FFCP PHASE1:Mm9::chr11:107595257..107595285,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=393|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:107595257..107595285,-|id=chr11:107595257..107595285,-|ontology_enrichment_celltype=CL:0000117!9.64e-16!23;CL:0000337!9.64e-16!23;CL:0000540!2.79e-14!33;CL:0000047!2.79e-14!33;CL:0000031!2.79e-14!33;CL:0000404!2.79e-14!33;CL:0002319!2.47e-10!43;CL:0000393!9.33e-10!39;CL:0000211!9.33e-10!39;CL:0000221!9.49e-10!44;CL:0000133!9.49e-10!44;CL:0000055!7.25e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,7.59e-25,23;CL:0000337,7.59e-25,23;CL:0000540,2.43e-16,33;CL:0000047,2.43e-16,33;CL:0000031,2.43e-16,33;CL:0000404,2.43e-16,33;CL:0002319,6.37e-13,43;CL:0000393,1.40e-12,39;CL:0000211,1.40e-12,39;CL:0000221,1.95e-12,44;CL:0000133,1.95e-12,44;CL:0002609,5.73e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.02e-26!71;UBERON:0003075!3.02e-26!71;UBERON:0007284!3.02e-26!71;UBERON:0001017!7.63e-25!73;UBERON:0005743!7.63e-25!73;UBERON:0000073!8.29e-24!75;UBERON:0001016!8.29e-24!75;UBERON:0004121!1.02e-23!102;UBERON:0000924!1.02e-23!102;UBERON:0006601!1.02e-23!102;UBERON:0003056!1.15e-22!49;UBERON:0001049!4.64e-21!52;UBERON:0005068!4.64e-21!52;UBERON:0006241!4.64e-21!52;UBERON:0007135!4.64e-21!52;UBERON:0000033!1.95e-20!63;UBERON:0000955!3.82e-19!50;UBERON:0006238!3.82e-19!50;UBERON:0002616!1.11e-18!49;UBERON:0003080!3.62e-18!40;UBERON:0002780!7.03e-18!39;UBERON:0001890!7.03e-18!39;UBERON:0006240!7.03e-18!39;UBERON:0002020!2.53e-17!34;UBERON:0000153!5.33e-14!94;UBERON:0002791!7.24e-14!29;UBERON:0003528!7.24e-14!29;UBERON:0001893!7.24e-14!29;UBERON:0007811!9.55e-14!86;UBERON:0000956!3.81e-09!21;UBERON:0001869!3.81e-09!21;UBERON:0000203!3.81e-09!21;UBERON:0002619!2.00e-07!17;UBERON:0000468!5.23e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.42e-31,64;UBERON:0003075,1.42e-31,64;UBERON:0007284,1.42e-31,64;UBERON:0003056,1.20e-30,49;UBERON:0000073,2.26e-28,54;UBERON:0001017,2.32e-28,73;UBERON:0001016,3.60e-27,75;UBERON:0004121,4.36e-27,95;UBERON:0000924,4.36e-27,95;UBERON:0006601,4.36e-27,95;UBERON:0001049,1.52e-26,52;UBERON:0005068,1.52e-26,52;UBERON:0006241,1.52e-26,52;UBERON:0007135,1.52e-26,52;UBERON:0010371,9.93e-26,73;UBERON:0003080,3.18e-25,40;UBERON:0002780,9.63e-25,39;UBERON:0001890,9.63e-25,39;UBERON:0006240,9.63e-25,39;UBERON:0002020,1.58e-24,34;UBERON:0000955,3.76e-21,47;UBERON:0006238,3.76e-21,47;UBERON:0002616,1.89e-20,46;UBERON:0010314,4.39e-20,92;UBERON:0003528,5.30e-19,29;UBERON:0002791,5.30e-19,29;UBERON:0001893,5.30e-19,29;UBERON:0000956,1.58e-11,21;UBERON:0001869,1.58e-11,21;UBERON:0000203,1.58e-11,21;UBERON:0002619,3.02e-09,17;UBERON:0002420,4.06e-09,8;UBERON:0007245,4.06e-09,8;UBERON:0010009,4.06e-09,8;UBERON:0010011,4.06e-09,8;UBERON:0000454,4.06e-09,8;UBERON:0002021,6.20e-08,10;UBERON:0000411,6.20e-08,10;UBERON:0001950,6.20e-08,10;UBERON:0002240,1.16e-07,6