FFCP PHASE1:Mm9::chr10:126529723..126529744,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:126529723..126529744,+|id=chr10:126529723..126529744,+|ontology_enrichment_celltype=CL:0000117!7.49e-16!23;CL:0000337!7.49e-16!23;CL:0000540!1.61e-08!33;CL:0000047!1.61e-08!33;CL:0000031!1.61e-08!33;CL:0000404!1.61e-08!33;CL:0000393!8.72e-07!39;CL:0000211!8.72e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,5.96e-28,23;CL:0000337,5.96e-28,23;CL:0000540,5.24e-18,33;CL:0000047,5.24e-18,33;CL:0000031,5.24e-18,33;CL:0000404,5.24e-18,33;CL:0000393,1.67e-14,39;CL:0000211,1.67e-14,39;CL:0002319,1.02e-12,43;CL:0000221,2.54e-12,44;CL:0000133,2.54e-12,44;CL:0002614,3.51e-07,3;CL:0002610,5.90e-07,3;CL:0002612,7.12e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.84e-23!52;UBERON:0005068!5.84e-23!52;UBERON:0006241!5.84e-23!52;UBERON:0007135!5.84e-23!52;UBERON:0000955!3.14e-22!50;UBERON:0006238!3.14e-22!50;UBERON:0002616!2.22e-21!49;UBERON:0001017!7.90e-21!73;UBERON:0005743!7.90e-21!73;UBERON:0002020!8.32e-21!34;UBERON:0000073!3.94e-20!75;UBERON:0001016!3.94e-20!75;UBERON:0007811!4.74e-20!86;UBERON:0003080!8.35e-19!40;UBERON:0002780!3.56e-18!39;UBERON:0001890!3.56e-18!39;UBERON:0006240!3.56e-18!39;UBERON:0000153!2.28e-17!94;UBERON:0002791!4.58e-17!29;UBERON:0003528!4.58e-17!29;UBERON:0001893!4.58e-17!29;UBERON:0000033!5.29e-16!63;UBERON:0003056!4.68e-15!49;UBERON:0002346!1.22e-14!71;UBERON:0003075!1.22e-14!71;UBERON:0007284!1.22e-14!71;UBERON:0000956!1.15e-11!21;UBERON:0001869!1.15e-11!21;UBERON:0000203!1.15e-11!21;UBERON:0004121!3.70e-11!102;UBERON:0000924!3.70e-11!102;UBERON:0006601!3.70e-11!102;UBERON:0002619!1.41e-09!17;UBERON:0002021!3.68e-09!10;UBERON:0000411!3.68e-09!10;UBERON:0001950!3.68e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.62e-46,54;UBERON:0002020,2.12e-43,34;UBERON:0001017,1.38e-40,73;UBERON:0001049,1.70e-39,52;UBERON:0005068,1.70e-39,52;UBERON:0006241,1.70e-39,52;UBERON:0007135,1.70e-39,52;UBERON:0001016,2.87e-39,75;UBERON:0003528,7.67e-34,29;UBERON:0002791,7.67e-34,29;UBERON:0001893,7.67e-34,29;UBERON:0000955,1.57e-33,47;UBERON:0006238,1.57e-33,47;UBERON:0003080,2.97e-32,40;UBERON:0002616,1.30e-31,46;UBERON:0002780,9.90e-31,39;UBERON:0001890,9.90e-31,39;UBERON:0006240,9.90e-31,39;UBERON:0002346,1.47e-30,64;UBERON:0003075,1.47e-30,64;UBERON:0007284,1.47e-30,64;UBERON:0004121,4.01e-29,95;UBERON:0000924,4.01e-29,95;UBERON:0006601,4.01e-29,95;UBERON:0010371,8.77e-26,73;UBERON:0003056,4.63e-25,49;UBERON:0002021,1.29e-21,10;UBERON:0000411,1.29e-21,10;UBERON:0001950,1.29e-21,10;UBERON:0000956,2.97e-20,21;UBERON:0001869,2.97e-20,21;UBERON:0000203,2.97e-20,21;UBERON:0002619,9.96e-20,17;UBERON:0010314,8.99e-19,92;UBERON:0002420,3.87e-15,8;UBERON:0007245,3.87e-15,8;UBERON:0010009,3.87e-15,8;UBERON:0010011,3.87e-15,8;UBERON:0000454,3.87e-15,8;UBERON:0000025,1.40e-13,114;UBERON:0004111,3.68e-12,122;UBERON:0001948,1.00e-10,5;UBERON:0002315,1.00e-10,5;UBERON:0011216,2.19e-10,194;UBERON:0000369,1.46e-09,5;UBERON:0002435,1.46e-09,5;UBERON:0000204,1.46e-09,5;UBERON:0010082,1.46e-09,5;UBERON:0002240,7.30e-09,6;UBERON:0005174,7.30e-09,6;UBERON:0001137,7.30e-09,6;UBERON:0002950,1.14e-08,4;UBERON:0001891,1.14e-08,4;UBERON:0009616,1.14e-08,4;UBERON:0010286,1.14e-08,4;UBERON:0003076,1.62e-07,12;UBERON:0003057,1.62e-07,12;UBERON:0002038,3.51e-07,3;UBERON:0009663,3.51e-07,3;UBERON:0009661,3.51e-07,3;UBERON:0000125,3.51e-07,3;UBERON:0002308,3.51e-07,3;UBERON:0004684,5.