FFCP PHASE1:Mm9::chr4:16090639..16090652,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=192656|HGNC=|UniProt=P58801,Q547H1|association_with_transcript=0bp_to_NM_138952,uc008sbr.1,uc012das.1_5end|description=CAGE_peak_2_at_Ripk2_5end|id=chr4:16090639..16090652,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!5.98e-08!193;UBERON:0004120!5.98e-08!193;UBERON:0006603!5.98e-08!193|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.18e-07,32|phase1_expression=0.160148847104794,1.74487703819681,0,1.20985684522732,2.50447864973174,1.34303417529512,1.63528848416868,1.16210991097419,1.97104211012333,2.57470978954193,0,0.239316476986009,0.513602189793617,0.437102012094987,1.33243904726265,0.404950534779652,1.39912375625629,2.36596624018678,1.09691546884591,2.12194825899015,1.61582251287033,1.09220046320974,2.61199789138935,0.639969691173627,0.22940928106717,0.57423196411502,1.29228598847722,0.646413698057667,0.570070258369122,0.756090389279792,0.665191531965914,0.635030673459631,0,0,0.866554859253824,0.166234645358492,1.02084678131185,1.25559489221072,0.7813353445238,2.09409497589519,0,0.683045484958446,0.971020706062307,4.65818226509636,4.1564541800001,1.46837401729345,1.56478268869608,1.09012578190223,0,2.13872888981712,0.699932108126813,0,3.02008690903925,2.90144856804538,1.68046899571232,7.97504251711436,5.73066879877513,4.64104883049698,0,0.528990979272033,0,0.338844532069132,0.889294796111139,4.04954872776629,6.92206453796882,2.8419204597844,0.898800331555214,1.15265491596466,0.414758449233911,0.135005938331691,0.420649922702764,1.14260393761521,1.10434270475807,0,0.0958454710182364,0.919218786610021,1.10115880999389,0.638436690425939,0.614426133024974,0.131886287730194,0.182975287204819,0,1.11673199600552,1.12552522006336,0.61119299110724,1.17851434189467,1.42371680799103,0.186399445825301,2.49896437999507,2.87171928405785,4.92769630792852,1.72084775396277,4.75979933595425,1.61910957491345,5.19821133958135,2.68816132258401,1.26399978118577,4.77204903218562,3.89679006904303,3.5333957451034,1.54927761754349,2.56652954828636,7.64415719119937,7.11066703153331,2.16491041011214,3.54703811665138,3.0331466700887,1.1418387971906,3.88406825470758,2.52351636410202,1.38788261412909,1.21786191324856,1.38369298353635,1.05505848386836,1.52865319276416,1.88499886994513,1.97755974187499,3.7595832799177,1.76922110389975,1.29413479957927,1.54589062922275,1.45462575940567,5.59175283654366,0.585561594023094,0.628340120440365,1.27728527604296,2.39630249011841,2.99951365496704,1.01656181658452,0.748953197024114,0.915001205637253,0.125654352112864,0.869121600961382,0.767146371990992,0.62336413367868,0.648965052271031,1.42575109390443,1.24406970610093,0.505445516867349,1.26265113531884,0.780722657776222,0.459804208866946,0.540186389416048,0.452114453507145,1.02054748726992,1.0249097622788,0.655912071918102,1.29351685369508,0.215567992932842,0.567318240503458,1.23165786914764,0.657587197282725,0.556094498451196,1.39300866608867,2.26360350048738,1.19420560091096,2.1066395619397,2.31613116403244,1.70498099637356,0.828503090142008,1.87620847984877,0.900310307305074,0.473489471170421,1.96764231747404,1.07986979021165,0.930135779001631,1.07309360559848,1.05088808130453,0.658239399653922,0.820837320395476,1.13496333364198,2.19299981137998,2.85415149878366,1.61047702512446,0.841159794256509,0.411618449517138,0.330418782983798,0.793351699990633,0.213288250535234,0.928946687441754,0,0,0.667134131534611,0.760902504450237,1.89811624617805,0.988193728344065,0.251335208800269,0.795825888164603,0.779856348476481,1.79763881730844,0.648414149624083,1.59313018603494,0.948339504765408,0.685491075658