FFCP PHASE1:Mm9::chr1:192803159..192803181,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=226841|HGNC=|MCL_coexpression_id=1164|UniProt=Q8C5G2|association_with_transcript=0bp_to_ENSMUST00000166139,NR_027352,uc007ebs.2_5end|description=CAGE_peak_3_at_Vash2_5end|id=chr1:192803159..192803181,-|ontology_enrichment_celltype=CL:0000540!1.53e-07!33;CL:0000047!1.53e-07!33;CL:0000031!1.53e-07!33;CL:0000404!1.53e-07!33;CL:0000117!6.59e-07!23;CL:0000337!6.59e-07!23|ontology_enrichment_celltype_v019_2=CL:0000540,4.52e-08,33;CL:0000047,4.52e-08,33;CL:0000031,4.52e-08,33;CL:0000404,4.52e-08,33;CL:0000117,2.63e-07,23;CL:0000337,2.63e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=8.32774004944929,0,0,0,0,1.17515490338323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.510259740906419,0.397163804803541,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,1.21652317463417,0.367093504323363,2.34717403304412,0.218025156380447,0,0,1.67983705950435,0,0,0,0,0.514518872071894,0.286533439938757,0,8.09265843438391,8.46385566835253,8.87363964908651,0.677689064138264,1.77858959222228,0,0,0,0.299600110518405,0.384218305321555,4.87341177849845,7.42532660824299,5.8890989178387,3.99911378165325,2.20868540951614,7.4719387521122,6.61333750025831,4.5960939330501,1.10115880999389,1.14918604276669,0.307213066512487,10.1552441552249,8.14240028061446,4.68822033501084,0.558365998002762,1.12552522006336,0,5.00868595305235,4.12877874317399,11.3703661953433,0,0.226714680320357,0,0,0,0,0,0,0,1.53387290320252,0.779358013808606,1.06001872353102,2.39433813620357,2.56652954828636,0,0,0,0,0,0.34255163915718,0.258937883647172,0,3.29622120855658,2.13125834818499,0.230615497256059,1.05505848386836,1.64624189989987,0.251333182659351,0.247194967734374,0.144599356919912,0,5.17653919831709,0.441683036920787,1.45462575940567,0,0,0,0,0.11981512450592,0,0.254140454146129,0.449371918214468,0,5.90575454930463,0.347648640384553,0.255715457330331,0.41557608911912,0.324482526135515,6.92507674182151,1.24406970610093,1.0108910337347,0,4.68433594665733,2.75882525320168,7.92273371143537,4.06903008156431,5.8511389270142,3.58718416797579,3.18585863503078,1.29351685369508,8.40715172438085,10.4008344092301,10.5570674498369,9.86380795924087,6.67313398141435,2.43776516565517,3.70407845534298,6.17006227137329,0,0,0,6.00664740352955,5.8631514995274,5.22179978236943,6.8655973319711,5.1158700254325,4.47374627373397,3.25547522650571,6.17028823219124,4.78737903705395,2.63295759861569,2.95501435342371,0.405344047729279,0.292399974850665,0.219550115291051,0.268412837520744,0,5.55684906848136,0,0,8.95810652247983,7.89604684325491,3.73715637834071,3.02525286935014,1.55664630691409,0.760902504450237,0,1.31759163779209,1.00534083520108,1.1937388322469,0.974820435595601,0,0.216138049874694,0.199141273254367,8.15571974098251,4.79843752960861,5.63538678365402,4.68398054044223,1.93952487167626,3.64706263429657,1.83385957660346,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,1.50160595144485,0.982794975566015,0,0.405720242777006,0,0.25462585178142,0.287696137450811,0.486405680325106,0.549122826376163,0,0.372140947668503,0,0,0.179397413521912,0,0.184753190166605,7.39016505904891,4.56301934037672,3.39490171550376,1.87752198630802,2.1775813467436,0.714130922658041,0.390267295715598,2.67979744980525,3.98636441367795,2.23236676120482,0.163863314715738,0.518054945597687,0,0,0,0,0,0.642202359951168,0.468846746368813,0.819674726883377,0.504941854408746,2.52406575533005,2.34263246577983,1.29254038639679,1.43381278771531,1.55959071857676,1.13230612315533,2.83367491172426,1.75353514746787,1.97643888973262,0.642642632843614,0.709700426041343,5.34196811001766,7.81857404897165,1.97964147567043,0,4.61283208694465,3.02323556964751,0.754420319