FFCP PHASE1:Mm9::chr2:150493121..150493157,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=109344|HGNC=|MCL_coexpression_id=122|UniProt=|association_with_transcript=-72bp_to_ENSMUST00000145525,NR_040331_5end|description=CAGE_peak_1_at_E130215H24Rik_5end|id=chr2:150493121..150493157,+|ontology_enrichment_celltype=CL:0000988!5.45e-08!32;CL:0002032!5.45e-08!32;CL:0000037!5.45e-08!32;CL:0000566!5.45e-08!32;CL:0000837!5.45e-08!32;CL:0002031!6.40e-08!25;CL:0000838!2.32e-07!12|ontology_enrichment_celltype_v019_2=CL:0002031,7.45e-21,25;CL:0000988,1.27e-17,32;CL:0002032,1.27e-17,32;CL:0000037,1.27e-17,32;CL:0000837,1.27e-17,32;CL:0000553,5.63e-16,6;CL:0000556,5.63e-16,6;CL:0000050,1.33e-13,9;CL:0000838,2.98e-13,12;CL:0000542,4.04e-12,13;CL:0000051,4.04e-12,13;CL:0002320,4.21e-11,46;CL:0000134,4.21e-11,46;CL:0000084,4.74e-11,11;CL:0000827,4.74e-11,11;CL:0000839,4.46e-09,13;CL:0000738,6.35e-09,17;CL:0002087,6.35e-09,17;CL:0000219,6.56e-09,54;CL:0002027,7.30e-09,3;CL:0002006,7.30e-09,3;CL:0002024,7.30e-09,3;CL:0000791,1.50e-07,9;CL:0000789,1.50e-07,9;CL:0002420,1.50e-07,9;CL:0002419,1.50e-07,9;CL:0000790,1.50e-07,9;CL:0000049,1.80e-07,19;CL:0000763,3.59e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.67e-11!48;UBERON:0004177!5.52e-11!29;UBERON:0002405!1.96e-10!70;UBERON:0002390!3.86e-10!45;UBERON:0003061!3.86e-10!45;UBERON:0005057!6.67e-09!51;UBERON:0003408!2.82e-08!24;UBERON:0006562!5.60e-08!24;UBERON:0001557!5.60e-08!24;UBERON:0001042!5.60e-08!24;UBERON:0008814!5.60e-08!24;UBERON:0009145!5.60e-08!24;UBERON:0002370!8.78e-08!23;UBERON:0000974!8.78e-08!23;UBERON:0004807!8.78e-08!23;UBERON:0005058!8.78e-08!23;UBERON:0003351!8.78e-08!23;UBERON:0009113!8.78e-08!23;UBERON:0003295!8.78e-08!23;UBERON:0009722!8.78e-08!23;UBERON:0005562!8.78e-08!23;UBERON:0007690!8.78e-08!23;UBERON:0001007!1.76e-07!128;UBERON:0001555!1.76e-07!128;UBERON:0007026!1.76e-07!128;UBERON:0004119!4.58e-07!130;UBERON:0000925!4.58e-07!130;UBERON:0006595!4.58e-07!130;UBERON:0000072!4.59e-07!27;UBERON:0004921!6.72e-07!126;UBERON:0004185!6.72e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.19e-23,48;UBERON:0002405,8.19e-23,48;UBERON:0002390,2.14e-20,45;UBERON:0003061,2.14e-20,45;UBERON:0004177,4.40e-16,29;UBERON:0005057,4.40e-16,29;UBERON:0000077,9.68e-13,35;UBERON:0002370,3.37e-11,23;UBERON:0000974,3.37e-11,23;UBERON:0004807,3.37e-11,23;UBERON:0005058,3.37e-11,23;UBERON:0003351,3.37e-11,23;UBERON:0009113,3.37e-11,23;UBERON:0003295,3.37e-11,23;UBERON:0009722,3.37e-11,23;UBERON:0005562,3.37e-11,23;UBERON:0007690,3.37e-11,23;UBERON:0002384,4.21e-11,46;UBERON:0006562,1.23e-10,24;UBERON:0003408,1.23e-10,24;UBERON:0001557,1.23e-10,24;UBERON:0001042,1.23e-10,24;UBERON:0008814,1.23e-10,24;UBERON:0009145,1.23e-10,24;UBERON:0000072,3.34e-09,27;UBERON:0003081,3.91e-09,87;UBERON:0001041,8.37e-07,80;UBERON:0003929,9.26e-07,55|phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0,7.10178278928669,0.422366166455,0.468129052643987,0,0.0797721589953364,4.62241970814255,5.42006494997784,2.99798785634096,3.84703008040669,4.89693314689703,4.41647031501533,3