373,1.1270773567308,1.22190796707189,0.775809948670503,0.911765658574141,0.822074982615345,0.738050739898011,1.255989822731,2.09775178667061,4.44678940630723,0.83422552858047,0.982794975566015,0.224862112384854,0.811440485554012,0,0.50925170356284,0,1.78348749452539,1.64736847912849,1.43768206527355,2.23284568601102,1.5601883655728,2.27320990152401,0.896987067609561,1.92977408545347,2.95605104266567,0.568474235311454,1.14075483509418,0.678980343100753,0.704070744865506,1.50755631697634,1.19021820443007,2.53673742215138,1.7339865851681,2.87904096543407,2.39182152986231,3.11340297959902,2.41758974612254,2.74833211304872,7.53956419696361,5.4390568381871,0,0.827810238914197,0.80275294993896,0.586058432961016,1.3114795630134,2.01976741763498,1.57754109708128,1.17131623288992,0.861693590931196,1.43381278771531,1.11399337041197,0.849229592366497,1.61924280669958,1.16902343164525,0.395287777946524,0.963963949265421,3.12268187458191,0.890328018336276,0.81443479676788,2.63952196756057,3.98235415019888,0.242780636154981,0.906970670894253,1.32023555829129,0.590603785761546,0.614870295887855,3.10113951801865,1.45413491791002,1.78248689192361,1.26414703174326,0,0,3.06395645178409,0.540183282093931,0.129358683782755,1.07168517515796,0.532020700926821,0.713475270408282,1.31639216481697,1.2178597964584,1.64270195644597,1.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| ||
|EntrezGene=192656 | |||
|HGNC= | |||
|UniProt=P58801,Q547H1 | |||
|association_with_transcript=0bp_to_NM_138952,uc008sbr.1,uc012das.1_5end | |||
|description=CAGE_peak_2_at_Ripk2_5end | |||
|id=chr4:16090639..16090652,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!5.98e-08!193;UBERON:0004120!5.98e-08!193;UBERON:0006603!5.98e-08!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.18e-07,32 | |||
|phase1_expression=0.160148847104794,1.74487703819681,0,1.20985684522732,2.50447864973174,1.34303417529512,1.63528848416868,1.16210991097419,1.97104211012333,2.57470978954193,0,0.239316476986009,0.513602189793617,0.437102012094987,1.33243904726265,0.404950534779652,1.39912375625629,2.36596624018678,1.09691546884591,2.12194825899015,1.61582251287033,1.09220046320974,2.61199789138935,0.639969691173627,0.22940928106717,0.57423196411502,1.29228598847722,0.646413698057667,0.570070258369122,0.756090389279792,0.665191531965914,0.635030673459631,0,0,0.866554859253824,0.166234645358492,1.02084678131185,1.25559489221072,0.7813353445238,2.09409497589519,0,0.683045484958446,0.971020706062307,4.65818226509636,4.1564541800001,1.46837401729345,1.56478268869608,1.09012578190223,0,2.13872888981712,0.699932108126813,0,3.02008690903925,2.90144856804538,1.68046899571232,7.97504251711436,5.73066879877513,4.64104883049698,0,0.528990979272033,0,0.338844532069132,0.889294796111139,4.04954872776629,6.92206453796882,2.8419204597844,0.898800331555214,1.15265491596466,0.414758449233911,0.135005938331691,0.420649922702764,1.14260393761521,1.10434270475807,0,0.0958454710182364,0.919218786610021,1.10115880999389,0.638436690425939,0.614426133024974,0.131886287730194,0.182975287204819,0,1.11673199600552,1.12552522006336,0.61119299110724,1.17851434189467,1.42371680799103,0.186399445825301,2.49896437999507,2.87171928405785,4.92769630792852,1.72084775396277,4.75979933595425,1.61910957491345,5.19821133958135,2.68816132258401,1.26399978118577,4.77204903218562,3.89679006904303,3.5333957451034,1.54927761754349,2.56652954828636,7.64415719119937,7.11066703153331,2.16491041011214,3.54703811665138,3.0331466700887,1.1418387971906,3.88406825470758,2.52351636410202,1.38788261412909,1.21786191324856,1.38369298353635,1.05505848386836,1.52865319276416,1.88499