FFCP PHASE1:Mm9::chr11:102749370..102749385,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=205|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:102749370..102749385,-|id=chr11:102749370..102749385,-|ontology_enrichment_celltype=CL:0002319!9.07e-24!43;CL:0000221!4.07e-23!44;CL:0000133!4.07e-23!44;CL:0002453!2.79e-22!8;CL:0000333!1.54e-21!10;CL:0000095!1.54e-21!10;CL:0000243!1.54e-21!10;CL:0000123!1.54e-21!10;CL:0000125!1.54e-21!10;CL:0000030!1.54e-21!10;CL:0000339!1.54e-21!10;CL:0000055!9.39e-20!50;CL:0000128!7.26e-17!6;CL:0000126!7.26e-17!6;CL:0000127!7.26e-17!6;CL:0002321!1.03e-12!70;CL:0000220!1.03e-12!70;CL:0000540!2.33e-09!33;CL:0000047!2.33e-09!33;CL:0000031!2.33e-09!33;CL:0000404!2.33e-09!33;CL:0002614!3.52e-09!3;CL:0000117!3.51e-08!23;CL:0000337!3.51e-08!23;CL:0000393!1.54e-07!39;CL:0000211!1.54e-07!39;CL:0000864!5.19e-07!2;CL:0000878!5.19e-07!2;CL:0000129!5.19e-07!2;CL:0002604!5.19e-07!2;CL:0002605!5.19e-07!2;CL:0002611!8.12e-07!2|ontology_enrichment_celltype_v019_2=CL:0002453,1.35e-41,8;CL:0000333,3.19e-33,10;CL:0000095,3.19e-33,10;CL:0000243,3.19e-33,10;CL:0000123,3.19e-33,10;CL:0000125,3.19e-33,10;CL:0000030,3.19e-33,10;CL:0000339,3.19e-33,10;CL:0000128,2.48e-28,6;CL:0000126,2.48e-28,6;CL:0000127,2.48e-28,6;CL:0002319,9.12e-22,43;CL:0000221,3.01e-21,44;CL:0000133,3.01e-21,44;CL:0002614,1.36e-20,3;CL:0000878,3.45e-15,2;CL:0002605,3.45e-15,2;CL:0000129,3.45e-15,2;CL:0002604,3.45e-15,2;CL:0002611,1.05e-14,2;CL:0002321,6.03e-13,70;CL:0002194,4.82e-08,4;CL:0000766,4.82e-08,4;CL:0000234,4.82e-08,4;CL:0000576,4.82e-08,4;CL:0000235,4.82e-08,4;CL:0000864,4.82e-08,4;CL:0002009,4.82e-08,4;CL:0000040,4.82e-08,4;CL:0000559,4.82e-08,4;CL:0000117,2.51e-07,23;CL:0000337,2.51e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.77e-22!75;UBERON:0001016!1.77e-22!75;UBERON:0001017!1.65e-21!73;UBERON:0005743!1.65e-21!73;UBERON:0004121!1.25e-17!102;UBERON:0000924!1.25e-17!102;UBERON:0006601!1.25e-17!102;UBERON:0003076!6.99e-17!12;UBERON:0003057!6.99e-17!12;UBERON:0002298!1.68e-15!6;UBERON:0001049!8.18e-13!52;UBERON:0005068!8.18e-13!52;UBERON:0006241!8.18e-13!52;UBERON:0007135!8.18e-13!52;UBERON:0002240!1.79e-11!6;UBERON:0005174!1.79e-11!6;UBERON:0001137!1.79e-11!6;UBERON:0002950!3.85e-11!4;UBERON:0001891!3.85e-11!4;UBERON:0009616!3.85e-11!4;UBERON:0002346!1.46e-10!71;UBERON:0003075!1.46e-10!71;UBERON:0007284!1.46e-10!71;UBERON:0001948!3.34e-09!5;UBERON:0002315!3.34e-09!5;UBERON:0002038!3.52e-09!3;UBERON:0002308!3.52e-09!3;UBERON:0009663!3.52e-09!3;UBERON:0009661!3.52e-09!3;UBERON:0006331!3.52e-09!3;UBERON:0000125!3.52e-09!3;UBERON:0002616!6.22e-09!49;UBERON:0000955!1.09e-08!50;UBERON:0006238!1.09e-08!50;UBERON:0000033!2.84e-08!63;UBERON:0002020!9.89e-08!34;UBERON:0004733!3.30e-07!6;UBERON:0004732!3.30e-07!6;UBERON:0