023592,3.83892460745005,0.307435147943927,1.03371317267288,0.727067458955011,1.42598951353889,0.316036757935816,0,0,0.340439605753788,5.76195500900193,7.63216234318252,8.14480733120051,6.7389288784064,4.10248280484762,2.63278432963394,3.34911444026059,1.64270195644597,0.21183207086382,0,0.16488625294148,3.22928853391811,1.93001359770099,1.3130957840345,0.164140899745061,0,1.11255181206306,0.170870880797853,3.92135049130123,0.925972636848558,0.188368457004691,0,0,0.169978429993855,0.419854356970974,0,0,6.80122386199441,3.65975040828328,2.48412283890143,2.50905955217362,0.655087691238533,1.88810084938749,1.32245529160537,0.26175594198403,0.388844919875379,0,1.12738587736838,6.57872802593507,7.44563207056939,6.61134040369762,4.77891346867605,4.39285926276023,4.5769323071844,2.21347454234715,1.04859344425711,0,0.864090018773596,0.948033361884535,8.10900861160657,4.31386020092274,3.11809975146708,1.9692936523423,0.596044064343795,0.240390899039938,0.886137163047463,0.302899349844443,0.838274873204998,0.100826185136841,0.292373642219257,0.481059208201647,0.467507608726276,0.226730383615211,0.221985953374065,0.448569283047378,0,0.19318959403219,0.563047426353546,1.46521299413812,0.2143683790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| ||
|EntrezGene=226841 | |||
|HGNC= | |||
|MCL_coexpression_id=1164 | |||
|UniProt=Q8C5G2 | |||
|association_with_transcript=0bp_to_ENSMUST00000166139,NR_027352,uc007ebs.2_5end | |||
|description=CAGE_peak_3_at_Vash2_5end | |||
|id=chr1:192803159..192803181,- | |||
|ontology_enrichment_celltype=CL:0000540!1.53e-07!33;CL:0000047!1.53e-07!33;CL:0000031!1.53e-07!33;CL:0000404!1.53e-07!33;CL:0000117!6.59e-07!23;CL:0000337!6.59e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.52e-08,33;CL:0000047,4.52e-08,33;CL:0000031,4.52e-08,33;CL:0000404,4.52e-08,33;CL:0000117,2.63e-07,23;CL:0000337,2.63e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=8.32774004944929,0,0,0,0,1.17515490338323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.510259740906419,0.397163804803541,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,1.21652317463417,0.367093504323363,2.34717403304412,0.218025156380447,0,0,1.67983705950435,0,0,0,0,0.514518872071894,0.286533439938757,0,8.09265843438391,8.46385566835253,8.87363964908651,0.677689064138264,1.77858959222228,0,0,0,0.299600110518405,0.384218305321555,4.87341177849845,7.42532660824299,5.8890989178387,3.99911378165325,2.20868540951614,7.4719387521122,6.61333750025831,4.5960939330501,1.10115880999389,1.14918604276669,0.307213066512487,10.1552441552249,8.14240028061446,4.68822033501084,0.558365998002762,1.12552522006336,0,5.00868595305235,4.12877874317399,11.3703661953433,0,0.226714680320357,0,0,0,0,0,0,0,1.53387290320252,0.779358013808606,1.06001872353102,2.39433813620357,2.56652954828636,0,0,0,0,0,0.34255163915718,0.258937883647172,0,3.29622120855658,2.13125834818499,0.230615497256059,1.05505848386836,1.64624189989987,0.251333182659351,0.247194967734374,0.144599356919912,0,5.17653919831709,0.441683036920787,1.45462575940567,0,0,0,0,0.11981512450592,0,0.254140454146129,0.449371918214468,0,5.90575454930463,0.347648640384553,0.255715457330331,0.41557608911912,0.324482526135515,6.92507674182151,1.24406970610093,1.0108910337347,0,4.68433594665733,2.75882525320168,7.92273371143537,4.06903008156431,5.8511389270142,3.58718416797579,3.18585863503078,1.29351685369508,8.40715172438085,10.4008344092301,10.5570674498369,9.86380795924087,6.67313398141435,2.43776516565517,3.70407845534298,6.17006227137329,0,0,0,6.00664740352955,5.8631514995274,5.22179978236943,6.8655973319711,5.1158700254325,4.47374627373397,3.25547522650571,6.17028823219124,4.78737903705395,2.63295759861569,2.95501435342371,0.405344047729279,0