886994513,1.97755974187499,3.7595832799177,1.76922110389975,1.29413479957927,1.54589062922275,1.45462575940567,5.59175283654366,0.585561594023094,0.628340120440365,1.27728527604296,2.39630249011841,2.99951365496704,1.01656181658452,0.748953197024114,0.915001205637253,0.125654352112864,0.869121600961382,0.767146371990992,0.62336413367868,0.648965052271031,1.42575109390443,1.24406970610093,0.505445516867349,1.26265113531884,0.780722657776222,0.459804208866946,0.540186389416048,0.452114453507145,1.02054748726992,1.0249097622788,0.655912071918102,1.29351685369508,0.215567992932842,0.567318240503458,1.23165786914764,0.657587197282725,0.556094498451196,1.39300866608867,2.26360350048738,1.19420560091096,2.1066395619397,2.31613116403244,1.70498099637356,0.828503090142008,1.87620847984877,0.900310307305074,0.473489471170421,1.96764231747404,1.07986979021165,0.930135779001631,1.07309360559848,1.05088808130453,0.658239399653922,0.820837320395476,1.13496333364198,2.19299981137998,2.85415149878366,1.61047702512446,0.841159794256509,0.411618449517138,0.330418782983798,0.793351699990633,0.213288250535234,0.928946687441754,0,0,0.667134131534611,0.760902504450237,1.89811624617805,0.988193728344065,0.251335208800269,0.795825888164603,0.779856348476481,1.79763881730844,0.648414149624083,1.59313018603494,0.948339504765408,0.685491075658373,1.1270773567308,1.22190796707189,0.775809948670503,0.911765658574141,0.822074982615345,0.738050739898011,1.255989822731,2.09775178667061,4.44678940630723,0.83422552858047,0.982794975566015,0.224862112384854,0.811440485554012,0,0.50925170356284,0,1.78348749452539,1.64736847912849,1.43768206527355,2.23284568601102,1.5601883655728,2.27320990152401,0.896987067609561,1.92977408545347,2.95605104266567,0.568474235311454,1.14075483509418,0.678980343100753,0.704070744865506,1.50755631697634,1.19021820443007,2.53673742215138,1.7339865851681,2.87904096543407,2.39182152986231,3.11340297959902,2.41758974612254,2.74833211304872,7.53956419696361,5.4390568381871,0,0.827810238914197,0.80275294993896,0.586058432961016,1.3114795630134,2.01976741763498,1.57754109708128,1.17131623288992,0.861693590931196,1.43381278771531,1.11399337041197,0.849229592366497,1.61924280669958,1.16902343164525,0.395287777946524,0.963963949265421,3.12268187458191,0.890328018336276,0.81443479676788,2.63952196756057,3.98235415019888,0.242780636154981,0.906970670894253,1.32023555829129,0.590603785761546,0.614870295887855,3.10113951801865,1.45413491791002,1.78248689192361,1.26414703174326,0,0,3.06395645178409,0.540183282093931,0.129358683782755,1.07168517515796,0.532020700926821,0.713475270408282,1.31639216481697,1.2178597964584,1.64270195644597,1.27099242518292,4.41056796109924,4.9465875882444,2.26050197374268,2.11095237248546,1.79058516004705,2.1338316966858,0.874442509889552,0.741701208042039,1.87957968877638,1.857481811669,0.925972636848558,0.565105371014073,0.683471138605126,1.37266903923914,1.69978429993855,2.09927178485487,1.24379976423981,2.86401185404534,0.949007980743406,1.82987520414164,1.51207477150522,1.88179466413022,1.74690050996942,1.21377911746339,1.73572257023205,1.83229159388821,0.90730481304255,2.4853572523477,0,0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| |||
|short_description=p2@Ripk2 | |||
}} | |||
Revision as of 04:45, 14 September 2013
| Short description: | p2@Ripk2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Ripk2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_NM_138952, uc008sbr.1, uc012das.1_5end |
| EntrezGene: | Ripk2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system | 3.18e-07 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
