FFCP PHASE1:Mm9::chr4:44180889..44180941,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=73469|HGNC=|MCL_coexpression_id=0|UniProt=B1AWE7|association_with_transcript=-12bp_to_ENSMUST00000143337_5end|description=CAGE_peak_5_at_Rnf38_5end|id=chr4:44180889..44180941,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.80074423552397,1.74487703819681,2.72999543633722,3.32710632437513,3.50627010962443,2.18243053485457,1.63528848416868,4.39019299701359,1.267098499365,0.936258105287974,0.68487187290202,1.03703806693937,4.62241970814255,5.76974655965383,1.66554880907831,2.02475267389826,3.49780939064073,2.36596624018678,2.60517423850904,1.27316895539409,13.0966666832647,1.39007331681239,0.783599367416806,1.75991665072747,0.91763712426868,1.72269589234506,1.7230479846363,1.29282739611533,1.71021077510736,2.26827116783938,1.33038306393183,1.27006134691926,0.61506478758457,0,2.59966457776147,1.49611180822643,1.42918549383658,6.69650609179052,5.4693474116666,3.66466620781659,2.35292595212406,9.56263678941824,5.82612423637384,0.503587271902309,0.405507724878058,0.367093504323363,0.782391344348039,0.872100625521786,0.439372365468944,0.388859798148567,0.55994568650145,0,3.52343472721246,7.25362142011344,3.6970317905671,0.771778308107841,0.85960031981627,0,4.85559506063035,3.70293685490423,6.97214543856797,0.677689064138264,0,2.6996991518442,0.988866362566974,1.4209602298922,0,0.384218305321555,3.52544681848824,2.43010688997043,3.15487442027073,0.571301968807607,0.441737081903227,2.08234358665422,3.06705507258356,4.5960939330501,0,0.638436690425939,1.99688493233117,3.69281605644543,3.47653045689157,1.04182674111352,0.279182999001381,1.68828783009504,0.45839474333043,1.76777151284201,0.996601765593721,1.67759501242771,0.681535739998656,1.88928900266964,0,1.72084775396277,0.679971333707751,0,1.29955283489534,0.896053774194671,1.96622188184453,0.681721290312231,0.259786004602869,0,0.845060518660083,0,0,0,1.5154372870785,2.02687892380079,2.02209778005913,3.65388415100992,6.21450920753212,0.445326417194474,1.38788261412909,1.52232739156071,0.461230994512117,1.05505848386836,0.587943535678524,1.0053327306374,0.741584903203122,1.44599356919912,9.73071607144862,1.13236794963186,3.09178125844551,1.93950101254089,5.59175283654366,1.46390398505774,1.67557365450764,2.81002760729451,1.31796636956512,0,0.889491589511453,0.748953197024114,0,2.26177833803156,0.869121600961382,0.767146371990992,0.83115217823824,0.324482526135515,1.52759045775474,3.98102305952298,3.0326731012041,1.68353484709179,1.95180664444056,2.06911893990126,3.78130472591233,1.80845781402858,2.31324097114515,1.15302348256365,1.12442069471675,0.517406741478031,1.94011193639558,1.89106080167819,1.23165786914764,0.876782929710299,1.11218899690239,1.74126083261083,0.823128545631774,0.398068533636986,0,0.51469581422943,1.70498099637356,2.27838349789052,1.64168241986767,1.80062061461015,1.65721314909647,1.57411385397923,1.54267112887378,1.62773761325285,2.95100741539581,1.63471479314037,1.97471819896177,1.14917224855367,1.78351381000883,1.31579988682799,0.878200461164203,0.805238512562231,0.210289948564127,2.77842453424068,3.63460661282178,1.58670339998127,0.853153002140936,1.16118335930219,1.67527699718721,1.4117846723634,0.889512175379481,0.570676878337677,0.949058123089023,0.494096864172033,1.25667604400135,1.39269530428806,1.55971269695296,1.79763881730844,3.24207074812041,3.18626037206988,0.189667900953082,0.571242563