.70208970735495,2.97072756258621,0.0850432901510698,1.39007331681239,2.08959831311148,1.43993180514066,0.22940928106717,0.57423196411502,0,0,0.570070258369122,0.504060259519861,0.221730510655305,1.27006134691926,0,0,1.73310971850765,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,7.21465206048266,4.35217285206807,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0.122490799214954,0,0.919218786610021,0,0,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0.253359865475099,0,0.34255163915718,1.03575153458869,0,0,0.304465478312141,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0.883366073841574,0.484875253135222,0,0,0,0,0.599075622529601,0.599902730993408,1.27070227073065,0,0,0.251308704225729,0.173824320192276,0,0,0,0,0.746441823660558,0.758168275301024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0.502670417600539,0,0,0,0.432276099749388,0.398282546508734,0,0,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0.147610147979602,0.470996183524124,0.370191491765402,0,1.00107063429656,0.393117990226406,1.12431056192427,0.202860121388503,0.72353147925725,1.2731292589071,0,0.486405680325106,0.549122826376163,0,0.744281895337007,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0,0.289298117163023,0,0,0,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,1.70870880797853,0.206386867963223,0.555583582109135,1.31857919903284,1.50363650493128,2.51655990527175,0.339956859987711,0.419854356970974,0.967399816630967,3.81868247206045,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0.539457385539283,0.330613822901344,0.523511883968059,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0.314578033277133,0,0,0.948033361884535,0,0.410843828659309,0.25984164595559,1.07416017400489,0.993406773906324,2.64429988943931,2.36303243479324,1.81739609906666,2.28620419965,1.91569751759997,1.94915761479505,2.21287235772758,4.09069157635491,0.226730383615211,0,0,0,0,0,0,0.214368379079066,1.00314420807073,0,0,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0.419226325255965,0,0,0,0,0,0,0.377252682772152,0.0936415074698824,0.192075457214608,0.0574354689556133,0.476293691283074,0.231768651889711,0,0.412085900803307,0,0,0,0.715308569841963,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0.237270036248348,0.0985044823755635,0,0,0.385813221962283,0,0,0,0,0.220591419119515,0|short_description=p1@E130215H24Rik}} | ||
|EntrezGene=109344 | |||
|HGNC= | |||
|MCL_coexpression_id=122 | |||
|UniProt= | |||
|association_with_transcript=-72bp_to_ENSMUST00000145525,NR_040331_5end | |||
|description=CAGE_peak_1_at_E130215H24Rik_5end | |||
|id=chr2:150493121..150493157,+ | |||
