FFCP PHASE1:Mm9::chr17:39985193..39985213,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=255|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:39985193..39985213,+|id=chr17:39985193..39985213,+|ontology_enrichment_celltype=CL:0000219!1.19e-11!54;CL:0002320!7.95e-09!46;CL:0000134!7.95e-09!46;CL:0000548!1.79e-08!115;CL:0000004!1.79e-08!115;CL:0000255!1.79e-08!115;CL:0002371!4.44e-07!118|ontology_enrichment_celltype_v019_2=CL:0000219,5.70e-12,54;CL:0002320,4.11e-09,46;CL:0000134,4.11e-09,46;CL:0002031,9.78e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!7.95e-09!46;UBERON:0000949!1.24e-07!72|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.11e-09,46;UBERON:0000949,1.10e-07,72|phase1_expression=0.320297694209588,0.348975407639361,0.454999239389536,3.62957053568196,5.00895729946347,0.33575854382378,3.50418960893289,5.93967287831251,4.08287294239834,4.68129052643987,5.13653904676515,8.93448180747768,2.56801094896809,2.88487327982691,25.649451659806,17.2103977281352,10.4934281719222,3.62781490161973,3.15363197293199,8.91218268775863,1.61582251287033,8.24114894967348,2.35079810225042,3.35984087866154,4.12936705920906,0,0,0.430942465371778,2.66032787238923,0,0.886922042621219,235.596379853523,87.339199837009,475.445043046316,1.44425809875637,0.664938581433969,1.22501613757421,0,0,0,0,0,0.485510353031154,5.28766635497425,5.06884656097573,5.50640256485045,41.4667412504461,4.57852828398938,9.66619204031676,2.52758868796568,17.9182619680464,15.8127820801469,2.18117387875057,11.6057942721815,9.41062637598899,17.4936416504444,10.3152038377952,6.70373719960675,2.02316460859598,2.64495489636016,0.633831403506179,56.2481923234759,34.6824970483344,8.54904731417329,27.6882581518753,26.9982443679518,23.9680088414724,16.1371688235053,2.48855069540346,3.78016627328734,3.36519938162211,2.85650984403804,1.76694832761291,1.5923803897944,1.43768206527355,3.67687514644008,6.60695285996332,1.27687338085188,1.0752457327937,2.50583946687368,1.55528994124096,3.64639359389732,1.11673199600552,1.68828783009504,2.13917546887534,5.00868595305235,2.13557521198654,2.23679334990361,14.0850719599722,10.0510174942025,3.18850937571846,11.185510400758,10.1995700056163,10.2543606411185,14.9448576012964,6.72040330646003,1.54488862144927,6.13549161281008,12.7295142255406,7.42013106471715,0.704217098883403,2.56652954828636,2.54805239706646,7.11066703153331,9.74209684550464,8.61423542615335,5.05524445014783,1.82694207550496,0.258937883647172,1.03909497345377,9.71517829890361,10.3518262626128,4.61230994512117,4.22023393547343,2.4693628498498,2.13633205260448,1.23597483867187,0.144599356919912,3.5384422077995,3.88240439873782,1.54589062922275,4.363877278217,5.59175283654366,0.878342391034642,0.628340120440365,5.10914110417183,0.599075622529601,0,0.635351135365324,1.3481157546434,0.915001205637253,0.879580464790051,0.695297280769106,0.767146371990992,2.49345653471472,2.92034273521964,4.3790926455636,2.11491850037158,1.51633655060205,1.26265113531884,5.33493816147085,3.67843367093557,3.42118046630164,1.9591626318643,0.95251098811859,0.896796041993948,0.749613796477831,1.29351685369508,4.74249584452253,3.40390944302075,3.16712023495108,5.69908904311695,7.50727572909114,2.43776516565517,1.02891068203972,4.97585667046233,0,0,7.10408748488982,3.10688658803253,7.03578179943289,3.78130329068131,4.7348947117042,1.77087808572663,2.31400669331067,3.0229412817553,1.60964040839772,0.934122738937356,2.13927804887525,0.985004784474571,0.810688095458557,1.02339991197733,1.3173006917463,1.74468344388483,0.841159794256509,1.44066457330998,2.31293148088659,7.93351699990633,5.33220626338085,7.66381017139447,2.44848176511977,2.8235693447268,1.77902435075896,1.52180500890047,33.2170343081158,3.78807595865225,3.01602250560323,1.79060824837036,1.55971269695296,17.9763881730844