FFCP PHASE1:Mm9::chr14:19071567..19071612,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=353187|HGNC=|UniProt=Q4VAB7,Q60674,Q8C598,Q8C6J1|association_with_transcript=7bp_to_NM_011584,uc007shp.2,uc007shq.2_5end|description=CAGE_peak_2_at_Nr1d2_5end|id=chr14:19071567..19071612,-|ontology_enrichment_celltype=CL:0000066!8.27e-10!25;CL:0000223!6.78e-08!20|ontology_enrichment_celltype_v019_2=CL:0000066,7.27e-10,25;CL:0000223,6.14e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.97e-11!51;UBERON:0000344!1.10e-07!15;UBERON:0001242!9.64e-07!13;UBERON:0000060!9.64e-07!13;UBERON:0001262!9.64e-07!13;UBERON:0004786!9.64e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.45e-11,51;UBERON:0000344,9.99e-08,15;UBERON:0001242,8.89e-07,13;UBERON:0001262,8.89e-07,13;UBERON:0004786,8.89e-07,13|phase1_expression=3.52327463630547,18.4956966048861,34.5799421936047,21.4749590027849,32.5582224465126,10.9121526742728,7.70921713965235,6.06879620175408,6.75785866328,5.14941957908386,5.47897498321616,4.54701306273417,4.10881751834894,4.80812213304486,2.99798785634096,0.809901069559304,0.699561878128147,3.62781490161973,3.01651753932625,0.84877930359606,4.33720779770456,0.794327609607082,1.30599894569468,7.51964387129011,8.02932483735095,13.2073351746455,16.3689558540448,9.48073423817912,10.8313349090133,13.1055667475164,4.43461021310609,3.17515336729816,3.69038872550742,0,6.35473563452804,2.65975432573588,6.32925004413344,0.837063261473815,0,0,0,0,0.485510353031154,5.5394599909254,5.77848507951233,4.03802854755699,1.56478268869608,0.65407546914134,1.5378032791413,2.72201858703997,1.53985063787899,0,4.86569557567435,10.8804321301702,6.04968838456435,1.80081605225163,4.58453503902011,1.03134418455488,0.202316460859598,0,0.633831403506179,1.0165335962074,0.889294796111139,2.2497492932035,0.988866362566974,2.8419204597844,0.898800331555214,3.45796474789399,1.45165457231869,1.08004750665353,0.841299845405528,2.57085885963423,2.42955395046775,0.489963196859816,0.862609239164127,0,9.91042928994498,8.42736431362239,10.2916377281683,0.263772575460388,0.457438218012048,1.04182674111352,6.70039197603314,5.06486349028512,7.48711414106369,2.06240009831567,2.42031857358475,0.745597783301202,3.7863096666592,2.94729084416464,11.3047150593654,1.72084775396277,15.6393406752783,8.09554787456726,7.14754059192436,11.2006721774334,9.97155382935438,4.77204903218562,2.33807404142582,1.41335829804136,5.7745802108439,1.28326477414318,17.8363667794652,21.3320010945999,3.46385665617943,3.80039798212648,2.52762222507392,10.0481814152773,3.88406825470758,7.12522267511159,1.38788261412909,2.43572382649713,1.15307748628029,2.41156224884196,4.11560474974967,7.53999547978053,1.97755974187499,8.09756398751505,2.65383165584962,3.72063754879041,3.75430581382669,2.90925151881133,1.86391761218122,6.14839673724249,6.91174132484402,9.96282515313506,2.87556298814209,5.39912457894067,2.79554499560742,7.04016005202667,5.49000723382352,2.63874139437015,6.60532416730651,6.39288643325826,5.61027720310812,5.02947915510049,3.1570202793598,2.36373244159177,5.05445516867349,5.47148825304832,1.30120442962704,2.29902104433473,1.98068342785884,2.41127708537144,4.08218994907967,3.97152532883034,6.74652416830048,6.20888089773638,0.431135985865684,0,0.527853372491847,1.31517439456545,0.834141747676794,0.696504333044333,0.61734640922383,0.796137067273973,3.51106593656617,1.80143534980301,1.98914449576915,1.86413195281952,0.703578179943289,1.98068267607116,2.13070262026689,1.57411385397923,1.85120535464854,3.0229412817553,1.87791380979733,4.32031766758527,3.78487654801005,4.10418660197738,6.89084881139774,6.57899943413995,1.09775057645525,2.01309628140558,7.36014819974445,1.02904612379284,4.95628174475697,5.02456076660734,0.639864751605702,1.85789337488351,0.644337306610467,1.61346819698674,0.667134131534611,0.951128130562796,12.3377556001573,1.15289268306808,2.