|ontology_enrichment_celltype=CL:0000988!5.45e-08!32;CL:0002032!5.45e-08!32;CL:0000037!5.45e-08!32;CL:0000566!5.45e-08!32;CL:0000837!5.45e-08!32;CL:0002031!6.40e-08!25;CL:0000838!2.32e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,7.45e-21,25;CL:0000988,1.27e-17,32;CL:0002032,1.27e-17,32;CL:0000037,1.27e-17,32;CL:0000837,1.27e-17,32;CL:0000553,5.63e-16,6;CL:0000556,5.63e-16,6;CL:0000050,1.33e-13,9;CL:0000838,2.98e-13,12;CL:0000542,4.04e-12,13;CL:0000051,4.04e-12,13;CL:0002320,4.21e-11,46;CL:0000134,4.21e-11,46;CL:0000084,4.74e-11,11;CL:0000827,4.74e-11,11;CL:0000839,4.46e-09,13;CL:0000738,6.35e-09,17;CL:0002087,6.35e-09,17;CL:0000219,6.56e-09,54;CL:0002027,7.30e-09,3;CL:0002006,7.30e-09,3;CL:0002024,7.30e-09,3;CL:0000791,1.50e-07,9;CL:0000789,1.50e-07,9;CL:0002420,1.50e-07,9;CL:0002419,1.50e-07,9;CL:0000790,1.50e-07,9;CL:0000049,1.80e-07,19;CL:0000763,3.59e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.67e-11!48;UBERON:0004177!5.52e-11!29;UBERON:0002405!1.96e-10!70;UBERON:0002390!3.86e-10!45;UBERON:0003061!3.86e-10!45;UBERON:0005057!6.67e-09!51;UBERON:0003408!2.82e-08!24;UBERON:0006562!5.60e-08!24;UBERON:0001557!5.60e-08!24;UBERON:0001042!5.60e-08!24;UBERON:0008814!5.60e-08!24;UBERON:0009145!5.60e-08!24;UBERON:0002370!8.78e-08!23;UBERON:0000974!8.78e-08!23;UBERON:0004807!8.78e-08!23;UBERON:0005058!8.78e-08!23;UBERON:0003351!8.78e-08!23;UBERON:0009113!8.78e-08!23;UBERON:0003295!8.78e-08!23;UBERON:0009722!8.78e-08!23;UBERON:0005562!8.78e-08!23;UBERON:0007690!8.78e-08!23;UBERON:0001007!1.76e-07!128;UBERON:0001555!1.76e-07!128;UBERON:0007026!1.76e-07!128;UBERON:0004119!4.58e-07!130;UBERON:0000925!4.58e-07!130;UBERON:0006595!4.58e-07!130;UBERON:0000072!4.59e-07!27;UBERON:0004921!6.72e-07!126;UBERON:0004185!6.72e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.19e-23,48;UBERON:0002405,8.19e-23,48;UBERON:0002390,2.14e-20,45;UBERON:0003061,2.14e-20,45;UBERON:0004177,4.40e-16,29;UBERON:0005057,4.40e-16,29;UBERON:0000077,9.68e-13,35;UBERON:0002370,3.37e-11,23;UBERON:0000974,3.37e-11,23;UBERON:0004807,3.37e-11,23;UBERON:0005058,3.37e-11,23;UBERON:0003351,3.37e-11,23;UBERON:0009113,3.37e-11,23;UBERON:0003295,3.37e-11,23;UBERON:0009722,3.37e-11,23;UBERON:0005562,3.37e-11,23;UBERON:0007690,3.37e-11,23;UBERON:0002384,4.21e-11,46;UBERON:0006562,1.23e-10,24;UBERON:0003408,1.23e-10,24;UBERON:0001557,1.23e-10,24;UBERON:0001042,1.23e-10,24;UBERON:0008814,1.23e-10,24;UBERON:0009145,1.23e-10,24;UBERON:0000072,3.34e-09,27;UBERON:0003081,3.91e-09,87;UBERON:0001041,8.37e-07,80;UBERON:0003929,9.26e-07,55 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0,7.10178278928669,0.422366166455,0.468129052643987,0,0.0797721589953364,4.62241970814255,5.42006494997784,2.99798785634096,3.84703008040669,4.89693314689703,4.41647031501533,3.70208970735495,2.97072756258621,0.0850432901510698,1.39007331681239,2.08959831311148,1.43993180514066,0.22940928106717,0.57423196411502,0,0,0.570070258369122,0.504060259519861,0.221730510655305,1.27006134691926,0,0,1.73310971850765,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,7.21465206048266,4.35217285206807,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0.122490799214954,0,0.919218786610021,0,0,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0.253359865475099,0,0.34255163915718,1.03575153458869,0,0,0.304465478312141,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0.883366073841574,0.484875253135222,0,0,0,0,0.599075622529601,0.599902730993408,1.27070227073065,0,0,0.251308704225729,0.173824320192276