002028!3.30e-07!6;UBERON:0007277!3.30e-07!6;UBERON:0002256!8.12e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.36e-20,3;UBERON:0009663,1.36e-20,3;UBERON:0009661,1.36e-20,3;UBERON:0000125,1.36e-20,3;UBERON:0002308,1.36e-20,3;UBERON:0002950,1.28e-15,4;UBERON:0001891,1.28e-15,4;UBERON:0009616,1.28e-15,4;UBERON:0010286,1.28e-15,4;UBERON:0002256,1.05e-14,2;UBERON:0001017,1.30e-14,73;UBERON:0001016,3.42e-14,75;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0001049,1.06e-09,52;UBERON:0005068,1.06e-09,52;UBERON:0006241,1.06e-09,52;UBERON:0007135,1.06e-09,52;UBERON:0002020,2.16e-09,34;UBERON:0000073,2.63e-09,54;UBERON:0003076,3.48e-09,12;UBERON:0003057,3.48e-09,12;UBERON:0002420,4.22e-08,8;UBERON:0007245,4.22e-08,8;UBERON:0010009,4.22e-08,8;UBERON:0010011,4.22e-08,8;UBERON:0000454,4.22e-08,8;UBERON:0002346,1.04e-07,64;UBERON:0003075,1.04e-07,64;UBERON:0007284,1.04e-07,64|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.52617609466313,10.5449367712546,10.1103547518627,3.07970127575798,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.98800331555214,13.0634223809329,0,0,0,2.28520787523043,3.53389665522582,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,1.67509799400829,2.25105044012672,1.68078072554491,0.883885756421003,0.427115042397309,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,0.117211686592203,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:102749370..102749385,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=205 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:102749370..102749385,- | |||
|id=chr11:102749370..102749385,- | |||
|ontology_enrichment_celltype=CL:0002319!9.07e-24!43;CL:0000221!4.07e-23!44;CL:0000133!4.07e-23!44;CL:0002453!2.79e-22!8;CL:0000333!1.54e-21!10;CL:0000095!1.54e-21!10;CL:0000243!1.54e-21!10;CL:0000123!1.54e-21!10;CL:0000125!1.54e-21!10;CL:0000030!1.54e-21!10;CL:0000339!1.54e-21!10;CL:0000055!9.39e-20!50;CL:0000128!7.26e-17!6;CL:0000126!7.26e-17!6;CL:0000127!7.26e-17!6;CL:0002321!1.03e-12!70;CL:0000220!1.03e-12!70;CL:0000540!2.33e-09!33;CL:0000047!2.33e-09!33;CL:0000031!2.33e-09!33;CL:0000404!2.33e-09!33;CL:0002614!3.52e-09!3;CL:0000117!3.51e-08!23;CL:0000337!3.51e-08!23;CL:0000393!1.54e-07!39;CL:0000211!1.54e-07!39;CL:0000864!5.19e-07!2;CL:0000878!5.19e-07!2;CL:0000129!5.19e-07!2;CL:0002604!5.19e-07!2;CL:0002605!5.19e-07!2;CL:0002611!8.12e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.35e-41,8;CL:0000333,3.19e-33,10;CL:0000095,3.19e-33,10;CL:0000243,3.19e-33,10;CL:0000123,3.19e-33,10;CL:0000125,3.19e-33,10;CL:0000030,3.19e-33,10;CL:0000339,3.19e-33,10;CL:0000128,2.48e-28,6;CL:0000126,2.48e-28,6;CL:0000127,2.48e-28,6;CL:0002319,9.12e-22,43;CL:0000221,3.01e-21,44;CL:0000133,3.01e-21,44;CL:0002614,1.36e-20,3;CL:0000878,3.45e-15,2;CL:0002605,3.45