;UBERON:0005174,1.16e-07,6;UBERON:0001137,1.16e-07,6;UBERON:0000369,1.38e-07,5;UBERON:0002435,1.38e-07,5;UBERON:0000204,1.38e-07,5;UBERON:0010082,1.38e-07,5;UBERON:0001948,5.54e-07,5;UBERON:0002315,5.54e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,9.71119012126069,8.46385566835253,6.33831403506179,0,0,0,0,0,1.19840044207362,4.61061966385865,8.19147937236973,8.6403800532282,5.8890989178387,4.28476476605705,3.3130281142742,4.04219637409348,5.84657373211242,3.67687514644008,1.10115880999389,3.70293280447044,4.91540906419979,7.12185953743047,11.0700048758916,14.5855743755893,1.11673199600552,1.12552522006336,2.90316670775939,7.07108605136802,12.1015928679237,7.45597783301202,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.693941307064543,1.21786191324856,0.461230994512117,1.80867168663147,1.05829836422134,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,1.04853447583376,6.40500843946077,16.3350657746724,0.173824320192276,2.30143911597297,2.90903262383384,2.75810147215188,0.712875546952214,0,0,0.210441855886474,4.16385417480652,0.689706313300419,2.34080768746954,9.0422890701429,3.12967896096108,5.25266253167884,3.37326208415024,3.10444044886819,0.646703978798527,0.756424320671277,0.351902248327898,0.43839146485515,1.94633074457919,0.348252166522167,0,1.39323986772945,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0,0.308534225774757,0.465067889500816,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0,0.420579897128254,13.9950272835827,0,0,2.77274725695804,2.78684006232526,0.644337306610467,0.605050573870028,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.569003702859245,2.05647322697512,0,2.03651327845314,0.387904974335251,0,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0.509235257325564,0.234690248288502,0.16750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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=393 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:107595257..107595285,- | |||
|id=chr11:107595257..107595285,- | |||
|ontology_enrichment_celltype=CL:0000117!9.64e-16!23;CL:0000337!9.64e-16!23;CL:0000540!2.79e-14!33;CL:0000047!2.79e-14!33;CL:0000031!2.79e-14!33;CL:0000404!2.79e-14!33;CL:0002319!2.47e-10!43;CL:0000393!9.33e-10!39;CL:0000211!9.33e-10!39;CL:0000221!9.49e-10!44;CL:0000133!9.49e-10!44;CL:0000055!7.25e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.59e-25,23;CL:0000337,7.59e-25,23;CL:0000540,2.43e-16,33;CL:0000047,2.43e-16,33;CL:0000031,2.43e-16,33;CL:0000404,2.43e-16,33;CL:0002319,6.37e-13,43;CL:0000393,1.40e-12,39;CL:0000211,1.40e-12,39;CL:0000221,1.95e-12,44;CL:0000133,1.95e-12,44;CL:0002609,5.73e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.02e-26!71;UBERON:0003075!3.02e-26!71;UBERON:0007284!3.02e-26!71;UBERON:0001017!7.63e-25!73;UBERON:0005743!7.63e-25!73;UBERON:0000073!8.29e-24!75;UBERON:0001016!8.29e-24!75;UBERON:0004121!1.02e-23!102;UBERON