;UBERON:0002530,2.81e-08,65;UBERON:0000490,3.76e-08,66;UBERON:0009569,3.76e-08,66;UBERON:0005911,8.62e-08,69;UBERON:0000949,1.85e-07,72;UBERON:0005177,8.74e-07,79 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,2.03991400112325,4.31762553310254,1.29955283489534,1.34408066129201,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0,0,0,0,0,0,0,4.86405680325106,0.274561413188081,1.43768206527355,0,0.312037673114561,0.252578877947112,0.896987067609561,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:112522789..112522794,+ | |||
}} |
Revision as of 14:44, 14 September 2013
Short description: | p@chr8:112522789..112522794, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:112522789..112522794, + |
Coexpression cluster: | MCL_coexpression_mm9:111 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.59e-35 | 5 |
endodermal cell | 3.63e-09 | 20 |
epithelial cell | 2.10e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
liver | 1.90e-24 | 22 |
epithelial sac | 1.90e-24 | 22 |
digestive gland | 1.90e-24 | 22 |
epithelium of foregut-midgut junction | 1.90e-24 | 22 |
anatomical boundary | 1.90e-24 | 22 |
hepatobiliary system | 1.90e-24 | 22 |
foregut-midgut junction | 1.90e-24 | 22 |
hepatic diverticulum | 1.90e-24 | 22 |
liver primordium | 1.90e-24 | 22 |
septum transversum | 1.90e-24 | 22 |
liver bud | 1.90e-24 | 22 |
digestive tract diverticulum | 2.17e-23 | 23 |
sac | 2.17e-23 | 23 |
exocrine gland | 1.57e-21 | 25 |
exocrine system | 1.57e-21 | 25 |
trunk mesenchyme | 5.49e-12 | 45 |
epithelial tube | 1.78e-11 | 47 |
abdomen element | 5.25e-11 | 49 |
abdominal segment element | 5.25e-11 | 49 |
abdominal segment of trunk | 5.25e-11 | 49 |
abdomen | 5.25e-11 | 49 |
gut epithelium | 8.45e-10 | 55 |
endocrine gland | 5.62e-09 | 60 |
mesenchyme | 7.92e-09 | 61 |
entire embryonic mesenchyme | 7.92e-09 | 61 |
gland | 2.81e-08 | 65 |
unilaminar epithelium | 3.76e-08 | 66 |
subdivision of trunk | 3.76e-08 | 66 |
endo-epithelium | 8.62e-08 | 69 |
endocrine system | 1.85e-07 | 72 |
trunk region element | 8.74e-07 | 79 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.