048644,3.38123207019241,1.22190796707189,0.775809948670503,0.771494018793504,1.39120381673366,0.738050739898011,1.72698600625512,0.740382983530803,0.592905254174298,2.33583148002532,2.55526693647164,2.9232074610031,4.86864291332407,3.13530307678142,2.5462585178142,2.01387296215567,1.29708181420028,1.09824565275233,0,1.48856379067401,1.24815069245824,1.01031551178845,0.538192240565737,1.4473305640901,3.14080423283228,0.947457058852424,1.62964976442026,1.35796068620151,1.17345124144251,2.34508760418542,0.952174563544055,1.56106918286239,2.04925687338048,1.55025282754142,2.23236676120482,0.81931657357869,2.41758974612254,1.3018415272336,1.50791283939272,2.17562273527484,3.44234991113325,2.48343071674259,1.12385412991454,0.35163505977661,0.655739781506702,0.252470927204373,1.57754109708128,2.34263246577983,3.44677436372478,0.477937595905104,1.11399337041197,1.69845918473299,2.02405350837447,0.876767573733936,1.18586333383957,0.321321316421807,2.83880170416537,1.06839362200353,0.977321756121456,3.29940245945071,0,0.485561272309963,0.906970670894253,0.565815239267694,1.47650946440386,0.922305443831782,2.32585463851399,2.18120237686503,1.06949213515416,2.21225730555071,0,2.06271086496374,1.36175842301515,0.900305470156551,1.29358683782755,1.28602221018955,1.77340233642274,1.24858172321449,1.31639216481697,0.608929898229199,0.938686832254841,4.2366414172764,3.30792597082443,4.45192882941996,3.71368181400583,2.53314284698255,2.86493625607528,3.44695889464629,1.1659233465194,1.29797711407357,4.27177201994632,1.857481811669,2.77791791054568,4.52084296811258,5.87785179200408,3.66045077130436,1.01987057996313,1.25956307091292,0.690999869022119,1.90934123603023,1.89801596148681,1.01659733563424,1.29606408986162,1.46361807210128,0.87345025498471,2.29269388854195,1.65306911450672,1.83229159388821,1.03691978633434,1.86401793926078,113.865973614206,1.19613236835183,0.992750942742586,0.777804753376191,0.645799117388655,0.168956125490778,0.704143431874524,0.911430693907651,0.734015410979976,4.59009829569411,45.7967709950006,1.58005560314089,1.01362607645082,1.43795340030758,1.81889152168913,1.61124026100733,2.18549490259391,1.80293174279953,1.77227432609493,2.01932899896295,2.057583779685,2.62148081355785,2.82627854145282,2.5977197242889,1.98690733708667,1.81384306892169,0.443971906748129,1.07656627931371,1.84673078000486,2.51146472241848,2.81523713176773,3.6630324853453,2.57242054894879,3.51100472824754,0.564751842617067,0.920650473014354,1.14579102687879,1.3748254587495,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0,1.3492355185943,3.59122386060928,2.39027048055788,2.18796045361465,1.88651846365184,1.65459157605013,1.55572709461131,0.824140228955577,1.60459604795908,2.02157769411038,2.5347929989024,1.50901073108861,1.87283014939765,1.40855335290712,1.78049953762401,0.952587382566147,2.54945517078682,1.35036454324594,0.824171801606613,1.76638704161277,2.74295401908332,2.48466128623072,1.43061713968393,1.0174249164263,1.31753132581463,1.09998990259179,2.74391959309159,1.8414879800649,0.950628796921032,0,1.30498519936592,2.1670986122624,0.818462086339379,1.70430525304563,1.73615949883027,2.99772693525535,1.63752125911786,2.79332370262788,1.72159498861959,1.98532277207564,1.39120701372253|short_description=p5@Rnf38}} | ||
|EntrezGene=73469 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=B1AWE7 | |||
|association_with_transcript=-12bp_to_ENSMUST00000143337_5end | |||