90e-07,3;UBERON:0002275,5.90e-07,3;UBERON:0002257,7.12e-07,3;UBERON:0000483,9.29e-07,174|phase1_expression=0,0,0,0,0,0,0,1.03298658753261,0.140788722151667,0.234064526321993,0,0.319088635981346,0.684802919724823,0.611942816932982,0,0,0,0.157731082679119,0.411343300817216,0.84877930359606,1.02051948181284,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0,0.251793635951155,0,0.183546752161682,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,1.21389876515759,4.23192783417626,2.53532561402472,0.677689064138264,0,0,0,0,0.299600110518405,0.768436610643109,0.725827286159344,2.02508907497536,0.630974884054146,5.42736870367227,4.19650227808066,0.489963196859816,0.958454710182364,2.75765635983006,4.40463523997555,3.44755812830007,2.76491759861238,1.58263545276233,1.37231465403614,2.6045668527838,1.95428099300967,6.75315132038016,5.19514042441154,3.24091444021034,4.55589378557129,2.42319279572891,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,1.46390398505774,1.8850203613211,0,0.479260498023681,0,0.381210681219194,1.79748767285787,4.11750542536764,2.1361239859187,1.56441888173049,3.58001640262463,4.36354893575076,2.10913641988085,0,0.124406970610093,0.252722758433675,0,0,0,0,0.150704817835715,0.0680364991513279,0.2562274405697,0.281105173679186,0,0,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0.162137619091711,0.146199987425332,0,0.134206418760372,6.72927835405207,1.23485534855141,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.586058432961016,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,7.71171159412337,0,0.534196811001766,0,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,1.02131881726136,0.36012218806262,0.388076051348264,0,0,0.178368817602071,0.329098041204242,0.608929898229199,0,0,0,0,0,0,0,0,0,0.18542530201051,0.170870880797853,0,0,0.565105371014073,0.136694227721025,0,0.679913719975421,0.419854356970974,0.552799895217695,0,0,0,0,0,0,0.674321731924103,0,0,0.129614973291793,0,0,0.149516546043979,0,0.388902376688095,0.129159823477731,0,0.117357238645754,0.2604087696879,0,0,0,0.316011120628178,0.608175645870493,0.308132871494482,0.51968329191118,0,0.39736270956253,1.08175904567972,0.590758108698309,0.908698049533329,0.304827226619999,0.604957110821043,0.682205165178267,0.577271049841977,0.701261413089414,0,0,0,0,0,0.187682475451182,0,0,0,4.51801474093653,7.36520378411483,3.43737308063638,10.8267504876523,6.16574267793578,6.7985450765073,5.40018000185445,8.10578165803597,3.17199686288943,4.65984280576638,0.103787347584177,0,0.682934423016537,0.243106717068294,0,0.183843508450014,0,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.256100609619477,0.0574354689556133,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0.685738504770831,0.532427418478012,0.238436189947321,0.436039249896986,0.188218760830661,0.423073039458382,0.182927972872773,0.526139422875686,0.135804113845862,0.561142271657738,0.118635018124174,0.197008964751127,0.818462086339379,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0.231867835620421|short_description=p@chr10:126529723..126529744,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:126529723..126529744,+ | |||