76468729680296,2.78539060857611,3.8992817423824,8.98819408654222,5.61958929674205,2.98711909881551,0.948339504765408,1.02823661348756,1.1270773567308,0.814605311381257,0.969762435838129,2.73529697572242,3.79419222745544,6.4948465111025,4.55296310739987,1.35736880313981,7.70776830426587,0.333690211432188,0.393117990226406,0.224862112384854,0.202860121388503,0.241177159752417,0.50925170356284,0.863088412352432,5.83686816390127,1.09824565275233,7.18841032636773,8.18710084870708,2.80833905803104,3.78868316920668,2.33216637578486,3.85954817090694,12.1937105509959,1.32643988239339,1.30371981153621,1.01847051465113,0.704070744865506,1.17254380209271,1.6663054862021,2.73187107000918,3.78324345854858,5.09368786192182,7.17546458958692,10.3233888270915,2.41758974612254,3.03763023021174,6.03165135757089,4.35124547054968,1.96705709207614,7.17435540392304,4.65596710964597,4.68846746368813,2.45902418065013,4.03953483526997,4.41711507182759,3.90438744296638,3.66219776145758,4.06246956519338,4.23317480756549,2.83076530788832,1.61924280669958,3.21481443702443,3.16230222357219,5.46246237917072,6.95506417520516,0.890328018336276,3.09485222771795,9.733237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| ||
|EntrezGene=353187 | |||
|HGNC= | |||
|UniProt=Q4VAB7,Q60674,Q8C598,Q8C6J1 | |||
|association_with_transcript=7bp_to_NM_011584,uc007shp.2,uc007shq.2_5end | |||
|description=CAGE_peak_2_at_Nr1d2_5end | |||
|id=chr14:19071567..19071612,- | |||
|ontology_enrichment_celltype=CL:0000066!8.27e-10!25;CL:0000223!6.78e-08!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.27e-10,25;CL:0000223,6.14e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.97e-11!51;UBERON:0000344!1.10e-07!15;UBERON:0001242!9.64e-07!13;UBERON:0000060!9.64e-07!13;UBERON:0001262!9.64e-07!13;UBERON:0004786!9.64e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.45e-11,51;UBERON:0000344,9.99e-08,15;UBERON:0001242,8.89e-07,13;UBERON:0001262,8.89e-07,13;UBERON:0004786,8.89e-07,13 | |||
|phase1_expression=3.52327463630547,18.4956966048861,34.5799421936047,21.4749590027849,32.5582224465126,10.9121526742728,7.70921713965235,6.06879620175408,6.75785866328,5.14941957908386,5.47897498321616,4.54701306273417,4.10881751834894,4.80812213304486,2.99798785634096,0.809901069559304,0.699561878128147,3.62781490161973,3.01651753932625,0.84877930359606,4.33720779770456,0.794327609607082,1.30599894569468,7.51964387129011,8.02932483735095,13.2073351746455,16.3689558540448,9.48073423817912,10.8313349090133,13.1055667475164,4.43461021310609,3.17515336729816,3.69038872550742,0,6.35473563452804,2.65975432573588,6.32925004413344,0.837063261473815,0,0,0,0,0.485510353031154,5.5394599909254,5.77848507951233,4.03802854755699,1.56478268869608,0.65407546914134,1.5378032791413,2.72201858703997,1.53985063787899,0,4.86569557567435,10.8804321301702,6.04968838456435,1.80081605225163,4.58453503902011,1.03134418455488,0.202316460859598,0,0.633831403506179,1.0165335962074,0.889294796111139,2.2497492932035,0.988866362566974,2.8419204597844,0.898800331555214,3.45796474789399,1.45165457231869,1.08004750665353,0.841299845405528,2.57085885963423,2.42955395046775,0.489963196859816,0.862609239164127,0,9.91042928994498,8.42736431362239,10.2916377281683,0.263772575460388,0.457438218012048,1.04182674111352,6.70039197603314,5.06486349028512,7.48711414106369,2.06240009831567,2.42031857358475,0.745597783301202,3.7863096666592,2.94729084416464,11.3047150593654,1.72084775396277,15.6393406752783,8.09554787456726,7.14754059192436,11.2006721774334,9.97155382935438,4.77204903218562,2.33807404142582,1.41335829804136,5.7745802108439,1.28326477414318,17.8363667794652,21.3320010945999,3.46385665617943,3.80039798212648,2.52762222507392,10.0481814152773,3.88406825470758,7.12522267511159,1.38788261412909,2.43572382649713,1.15307748628029,2.41156224884196,4.11560474974967,7.53999547978053,1.97755974