FFCP PHASE1:Mm9::chr19:6114850..6114862,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=131|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:6114850..6114862,+|id=chr19:6114850..6114862,+|ontology_enrichment_celltype=CL:0000239!2.45e-17!6;CL:0000677!2.45e-17!6;CL:0000212!2.45e-17!6;CL:0000584!2.45e-17!6;CL:0000075!8.81e-15!7;CL:0002563!2.28e-11!9;CL:0002251!2.28e-11!9;CL:0000473!3.98e-10!3;CL:0000627!3.98e-10!3;CL:0000682!3.98e-10!3;CL:0000066!2.44e-08!25|ontology_enrichment_celltype_v019_2=CL:0000682,1.86e-12,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!9.70e-33!43;UBERON:0000344!8.25e-28!15;UBERON:0005409!1.31e-22!59;UBERON:0001242!5.92e-22!13;UBERON:0000060!5.92e-22!13;UBERON:0001262!5.92e-22!13;UBERON:0004786!5.92e-22!13;UBERON:0004923!1.82e-16!24;UBERON:0003350!2.28e-11!9;UBERON:0004808!2.28e-11!9;UBERON:0001277!2.28e-11!9;UBERON:0000331!7.13e-11!3;UBERON:0002116!7.13e-11!3;UBERON:0001204!7.13e-11!3;UBERON:0001168!7.13e-11!3;UBERON:0001007!4.46e-10!128;UBERON:0001555!4.46e-10!128;UBERON:0007026!4.46e-10!128;UBERON:0004119!7.63e-10!130;UBERON:0000925!7.63e-10!130;UBERON:0006595!7.63e-10!130;UBERON:0000485!3.41e-09!11;UBERON:0004921!4.34e-08!126;UBERON:0004185!4.34e-08!126;UBERON:0001962!8.61e-08!2;UBERON:0001961!8.61e-08!2;UBERON:0001744!8.61e-08!2|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.96e-29,15;UBERON:0000331,1.37e-27,3;UBERON:0002116,1.37e-27,3;UBERON:0001204,1.37e-27,3;UBERON:0001168,1.37e-27,3;UBERON:0002108,6.90e-21,4;UBERON:0001962,5.72e-19,2;UBERON:0001961,5.72e-19,2;UBERON:0001744,5.72e-19,2;UBERON:0004923,6.59e-18,24;UBERON:0001242,3.95e-17,13;UBERON:0001262,3.95e-17,13;UBERON:0004786,3.95e-17,13;UBERON:0002465,5.52e-13,3;UBERON:0003199,2.01e-10,1;UBERON:0000160,4.19e-10,31|phase1_expression=0,1.74487703819681,0.454999239389536,0.60492842261366,1.50268718983904,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07990149631429,3.21172993494038,0.57423196411502,1.7230479846363,1.50829862880122,23.372880593134,2.52030129759931,1.99557459589774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0.201683524623343,0.667134131534611,0.570676878337677,0.949058123089023,1.15289268306808,0.502670417600539,0,0.779856348476481,0.898819408654221,0.432276099749388,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr19:6114850..6114862,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=131 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:6114850..6114862,+ | |||
|id=chr19:6114850..6114862,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.45e-17!6;CL:0000677!2.45e-17!6;CL:0000212!2.45e-17!6;CL:0000584!2.45e-17!6;CL:0000075!8.81e-15!7;CL:0002563!2.28e-11!9;CL:0002251!2.28e-11!9;CL:0000473!3.98e-10!3;CL:0000627!3.98e-10!3;CL:0000682!3.98e-10!3;CL:0000066!2.44e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.86e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.70e-33!43;UBERON:0000344!8.25e-28!15;UBERON:0005409!1.31e-22!59;UBERON:0001242!5.92e-22!13;UBERON:0000060!5.92e-22!13;UBERON:0001262!5.92e-22!13;UBERON:0004786!5.92e-22!13;UBERON:0004923!1.82e-16!24;UBERON:0003350!2.28e-11!9;UBERON:0004808!2.28e-11!9;UBERON:0001277!2.28e-11!9;UBERON:0000331!7.13e-11!3;UBERON:0002116!7.13e-11!3;UBERON:0001204!7.13e-11!3;UBERON:0001168!7.13e-11!3;UBERON:0001007!4.46e-10!128;UBERON:0001555!4.46e-10!128;UBERON:0007026!4.46e-10!128;UBERON:0004119!7.63e-10!130;UBERON:0000925!7.63e-10!130;UBERON:0006595!7.63e-10!130;UBERON:0000485!3.41e-09!11;UBERON:0004921!4.34e-08!126;UBERON:0004185!4.34e-08!126;UBERON:0001962!8.61e-08!2;UBERON:0001961!8.61e-08!2;UBERON:0001744!8.61e-08!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.96e-29,15;UBERON:0000331,1.37e-27,3;UBERON:0002116,1.37e-27,3;UBERON:0001204,1.37e-27,3;UBERON:0001168,1.37e-27,3;UBERON:0002108,6.90e-21,4;UBERON:0001962,5.72e-19,2;UBERON:0001961,5.72e-19,2;UBERON:0001744,5.72e-19,2;UBERON:0004923,6.59e-18,24;UBERON:0001242,3.95e-17,13;UBERON:0001262,3.95e-17,13;UBERON:0004786,3.95e-17,13;UBERON:0002465,5.52e-13,3;UBERON:0003199,2.01e-10,1;UBERON:0000160,4.19e-10,31 | |||
|phase1_expression=0,1.74487703819681,0.454999239389536,0.60492842261366,1.50268718983904,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07990149631429,3.21172993494038,0.57423196411502,1.7230479846363,1.50829862880122,23.372880593134,2.52030129759931,1.99557459589774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0.201683524623343,0.667134131534611,0.570676878337677,0.949058123089023,1.15289268306808,0.502670417600539,0,0.779856348476481,0.898819408654221,0.432276099749388,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:6114850..6114862,+ | |||
}} |
Revision as of 18:19, 13 September 2013
Short description: | p@chr19:6114850..6114862, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:6114850..6114862, + |
Coexpression cluster: | MCL_coexpression_mm9:131 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.86e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 9.96e-29 | 15 |
ileal mucosa | 1.37e-27 | 3 |
ileum | 1.37e-27 | 3 |
mucosa of small intestine | 1.37e-27 | 3 |
wall of small intestine | 1.37e-27 | 3 |
small intestine | 6.90e-21 | 4 |
gut-associated lymphoid tissue | 5.72e-19 | 2 |
mucosa-associated lymphoid tissue | 5.72e-19 | 2 |
lymphoid tissue | 5.72e-19 | 2 |
organ component layer | 6.59e-18 | 24 |
intestinal mucosa | 3.95e-17 | 13 |
wall of intestine | 3.95e-17 | 13 |
gastrointestinal system mucosa | 3.95e-17 | 13 |
lymphoid system | 5.52e-13 | 3 |
egg chamber | 2.01e-10 | 1 |
intestine | 4.19e-10 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.