,2.59365659849633,1.39398891278057,5.12103332573321,5.71242563048644,3.38123207019241,3.66572390121566,3.87904974335251,2.10407459670956,0.948548056863859,0.738050739898011,1.09899109488962,1.35736880313981,3.55743152504579,4.33797274861845,4.91397487783007,5.39669069723649,6.6943840058206,5.06472035480075,6.11102044275408,5.17853047411459,5.99900339067631,9.33508804839477,60.3826467414889,4.46569137202204,1.87222603868736,2.02063102357689,1.4351793081753,2.8946611281802,1.84753190166605,8.90609635321278,3.25929952884052,6.45031325945715,3.28566347603903,2.01007508930179,1.6663054862021,1.56106918286239,1.26108115284953,1.10732344824387,0.478364305972461,0.327726629431476,1.20879487306127,1.15719246865209,3.01582567878545,4.35124547054968,5.4094070032094,3.03530420935206,1.60550589987792,0.586058432961016,0.655739781506702,2.01976741763498,8.20321370482267,7.80877488593277,7.75524231838076,6.69112634267146,6.68396022247182,5.37845408498782,8.09621403349789,9.35218745316198,5.53402889125133,0.321321316421807,1.56134093729095,4.80777129901589,4.88660878060728,1.48473110675282,5.30980553359851,20.1507928008635,5.74414758233027,5.28094223316515,5.61073596473468,7.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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=255 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:39985193..39985213,+ | |||
|id=chr17:39985193..39985213,+ | |||
|ontology_enrichment_celltype=CL:0000219!1.19e-11!54;CL:0002320!7.95e-09!46;CL:0000134!7.95e-09!46;CL:0000548!1.79e-08!115;CL:0000004!1.79e-08!115;CL:0000255!1.79e-08!115;CL:0002371!4.44e-07!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,5.70e-12,54;CL:0002320,4.11e-09,46;CL:0000134,4.11e-09,46;CL:0002031,9.78e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.95e-09!46;UBERON:0000949!1.24e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.11e-09,46;UBERON:0000949,1.10e-07,72 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0.454999239389536,3.62957053568196,5.00895729946347,0.33575854382378,3.50418960893289,5.93967287831251,4.08287294239834,4.68129052643987,5.13653904676515,8.93448180747768,2.56801094896809,2.88487327982691,25.649451659806,17.2103977281352,10.4934281719222,3.62781490161973,3.15363197293199,8.91218268775863,1.61582251287033,8.24114894967348,2.35079810225042,3.35984087866154,4.12936705920906,0,0,0.430942465371778,2.66032787238923,0,0.886922042621219,235.596379853523,87.339199837009,475.445043046316,1.44425809875637,0.664938581433969,1.22501613757421,0,0,0,0,0,0.485510353031154,5.28766635497425,5.06884656097573,5.50640256485045,41.4667412504461,4.57852828398938,9.66619204031676,2.52758868796568,17.9182619680464,15.8127820801469,2.18117387875057,11.6057942721815,9.41062637598899,17.4936416504444,10.3152038377952,6.70373719960675,2.02316460859598,2.64495489636016,0.633831403506179,56.2481923234759,34.6824970483344,8.54904731417329,27.6882581518753,26.9982443679518,23.9680088414724,16.1371688235053,2.48855069540346,3.78016627328734,3.36519938162211,2.85650984403804,1.76694832761291,1.5923803897944,1.43768206527355,3.67687514644008,6.60695285996332,1.27687338085188,1.0752457327937,2.50583946687368,1.55528994124096,3.64639359389732,1.11673199600552,1.68828783009504,2.13917546887534,5.00868595305235,2.13557521198654,2.23679334990361,14.0850719599722,10.0510174942025,3.18850937571846,11.185510400758,10.1995700056163,10.2543606411185,14.9448576012964,6.72040330646003,1.54488862144927,6.13549161281008,12.7295142255406,7.42013106471715,0.704217098883403,2.56652954828636,2.54805239706646,7.11066703153331,9.74209684550464,8.61423542615335,5.05524445014783,1.82694207550496,0.258937883647172,1.03909497345377,9.71517829890361,10.3518262626128,4.61230994512117,4.22023393547343,2.4693628498498,2.13633205260448,1.23597483867187,0.144