187499,8.09756398751505,2.65383165584962,3.72063754879041,3.75430581382669,2.90925151881133,1.86391761218122,6.14839673724249,6.91174132484402,9.96282515313506,2.87556298814209,5.39912457894067,2.79554499560742,7.04016005202667,5.49000723382352,2.63874139437015,6.60532416730651,6.39288643325826,5.61027720310812,5.02947915510049,3.1570202793598,2.36373244159177,5.05445516867349,5.47148825304832,1.30120442962704,2.29902104433473,1.98068342785884,2.41127708537144,4.08218994907967,3.97152532883034,6.74652416830048,6.20888089773638,0.431135985865684,0,0.527853372491847,1.31517439456545,0.834141747676794,0.696504333044333,0.61734640922383,0.796137067273973,3.51106593656617,1.80143534980301,1.98914449576915,1.86413195281952,0.703578179943289,1.98068267607116,2.13070262026689,1.57411385397923,1.85120535464854,3.0229412817553,1.87791380979733,4.32031766758527,3.78487654801005,4.10418660197738,6.89084881139774,6.57899943413995,1.09775057645525,2.01309628140558,7.36014819974445,1.02904612379284,4.95628174475697,5.02456076660734,0.639864751605702,1.85789337488351,0.644337306610467,1.61346819698674,0.667134131534611,0.951128130562796,12.3377556001573,1.15289268306808,2.76468729680296,2.78539060857611,3.8992817423824,8.98819408654222,5.61958929674205,2.98711909881551,0.948339504765408,1.02823661348756,1.1270773567308,0.814605311381257,0.969762435838129,2.73529697572242,3.79419222745544,6.4948465111025,4.55296310739987,1.35736880313981,7.70776830426587,0.333690211432188,0.393117990226406,0.224862112384854,0.202860121388503,0.241177159752417,0.50925170356284,0.863088412352432,5.83686816390127,1.09824565275233,7.18841032636773,8.18710084870708,2.80833905803104,3.78868316920668,2.33216637578486,3.85954817090694,12.1937105509959,1.32643988239339,1.30371981153621,1.01847051465113,0.704070744865506,1.17254380209271,1.6663054862021,2.73187107000918,3.78324345854858,5.09368786192182,7.17546458958692,10.3233888270915,2.41758974612254,3.03763023021174,6.03165135757089,4.35124547054968,1.96705709207614,7.17435540392304,4.65596710964597,4.68846746368813,2.45902418065013,4.03953483526997,4.41711507182759,3.90438744296638,3.66219776145758,4.06246956519338,4.23317480756549,2.83076530788832,1.61924280669958,3.21481443702443,3.16230222357219,5.46246237917072,6.95506417520516,0.890328018336276,3.09485222771795,9.73323725537959,5.30980553359851,0.242780636154981,1.81394134178851,1.32023555829129,2.36241514304618,2.15204603560749,1.55056975900933,3.99887102425256,4.27796854061666,4.74055136903724,1.05418608574999,2.06271086496374,7.14923172082955,0.720244376125241,0.646793418913773,1.50035924522115,3.3694644392032,3.21063871683727,2.63278432963394,3.65357938937519,2.58138878870081,1.0591603543191,3.96951116498931,7.25499512942512,4.03661066739764,2.53314284698255,3.81991500810037,1.47726809770555,3.20628920292836,6.86073617438886,1.36696704638282,0.82554747185289,0.555583582109135,1.31857919903284,0.956859594047176,1.60144721244566,7.81900777971734,6.57771825921193,6.63359874261234,4.77335309007557,1.10717597753397,2.43983360552218,0.972048067396211,2.29997125615916,2.83871332870031,3.641337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| |||
|short_description=p2@Nr1d2 | |||
}} | |||
Revision as of 01:43, 13 September 2013
| Short description: | p2@Nr1d2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Nr1d2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 7bp_to_NM_011584, uc007shp.2, uc007shq.2_5end |
| EntrezGene: | Nr1d2 |
| Link to Zenbu: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 7.27e-10 | 25 |
| endodermal cell | 6.14e-08 | 20 |
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 4.45e-11 | 51 |
| mucosa | 9.99e-08 | 15 |
| intestinal mucosa | 8.89e-07 | 13 |
| wall of intestine | 8.89e-07 | 13 |
| gastrointestinal system mucosa | 8.89e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