|description=CAGE_peak_5_at_Rnf38_5end | |||
|id=chr4:44180889..44180941,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.80074423552397,1.74487703819681,2.72999543633722,3.32710632437513,3.50627010962443,2.18243053485457,1.63528848416868,4.39019299701359,1.267098499365,0.936258105287974,0.68487187290202,1.03703806693937,4.62241970814255,5.76974655965383,1.66554880907831,2.02475267389826,3.49780939064073,2.36596624018678,2.60517423850904,1.27316895539409,13.0966666832647,1.39007331681239,0.783599367416806,1.75991665072747,0.91763712426868,1.72269589234506,1.7230479846363,1.29282739611533,1.71021077510736,2.26827116783938,1.33038306393183,1.27006134691926,0.61506478758457,0,2.59966457776147,1.49611180822643,1.42918549383658,6.69650609179052,5.4693474116666,3.66466620781659,2.35292595212406,9.56263678941824,5.82612423637384,0.503587271902309,0.405507724878058,0.367093504323363,0.782391344348039,0.872100625521786,0.439372365468944,0.388859798148567,0.55994568650145,0,3.52343472721246,7.25362142011344,3.6970317905671,0.771778308107841,0.85960031981627,0,4.85559506063035,3.70293685490423,6.97214543856797,0.677689064138264,0,2.6996991518442,0.988866362566974,1.4209602298922,0,0.384218305321555,3.52544681848824,2.43010688997043,3.15487442027073,0.571301968807607,0.441737081903227,2.08234358665422,3.06705507258356,4.5960939330501,0,0.638436690425939,1.99688493233117,3.69281605644543,3.47653045689157,1.04182674111352,0.279182999001381,1.68828783009504,0.45839474333043,1.76777151284201,0.996601765593721,1.67759501242771,0.681535739998656,1.88928900266964,0,1.72084775396277,0.679971333707751,0,1.29955283489534,0.896053774194671,1.96622188184453,0.681721290312231,0.259786004602869,0,0.845060518660083,0,0,0,1.5154372870785,2.02687892380079,2.02209778005913,3.65388415100992,6.21450920753212,0.445326417194474,1.38788261412909,1.52232739156071,0.461230994512117,1.05505848386836,0.587943535678524,1.0053327306374,0.741584903203122,1.44599356919912,9.73071607144862,1.13236794963186,3.09178125844551,1.93950101254089,5.59175283654366,1.46390398505774,1.67557365450764,2.81002760729451,1.31796636956512,0,0.889491589511453,0.748953197024114,0,2.26177833803156,0.869121600961382,0.767146371990992,0.83115217823824,0.324482526135515,1.52759045775474,3.98102305952298,3.0326731012041,1.68353484709179,1.95180664444056,2.06911893990126,3.78130472591233,1.80845781402858,2.31324097114515,1.15302348256365,1.12442069471675,0.517406741478031,1.94011193639558,1.89106080167819,1.23165786914764,0.876782929710299,1.11218899690239,1.74126083261083,0.823128545631774,0.398068533636986,0,0.51469581422943,1.70498099637356,2.27838349789052,1.64168241986767,1.80062061461015,1.65721314909647,1.57411385397923,1.54267112887378,1.62773761325285,2.95100741539581,1.63471479314037,1.97471819896177,1.14917224855367,1.78351381000883,1.31579988682799,0.878200461164203,0.805238512562231,0.210289948564127,2.77842453424068,3.63460661282178,1.58670339998127,0.853153002140936,1.16118335930219,1.67527699718721,1.4117846723634,0.889512175379481,0.570676878337677,0.949058123089023,0.494096864172033,1.25667604400135,1.39269530428806,1.55971269695296,1.79763881730844,3.24207074812041,3.18626037206988,0.189667900953082,0.571242563048644,3.38123207019241,1.22190796707189,0.775809948670503,0.771494018793504,1.39120381673366,0.738050739898011,1.72698600625512,0.740382983530803,0.592905254174298,2.33583148002532,2.55526693647