e-15,2;CL:0000129,3.45e-15,2;CL:0002604,3.45e-15,2;CL:0002611,1.05e-14,2;CL:0002321,6.03e-13,70;CL:0002194,4.82e-08,4;CL:0000766,4.82e-08,4;CL:0000234,4.82e-08,4;CL:0000576,4.82e-08,4;CL:0000235,4.82e-08,4;CL:0000864,4.82e-08,4;CL:0002009,4.82e-08,4;CL:0000040,4.82e-08,4;CL:0000559,4.82e-08,4;CL:0000117,2.51e-07,23;CL:0000337,2.51e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.77e-22!75;UBERON:0001016!1.77e-22!75;UBERON:0001017!1.65e-21!73;UBERON:0005743!1.65e-21!73;UBERON:0004121!1.25e-17!102;UBERON:0000924!1.25e-17!102;UBERON:0006601!1.25e-17!102;UBERON:0003076!6.99e-17!12;UBERON:0003057!6.99e-17!12;UBERON:0002298!1.68e-15!6;UBERON:0001049!8.18e-13!52;UBERON:0005068!8.18e-13!52;UBERON:0006241!8.18e-13!52;UBERON:0007135!8.18e-13!52;UBERON:0002240!1.79e-11!6;UBERON:0005174!1.79e-11!6;UBERON:0001137!1.79e-11!6;UBERON:0002950!3.85e-11!4;UBERON:0001891!3.85e-11!4;UBERON:0009616!3.85e-11!4;UBERON:0002346!1.46e-10!71;UBERON:0003075!1.46e-10!71;UBERON:0007284!1.46e-10!71;UBERON:0001948!3.34e-09!5;UBERON:0002315!3.34e-09!5;UBERON:0002038!3.52e-09!3;UBERON:0002308!3.52e-09!3;UBERON:0009663!3.52e-09!3;UBERON:0009661!3.52e-09!3;UBERON:0006331!3.52e-09!3;UBERON:0000125!3.52e-09!3;UBERON:0002616!6.22e-09!49;UBERON:0000955!1.09e-08!50;UBERON:0006238!1.09e-08!50;UBERON:0000033!2.84e-08!63;UBERON:0002020!9.89e-08!34;UBERON:0004733!3.30e-07!6;UBERON:0004732!3.30e-07!6;UBERON:0002028!3.30e-07!6;UBERON:0007277!3.30e-07!6;UBERON:0002256!8.12e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.36e-20,3;UBERON:0009663,1.36e-20,3;UBERON:0009661,1.36e-20,3;UBERON:0000125,1.36e-20,3;UBERON:0002308,1.36e-20,3;UBERON:0002950,1.28e-15,4;UBERON:0001891,1.28e-15,4;UBERON:0009616,1.28e-15,4;UBERON:0010286,1.28e-15,4;UBERON:0002256,1.05e-14,2;UBERON:0001017,1.30e-14,73;UBERON:0001016,3.42e-14,75;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0001049,1.06e-09,52;UBERON:0005068,1.06e-09,52;UBERON:0006241,1.06e-09,52;UBERON:0007135,1.06e-09,52;UBERON:0002020,2.16e-09,34;UBERON:0000073,2.63e-09,54;UBERON:0003076,3.48e-09,12;UBERON:0003057,3.48e-09,12;UBERON:0002420,4.22e-08,8;UBERON:0007245,4.22e-08,8;UBERON:0010009,4.22e-08,8;UBERON:0010011,4.22e-08,8;UBERON:0000454,4.22e-08,8;UBERON:0002346,1.04e-07,64;UBERON:0003075,1.04e-07,64;UBERON:0007284,1.04e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.52617609466313,10.5449367712546,10.1103547518627,3.07970127575798,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.98800331555214,13.0634223809329,0,0,0,2.28520787523043,3.53389665522582,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,1.67509799400829,2.25105044012672,1.68078072554491,0.883885756421003,0.427115042397309,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,0.117211686592203,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:102749370..102749385,- | |||