|id=chr10:126529723..126529744,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.49e-16!23;CL:0000337!7.49e-16!23;CL:0000540!1.61e-08!33;CL:0000047!1.61e-08!33;CL:0000031!1.61e-08!33;CL:0000404!1.61e-08!33;CL:0000393!8.72e-07!39;CL:0000211!8.72e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.96e-28,23;CL:0000337,5.96e-28,23;CL:0000540,5.24e-18,33;CL:0000047,5.24e-18,33;CL:0000031,5.24e-18,33;CL:0000404,5.24e-18,33;CL:0000393,1.67e-14,39;CL:0000211,1.67e-14,39;CL:0002319,1.02e-12,43;CL:0000221,2.54e-12,44;CL:0000133,2.54e-12,44;CL:0002614,3.51e-07,3;CL:0002610,5.90e-07,3;CL:0002612,7.12e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.84e-23!52;UBERON:0005068!5.84e-23!52;UBERON:0006241!5.84e-23!52;UBERON:0007135!5.84e-23!52;UBERON:0000955!3.14e-22!50;UBERON:0006238!3.14e-22!50;UBERON:0002616!2.22e-21!49;UBERON:0001017!7.90e-21!73;UBERON:0005743!7.90e-21!73;UBERON:0002020!8.32e-21!34;UBERON:0000073!3.94e-20!75;UBERON:0001016!3.94e-20!75;UBERON:0007811!4.74e-20!86;UBERON:0003080!8.35e-19!40;UBERON:0002780!3.56e-18!39;UBERON:0001890!3.56e-18!39;UBERON:0006240!3.56e-18!39;UBERON:0000153!2.28e-17!94;UBERON:0002791!4.58e-17!29;UBERON:0003528!4.58e-17!29;UBERON:0001893!4.58e-17!29;UBERON:0000033!5.29e-16!63;UBERON:0003056!4.68e-15!49;UBERON:0002346!1.22e-14!71;UBERON:0003075!1.22e-14!71;UBERON:0007284!1.22e-14!71;UBERON:0000956!1.15e-11!21;UBERON:0001869!1.15e-11!21;UBERON:0000203!1.15e-11!21;UBERON:0004121!3.70e-11!102;UBERON:0000924!3.70e-11!102;UBERON:0006601!3.70e-11!102;UBERON:0002619!1.41e-09!17;UBERON:0002021!3.68e-09!10;UBERON:0000411!3.68e-09!10;UBERON:0001950!3.68e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.62e-46,54;UBERON:0002020,2.12e-43,34;UBERON:0001017,1.38e-40,73;UBERON:0001049,1.70e-39,52;UBERON:0005068,1.70e-39,52;UBERON:0006241,1.70e-39,52;UBERON:0007135,1.70e-39,52;UBERON:0001016,2.87e-39,75;UBERON:0003528,7.67e-34,29;UBERON:0002791,7.67e-34,29;UBERON:0001893,7.67e-34,29;UBERON:0000955,1.57e-33,47;UBERON:0006238,1.57e-33,47;UBERON:0003080,2.97e-32,40;UBERON:0002616,1.30e-31,46;UBERON:0002780,9.90e-31,39;UBERON:0001890,9.90e-31,39;UBERON:0006240,9.90e-31,39;UBERON:0002346,1.47e-30,64;UBERON:0003075,1.47e-30,64;UBERON:0007284,1.47e-30,64;UBERON:0004121,4.01e-29,95;UBERON:0000924,4.01e-29,95;UBERON:0006601,4.01e-29,95;UBERON:0010371,8.77e-26,73;UBERON:0003056,4.63e-25,49;UBERON:0002021,1.29e-21,10;UBERON:0000411,1.29e-21,10;UBERON:0001950,1.29e-21,10;UBERON:0000956,2.97e-20,21;UBERON:0001869,2.97e-20,21;UBERON:0000203,2.97e-20,21;UBERON:0002619,9.96e-20,17;UBERON:0010314,8.99e-19,92;UBERON:0002420,3.87e-15,8;UBERON:0007245,3.87e-15,8;UBERON:0010009,3.87e-15,8;UBERON:0010011,3.87e-15,8;UBERON:0000454,3.87e-15,8;UBERON:0000025,1.40e-13,114;UBERON:0004111,3.68e-12,122;UBERON:0001948,1.00e-10,5;UBERON:0002315,1.00e-10,5;UBERON:0011216,2.19e-10,194;UBERON:0000369,1.46e-09,5;UBERON:0002435,1.46e-09,5;UBERON:0000204,1.46e-09,5;UBERON:0010082,1.46e-09,5;UBERON:0002240,7.30e-09,6;UBERON:0005174,7.30e-09,6;UBERON:0001137,7.30e-09,6;UBERON:0002950,1.14e-08,4;UBERON:0001891,1.14e-08,4;UBERON:0009616,1.14e-08,4;UBERON:0010286,1.14e-08,4;UBERON:0003076,1.62e-07,12;UBERON:0003057,1.62e-07,12;UBERON:0002038,3.51e-07,3;UBERON:0009663,3.51e-07,3;UBERON:0009661,3.51e-07,3;UBERON:0000125,3.51e-07,3;UBERON:0002308,3.51e-07,3;UBERON:0004684,5.90e-07,3;UBERON:0002275,5.90e-07,3;UBERON:0002257,7.12e-07,3;UBERON:0000483,9.29e-07,174 | |||
