FFCP PHASE1:Mm9::chr1:122498982..122498991,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13798|HGNC=|MCL_coexpression_id=224|UniProt=P09065|association_with_transcript=-3bp_to_ENSMUST00000079721_5end|description=CAGE_peak_3_at_En1_5end|id=chr1:122498982..122498991,+|ontology_enrichment_celltype=CL:0000120!4.28e-07!3;CL:0002614!9.25e-07!3|ontology_enrichment_celltype_v019_2=CL:0000120,1.33e-65,3;CL:0000117,1.91e-09,23;CL:0000337,1.91e-09,23;CL:0000540,7.84e-07,33;CL:0000047,7.84e-07,33;CL:0000031,7.84e-07,33;CL:0000404,7.84e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002950!2.33e-08!4;UBERON:0001891!2.33e-08!4;UBERON:0009616!2.33e-08!4;UBERON:0002102!5.80e-08!8;UBERON:0004710!5.80e-08!8;UBERON:0005419!5.80e-08!8;UBERON:0005417!5.80e-08!8;UBERON:0005729!5.80e-08!8;UBERON:0002298!9.94e-08!6;UBERON:0000026!1.29e-07!13;UBERON:0004708!1.29e-07!13;UBERON:0002101!1.29e-07!13;UBERON:0004357!1.29e-07!13;UBERON:0009872!1.29e-07!13;UBERON:0004347!1.29e-07!13;UBERON:0005732!1.29e-07!13;UBERON:0005733!1.29e-07!13;UBERON:0003102!5.73e-07!23;UBERON:0002038!9.25e-07!3;UBERON:0002308!9.25e-07!3;UBERON:0009663!9.25e-07!3;UBERON:0009661!9.25e-07!3;UBERON:0006331!9.25e-07!3;UBERON:0000125!9.25e-07!3|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.550640256485045,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,2.11596391708813,2.53532561402472,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0.768032666281217,0.263772575460388,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.763991238884051,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,0.449371918214468,0,0,0,0,0.20778804455956,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0.431135985865684,0.378212160335639,0,0.219195732427575,0.556094498451196,1.0447564995665,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0.491804836130026,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0.301564624640779,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0.367687016900028,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0.192909220463705,0,0.294397840268795,0,0,0,0,0,0.0846146078916765,0.548783918618318,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0|short_description=p3@En1}} | ||
|EntrezGene=13798 | |||
|HGNC= | |||
|MCL_coexpression_id=224 | |||
|UniProt=P09065 | |||
|association_with_transcript=-3bp_to_ENSMUST00000079721_5end | |||
|description=CAGE_peak_3_at_En1_5end | |||
|id=chr1:122498982..122498991,+ | |||
|ontology_enrichment_celltype=CL:0000120!4.28e-07!3;CL:0002614!9.25e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,1.33e-65,3;CL:0000117,1.91e-09,23;CL:0000337,1.91e-09,23;CL:0000540,7.84e-07,33;CL:0000047,7.84e-07,33;CL:0000031,7.84e-07,33;CL:0000404,7.84e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002950!2.33e-08!4;UBERON:0001891!2.33e-08!4;UBERON:0009616!2.33e-08!4;UBERON:0002102!5.80e-08!8;UBERON:0004710!5.80e-08!8;UBERON:0005419!5.80e-08!8;UBERON:0005417!5.80e-08!8;UBERON:0005729!5.80e-08!8;UBERON:0002298!9.94e-08!6;UBERON:0000026!1.29e-07!13;UBERON:0004708!1.29e-07!13;UBERON:0002101!1.29e-07!13;UBERON:0004357!1.29e-07!13;UBERON:0009872!1.29e-07!13;UBERON:0004347!1.29e-07!13;UBERON:0005732!1.29e-07!13;UBERON:0005733!1.29e-07!13;UBERON:0003102!5.73e-07!23;UBERON:0002038!9.25e-07!3;UBERON:0002308!9.25e-07!3;UBERON:0009663!9.25e-07!3;UBERON:0009661!9.25e-07!3;UBERON:0006331!9.25e-07!3;UBERON:0000125!9.25e-07!3 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.550640256485045,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,2.11596391708813,2.53532561402472,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0.768032666281217,0.263772575460388,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.763991238884051,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,0.449371918214468,0,0,0,0,0.20778804455956,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0.431135985865684,0.378212160335639,0,0.219195732427575,0.556094498451196,1.0447564995665,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0.491804836130026,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0.301564624640779,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0.367687016900028,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0.192909220463705,0,0.294397840268795,0,0,0,0,0,0.0846146078916765,0.548783918618318,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p3@En1 | |||
}} |
Revision as of 18:36, 13 September 2013
Short description: | p3@En1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_En1_5end |
Coexpression cluster: | MCL_coexpression_mm9:224 |
Association with transcript: | -3bp_to_ENSMUST00000079721_5end |
EntrezGene: | En1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 1.33e-65 | 3 |
CNS neuron (sensu Vertebrata) | 1.91e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.91e-09 | 23 |
neuron | 7.84e-07 | 33 |
neuronal stem cell | 7.84e-07 | 33 |
neuroblast | 7.84e-07 | 33 |
electrically signaling cell | 7.84e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.