}} |
Revision as of 18:22, 12 September 2013
Short description: | p@chr11:102749370..102749385, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:102749370..102749385, - |
Coexpression cluster: | MCL_coexpression_mm9:205 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.35e-41 | 8 |
migratory neural crest cell | 3.19e-33 | 10 |
neuron associated cell | 3.19e-33 | 10 |
glial cell (sensu Vertebrata) | 3.19e-33 | 10 |
neuron associated cell (sensu Vertebrata) | 3.19e-33 | 10 |
glial cell | 3.19e-33 | 10 |
glioblast | 3.19e-33 | 10 |
glioblast (sensu Vertebrata) | 3.19e-33 | 10 |
oligodendrocyte | 2.48e-28 | 6 |
macroglial cell | 2.48e-28 | 6 |
astrocyte | 2.48e-28 | 6 |
neural cell | 9.12e-22 | 43 |
ectodermal cell | 3.01e-21 | 44 |
neurectodermal cell | 3.01e-21 | 44 |
neuron of the substantia nigra | 1.36e-20 | 3 |
central nervous system macrophage | 3.45e-15 | 2 |
astrocyte of the cerebral cortex | 3.45e-15 | 2 |
microglial cell | 3.45e-15 | 2 |
astrocyte of the hippocampus | 3.45e-15 | 2 |
neuron of the dorsal spinal cord | 1.05e-14 | 2 |
embryonic cell | 6.03e-13 | 70 |
monopoietic cell | 4.82e-08 | 4 |
myeloid leukocyte | 4.82e-08 | 4 |
phagocyte | 4.82e-08 | 4 |
monocyte | 4.82e-08 | 4 |
macrophage | 4.82e-08 | 4 |
tissue-resident macrophage | 4.82e-08 | 4 |
macrophage dendritic cell progenitor | 4.82e-08 | 4 |
monoblast | 4.82e-08 | 4 |
promonocyte | 4.82e-08 | 4 |
CNS neuron (sensu Vertebrata) | 2.51e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.51e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 1.36e-20 | 3 |
telencephalic nucleus | 1.36e-20 | 3 |
midbrain nucleus | 1.36e-20 | 3 |
neural nucleus | 1.36e-20 | 3 |
nucleus of brain | 1.36e-20 | 3 |
regional part of midbrain | 1.28e-15 | 4 |
midbrain | 1.28e-15 | 4 |
presumptive midbrain | 1.28e-15 | 4 |
midbrain neural tube | 1.28e-15 | 4 |
dorsal horn of spinal cord | 1.05e-14 | 2 |
central nervous system | 1.30e-14 | 73 |
nervous system | 3.42e-14 | 75 |
ectoderm-derived structure | 5.96e-11 | 95 |
ectoderm | 5.96e-11 | 95 |
presumptive ectoderm | 5.96e-11 | 95 |
neural tube | 1.06e-09 | 52 |
neural rod | 1.06e-09 | 52 |
future spinal cord | 1.06e-09 | 52 |
neural keel | 1.06e-09 | 52 |
gray matter | 2.16e-09 | 34 |
regional part of nervous system | 2.63e-09 | 54 |
posterior neural tube | 3.48e-09 | 12 |
chordal neural plate | 3.48e-09 | 12 |
basal ganglion | 4.22e-08 | 8 |
nuclear complex of neuraxis | 4.22e-08 | 8 |
aggregate regional part of brain | 4.22e-08 | 8 |
collection of basal ganglia | 4.22e-08 | 8 |
cerebral subcortex | 4.22e-08 | 8 |
neurectoderm | 1.04e-07 | 64 |
neural plate | 1.04e-07 | 64 |
presumptive neural plate | 1.04e-07 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.