:0000924!1.02e-23!102;UBERON:0006601!1.02e-23!102;UBERON:0003056!1.15e-22!49;UBERON:0001049!4.64e-21!52;UBERON:0005068!4.64e-21!52;UBERON:0006241!4.64e-21!52;UBERON:0007135!4.64e-21!52;UBERON:0000033!1.95e-20!63;UBERON:0000955!3.82e-19!50;UBERON:0006238!3.82e-19!50;UBERON:0002616!1.11e-18!49;UBERON:0003080!3.62e-18!40;UBERON:0002780!7.03e-18!39;UBERON:0001890!7.03e-18!39;UBERON:0006240!7.03e-18!39;UBERON:0002020!2.53e-17!34;UBERON:0000153!5.33e-14!94;UBERON:0002791!7.24e-14!29;UBERON:0003528!7.24e-14!29;UBERON:0001893!7.24e-14!29;UBERON:0007811!9.55e-14!86;UBERON:0000956!3.81e-09!21;UBERON:0001869!3.81e-09!21;UBERON:0000203!3.81e-09!21;UBERON:0002619!2.00e-07!17;UBERON:0000468!5.23e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.42e-31,64;UBERON:0003075,1.42e-31,64;UBERON:0007284,1.42e-31,64;UBERON:0003056,1.20e-30,49;UBERON:0000073,2.26e-28,54;UBERON:0001017,2.32e-28,73;UBERON:0001016,3.60e-27,75;UBERON:0004121,4.36e-27,95;UBERON:0000924,4.36e-27,95;UBERON:0006601,4.36e-27,95;UBERON:0001049,1.52e-26,52;UBERON:0005068,1.52e-26,52;UBERON:0006241,1.52e-26,52;UBERON:0007135,1.52e-26,52;UBERON:0010371,9.93e-26,73;UBERON:0003080,3.18e-25,40;UBERON:0002780,9.63e-25,39;UBERON:0001890,9.63e-25,39;UBERON:0006240,9.63e-25,39;UBERON:0002020,1.58e-24,34;UBERON:0000955,3.76e-21,47;UBERON:0006238,3.76e-21,47;UBERON:0002616,1.89e-20,46;UBERON:0010314,4.39e-20,92;UBERON:0003528,5.30e-19,29;UBERON:0002791,5.30e-19,29;UBERON:0001893,5.30e-19,29;UBERON:0000956,1.58e-11,21;UBERON:0001869,1.58e-11,21;UBERON:0000203,1.58e-11,21;UBERON:0002619,3.02e-09,17;UBERON:0002420,4.06e-09,8;UBERON:0007245,4.06e-09,8;UBERON:0010009,4.06e-09,8;UBERON:0010011,4.06e-09,8;UBERON:0000454,4.06e-09,8;UBERON:0002021,6.20e-08,10;UBERON:0000411,6.20e-08,10;UBERON:0001950,6.20e-08,10;UBERON:0002240,1.16e-07,6;UBERON:0005174,1.16e-07,6;UBERON:0001137,1.16e-07,6;UBERON:0000369,1.38e-07,5;UBERON:0002435,1.38e-07,5;UBERON:0000204,1.38e-07,5;UBERON:0010082,1.38e-07,5;UBERON:0001948,5.54e-07,5;UBERON:0002315,5.54e-07,5 | |||
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|short_description=p@chr11:107595257..107595285,- | |||
}} |
Revision as of 18:36, 12 September 2013
Short description: | p@chr11:107595257..107595285, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:107595257..107595285, - |
Coexpression cluster: | MCL_coexpression_mm9:393 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.59e-25 | 23 |
neuroblast (sensu Vertebrata) | 7.59e-25 | 23 |
neuron | 2.43e-16 | 33 |
neuronal stem cell | 2.43e-16 | 33 |
neuroblast | 2.43e-16 | 33 |
electrically signaling cell | 2.43e-16 | 33 |
neural cell | 6.37e-13 | 43 |
electrically responsive cell | 1.40e-12 | 39 |
electrically active cell | 1.40e-12 | 39 |
ectodermal cell | 1.95e-12 | 44 |
neurectodermal cell | 1.95e-12 | 44 |
neuron of cerebral cortex | 5.73e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.