164,2.9232074610031,4.86864291332407,3.13530307678142,2.5462585178142,2.01387296215567,1.29708181420028,1.09824565275233,0,1.48856379067401,1.24815069245824,1.01031551178845,0.538192240565737,1.4473305640901,3.14080423283228,0.947457058852424,1.62964976442026,1.35796068620151,1.17345124144251,2.34508760418542,0.952174563544055,1.56106918286239,2.04925687338048,1.55025282754142,2.23236676120482,0.81931657357869,2.41758974612254,1.3018415272336,1.50791283939272,2.17562273527484,3.44234991113325,2.48343071674259,1.12385412991454,0.35163505977661,0.655739781506702,0.252470927204373,1.57754109708128,2.34263246577983,3.44677436372478,0.477937595905104,1.11399337041197,1.69845918473299,2.02405350837447,0.876767573733936,1.18586333383957,0.321321316421807,2.83880170416537,1.06839362200353,0.977321756121456,3.29940245945071,0,0.485561272309963,0.906970670894253,0.565815239267694,1.47650946440386,0.922305443831782,2.32585463851399,2.18120237686503,1.06949213515416,2.21225730555071,0,2.06271086496374,1.36175842301515,0.900305470156551,1.29358683782755,1.28602221018955,1.77340233642274,1.24858172321449,1.31639216481697,0.608929898229199,0.938686832254841,4.2366414172764,3.30792597082443,4.45192882941996,3.71368181400583,2.53314284698255,2.86493625607528,3.44695889464629,1.1659233465194,1.29797711407357,4.27177201994632,1.857481811669,2.77791791054568,4.52084296811258,5.87785179200408,3.66045077130436,1.01987057996313,1.25956307091292,0.690999869022119,1.90934123603023,1.89801596148681,1.01659733563424,1.29606408986162,1.46361807210128,0.87345025498471,2.29269388854195,1.65306911450672,1.83229159388821,1.03691978633434,1.86401793926078,113.865973614206,1.19613236835183,0.992750942742586,0.777804753376191,0.645799117388655,0.168956125490778,0.704143431874524,0.911430693907651,0.734015410979976,4.59009829569411,45.7967709950006,1.58005560314089,1.01362607645082,1.43795340030758,1.81889152168913,1.61124026100733,2.18549490259391,1.80293174279953,1.77227432609493,2.01932899896295,2.057583779685,2.62148081355785,2.82627854145282,2.5977197242889,1.98690733708667,1.81384306892169,0.443971906748129,1.07656627931371,1.84673078000486,2.51146472241848,2.81523713176773,3.6630324853453,2.57242054894879,3.51100472824754,0.564751842617067,0.920650473014354,1.14579102687879,1.3748254587495,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0,1.3492355185943,3.59122386060928,2.39027048055788,2.18796045361465,1.88651846365184,1.65459157605013,1.55572709461131,0.824140228955577,1.60459604795908,2.02157769411038,2.5347929989024,1.50901073108861,1.87283014939765,1.40855335290712,1.78049953762401,0.952587382566147,2.54945517078682,1.35036454324594,0.824171801606613,1.76638704161277,2.74295401908332,2.48466128623072,1.43061713968393,1.0174249164263,1.31753132581463,1.09998990259179,2.74391959309159,1.8414879800649,0.950628796921032,0,1.30498519936592,2.1670986122624,0.818462086339379,1.70430525304563,1.73615949883027,2.99772693525535,1.63752125911786,2.79332370262788,1.72159498861959,1.98532277207564,1.39120701372253 | |||
|short_description=p5@Rnf38 | |||
}} | |||
Revision as of 05:03, 14 September 2013
| Short description: | p5@Rnf38 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Rnf38_5end |
| Coexpression cluster: | MCL_coexpression_mm9:0 |
| Association with transcript: | -12bp_to_ENSMUST00000143337_5end |
| EntrezGene: | Rnf38 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