599356919912,3.5384422077995,3.88240439873782,1.54589062922275,4.363877278217,5.59175283654366,0.878342391034642,0.628340120440365,5.10914110417183,0.599075622529601,0,0.635351135365324,1.3481157546434,0.915001205637253,0.879580464790051,0.695297280769106,0.767146371990992,2.49345653471472,2.92034273521964,4.3790926455636,2.11491850037158,1.51633655060205,1.26265113531884,5.33493816147085,3.67843367093557,3.42118046630164,1.9591626318643,0.95251098811859,0.896796041993948,0.749613796477831,1.29351685369508,4.74249584452253,3.40390944302075,3.16712023495108,5.69908904311695,7.50727572909114,2.43776516565517,1.02891068203972,4.97585667046233,0,0,7.10408748488982,3.10688658803253,7.03578179943289,3.78130329068131,4.7348947117042,1.77087808572663,2.31400669331067,3.0229412817553,1.60964040839772,0.934122738937356,2.13927804887525,0.985004784474571,0.810688095458557,1.02339991197733,1.3173006917463,1.74468344388483,0.841159794256509,1.44066457330998,2.31293148088659,7.93351699990633,5.33220626338085,7.66381017139447,2.44848176511977,2.8235693447268,1.77902435075896,1.52180500890047,33.2170343081158,3.78807595865225,3.01602250560323,1.79060824837036,1.55971269695296,17.9763881730844,2.59365659849633,1.39398891278057,5.12103332573321,5.71242563048644,3.38123207019241,3.66572390121566,3.87904974335251,2.10407459670956,0.948548056863859,0.738050739898011,1.09899109488962,1.35736880313981,3.55743152504579,4.33797274861845,4.91397487783007,5.39669069723649,6.6943840058206,5.06472035480075,6.11102044275408,5.17853047411459,5.99900339067631,9.33508804839477,60.3826467414889,4.46569137202204,1.87222603868736,2.02063102357689,1.4351793081753,2.8946611281802,1.84753190166605,8.90609635321278,3.25929952884052,6.45031325945715,3.28566347603903,2.01007508930179,1.6663054862021,1.56106918286239,1.26108115284953,1.10732344824387,0.478364305972461,0.327726629431476,1.20879487306127,1.15719246865209,3.01582567878545,4.35124547054968,5.4094070032094,3.03530420935206,1.60550589987792,0.586058432961016,0.655739781506702,2.01976741763498,8.20321370482267,7.80877488593277,7.75524231838076,6.69112634267146,6.68396022247182,5.37845408498782,8.09621403349789,9.35218745316198,5.53402889125133,0.321321316421807,1.56134093729095,4.80777129901589,4.88660878060728,1.48473110675282,5.30980553359851,20.1507928008635,5.74414758233027,5.28094223316515,5.61073596473468,7.07100840271033,5.94385074286909,8.72480950746013,9.26893183800275,4.10847785316561,4.21674434299995,3.09406629744561,0.340439605753788,6.48219938512717,6.98536892426874,8.57348140126369,6.0295679438373,4.63758925765383,4.44282355625727,11.5696680663548,5.16277757740163,1.90648863777438,1.7642271844397,0.49465875882444,2.58343082713449,1.20625849856312,2.626191568069,4.10352249362653,13.699599321603,0.556275906031529,4.10090113914846,2.06386867963222,4.8150577116125,3.01389531207506,2.32380187125743,4.34678529092393,0.679913719975421,0.279902904647316,0.829199842826543,0.954670618015114,4.27053591334533,3.04979200690273,4.21220829205025,4.80903080833278,2.62035076495413,4.04593039154462,0.991841468704031,4.18809507174447,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| |||
|short_description=p@chr17:39985193..39985213,+ | |||
}} |
Revision as of 14:31, 13 September 2013
Short description: | p@chr17:39985193..39985213, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:39985193..39985213, + |
Coexpression cluster: | MCL_coexpression_mm9:255 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 5.70e-12 | 54 |
connective tissue cell | 4.11e-09 | 46 |
mesenchymal cell | 4.11e-09 | 46 |
hematopoietic lineage restricted progenitor cell | 9.78e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.11e-09 | 46 |
endocrine system | 1.10e-07 | 72 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.