|phase1_expression=0,0,0,0,0,0,0,1.03298658753261,0.140788722151667,0.234064526321993,0,0.319088635981346,0.684802919724823,0.611942816932982,0,0,0,0.157731082679119,0.411343300817216,0.84877930359606,1.02051948181284,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0,0.251793635951155,0,0.183546752161682,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,1.21389876515759,4.23192783417626,2.53532561402472,0.677689064138264,0,0,0,0,0.299600110518405,0.768436610643109,0.725827286159344,2.02508907497536,0.630974884054146,5.42736870367227,4.19650227808066,0.489963196859816,0.958454710182364,2.75765635983006,4.40463523997555,3.44755812830007,2.76491759861238,1.58263545276233,1.37231465403614,2.6045668527838,1.95428099300967,6.75315132038016,5.19514042441154,3.24091444021034,4.55589378557129,2.42319279572891,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,1.46390398505774,1.8850203613211,0,0.479260498023681,0,0.381210681219194,1.79748767285787,4.11750542536764,2.1361239859187,1.56441888173049,3.58001640262463,4.36354893575076,2.10913641988085,0,0.124406970610093,0.252722758433675,0,0,0,0,0.150704817835715,0.0680364991513279,0.2562274405697,0.281105173679186,0,0,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0.162137619091711,0.146199987425332,0,0.134206418760372,6.72927835405207,1.23485534855141,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.586058432961016,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,7.71171159412337,0,0.534196811001766,0,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,1.02131881726136,0.36012218806262,0.388076051348264,0,0,0.178368817602071,0.329098041204242,0.608929898229199,0,0,0,0,0,0,0,0,0,0.18542530201051,0.170870880797853,0,0,0.565105371014073,0.136694227721025,0,0.679913719975421,0.419854356970974,0.552799895217695,0,0,0,0,0,0,0.674321731924103,0,0,0.129614973291793,0,0,0.149516546043979,0,0.388902376688095,0.129159823477731,0,0.117357238645754,0.2604087696879,0,0,0,0.316011120628178,0.608175645870493,0.308132871494482,0.51968329191118,0,0.39736270956253,1.08175904567972,0.590758108698309,0.908698049533329,0.304827226619999,0.604957110821043,0.682205165178267,0.577271049841977,0.701261413089414,0,0,0,0,0,0.187682475451182,0,0,0,4.51801474093653,7.36520378411483,3.43737308063638,10.8267504876523,6.16574267793578,6.7985450765073,5.40018000185445,8.10578165803597,3.17199686288943,4.65984280576638,0.103787347584177,0,0.682934423016537,0.243106717068294,0,0.183843508450014,0,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.256100609619477,0.0574354689556133,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0.685738504770831,0.532427418478012,0.238436189947321,0.436039249896986,0.188218760830661,0.423073039458382,0.182927972872773,0.526139422875686,0.135804113845862,0.561142271657738,0.118635018124174,0.197008964751127,0.818462086339379,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr10:126529723..126529744,+ | |||
}} |
Revision as of 15:59, 12 September 2013
Short description: | p@chr10:126529723..126529744, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:126529723..126529744, + |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.96e-28 | 23 |
neuroblast (sensu Vertebrata) | 5.96e-28 | 23 |
neuron | 5.24e-18 | 33 |
neuronal stem cell | 5.24e-18 | 33 |
neuroblast | 5.24e-18 | 33 |
electrically signaling cell | 5.24e-18 | 33 |
electrically responsive cell | 1.67e-14 | 39 |
electrically active cell | 1.67e-14 | 39 |
neural cell | 1.02e-12 | 43 |
ectodermal cell | 2.54e-12 | 44 |
neurectodermal cell | 2.54e-12 | 44 |
neuron of the substantia nigra | 3.51e-07 | 3 |
raphe nuclei neuron | 5.90e-07 | 3 |
neuron of the ventral spinal cord | 7.12e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.