,0,0,0,0,0.746441823660558,0.758168275301024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0.502670417600539,0,0,0,0.432276099749388,0.398282546508734,0,0,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0.147610147979602,0.470996183524124,0.370191491765402,0,1.00107063429656,0.393117990226406,1.12431056192427,0.202860121388503,0.72353147925725,1.2731292589071,0,0.486405680325106,0.549122826376163,0,0.744281895337007,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0,0.289298117163023,0,0,0,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,1.70870880797853,0.206386867963223,0.555583582109135,1.31857919903284,1.50363650493128,2.51655990527175,0.339956859987711,0.419854356970974,0.967399816630967,3.81868247206045,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0.539457385539283,0.330613822901344,0.523511883968059,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0.314578033277133,0,0,0.948033361884535,0,0.410843828659309,0.25984164595559,1.07416017400489,0.993406773906324,2.64429988943931,2.36303243479324,1.81739609906666,2.28620419965,1.91569751759997,1.94915761479505,2.21287235772758,4.09069157635491,0.226730383615211,0,0,0,0,0,0,0.214368379079066,1.00314420807073,0,0,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0.419226325255965,0,0,0,0,0,0,0.377252682772152,0.0936415074698824,0.192075457214608,0.0574354689556133,0.476293691283074,0.231768651889711,0,0.412085900803307,0,0,0,0.715308569841963,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0.237270036248348,0.0985044823755635,0,0,0.385813221962283,0,0,0,0,0.220591419119515,0 | |||
|short_description=p1@E130215H24Rik | |||
}} |
Revision as of 22:23, 13 September 2013
Short description: | p1@E130215H24Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_E130215H24Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:122 |
Association with transcript: | -72bp_to_ENSMUST00000145525, NR_040331_5end |
EntrezGene: | E130215H24Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.19e-23 | 48 |
immune system | 8.19e-23 | 48 |
hematopoietic system | 2.14e-20 | 45 |
blood island | 2.14e-20 | 45 |
hemopoietic organ | 4.40e-16 | 29 |
immune organ | 4.40e-16 | 29 |
mixed endoderm/mesoderm-derived structure | 9.68e-13 | 35 |
thymus | 3.37e-11 | 23 |
neck | 3.37e-11 | 23 |
respiratory system epithelium | 3.37e-11 | 23 |
hemolymphoid system gland | 3.37e-11 | 23 |
pharyngeal epithelium | 3.37e-11 | 23 |
thymic region | 3.37e-11 | 23 |
pharyngeal gland | 3.37e-11 | 23 |
entire pharyngeal arch endoderm | 3.37e-11 | 23 |
thymus primordium | 3.37e-11 | 23 |
early pharyngeal endoderm | 3.37e-11 | 23 |
connective tissue | 4.21e-11 | 46 |
pharynx | 1.23e-10 | 24 |
gland of gut | 1.23e-10 | 24 |
upper respiratory tract | 1.23e-10 | 24 |
chordate pharynx | 1.23e-10 | 24 |
pharyngeal arch system | 1.23e-10 | 24 |
pharyngeal region of foregut | 1.23e-10 | 24 |
segment of respiratory tract | 3.34e-09 | 27 |
lateral plate mesoderm | 3.91e-09 | 87 |
foregut | 8.37e-07 | 80 |
gut epithelium | 9.26e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.