.292399974850665,0.219550115291051,0.268412837520744,0,5.55684906848136,0,0,8.95810652247983,7.89604684325491,3.73715637834071,3.02525286935014,1.55664630691409,0.760902504450237,0,1.31759163779209,1.00534083520108,1.1937388322469,0.974820435595601,0,0.216138049874694,0.199141273254367,8.15571974098251,4.79843752960861,5.63538678365402,4.68398054044223,1.93952487167626,3.64706263429657,1.83385957660346,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,1.50160595144485,0.982794975566015,0,0.405720242777006,0,0.25462585178142,0.287696137450811,0.486405680325106,0.549122826376163,0,0.372140947668503,0,0,0.179397413521912,0,0.184753190166605,7.39016505904891,4.56301934037672,3.39490171550376,1.87752198630802,2.1775813467436,0.714130922658041,0.390267295715598,2.67979744980525,3.98636441367795,2.23236676120482,0.163863314715738,0.518054945597687,0,0,0,0,0,0.642202359951168,0.468846746368813,0.819674726883377,0.504941854408746,2.52406575533005,2.34263246577983,1.29254038639679,1.43381278771531,1.55959071857676,1.13230612315533,2.83367491172426,1.75353514746787,1.97643888973262,0.642642632843614,0.709700426041343,5.34196811001766,7.81857404897165,1.97964147567043,0,4.61283208694465,3.02323556964751,0.754420319023592,3.83892460745005,0.307435147943927,1.03371317267288,0.727067458955011,1.42598951353889,0.316036757935816,0,0,0.340439605753788,5.76195500900193,7.63216234318252,8.14480733120051,6.7389288784064,4.10248280484762,2.63278432963394,3.34911444026059,1.64270195644597,0.21183207086382,0,0.16488625294148,3.22928853391811,1.93001359770099,1.3130957840345,0.164140899745061,0,1.11255181206306,0.170870880797853,3.92135049130123,0.925972636848558,0.188368457004691,0,0,0.169978429993855,0.419854356970974,0,0,6.80122386199441,3.65975040828328,2.48412283890143,2.50905955217362,0.655087691238533,1.88810084938749,1.32245529160537,0.26175594198403,0.388844919875379,0,1.12738587736838,6.57872802593507,7.44563207056939,6.61134040369762,4.77891346867605,4.39285926276023,4.5769323071844,2.21347454234715,1.04859344425711,0,0.864090018773596,0.948033361884535,8.10900861160657,4.31386020092274,3.11809975146708,1.9692936523423,0.596044064343795,0.240390899039938,0.886137163047463,0.302899349844443,0.838274873204998,0.100826185136841,0.292373642219257,0.481059208201647,0.467507608726276,0.226730383615211,0.221985953374065,0.448569283047378,0,0.19318959403219,0.563047426353546,1.46521299413812,0.214368379079066,0,0,0.920650473014354,0,0,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0,6.33102820263478,6.3843979744165,9.04888110496911,5.34834777550247,5.8691685535835,4.22840069435032,2.22246727801615,5.56294654545014,1.92551525755089,2.27427490587418,3.04175159868288,4.71565853465191,3.09016974650612,3.58540853467268,3.21638626151434,3.33405583898152,3.47652977834566,2.89363830695558,2.06042950401653,3.67997300335993,2.05721551431249,2.48466128623072,2.62279808942053,3.48831399917588,4.42314087952054,2.62305284464197,3.29270351170991,3.6829759601298,3.66671107383827,3.36685362994643,2.84724043498018,3.54616136552028,2.04615521584845,2.78886314134739,3.08650577569826,4.746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| |||
|short_description=p3@Vash2 | |||
}} | |||
Revision as of 20:05, 13 September 2013
| Short description: | p3@Vash2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Vash2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1164 |
| Association with transcript: | 0bp_to_ENSMUST00000166139, NR_027352, uc007ebs.2_5end |
| EntrezGene: | Vash2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuron | 4.52e-08 | 33 |
| neuronal stem cell | 4.52e-08 | 33 |
| neuroblast | 4.52e-08 | 33 |
| electrically signaling cell | 4.52e-08 | 33 |
| CNS neuron (sensu Vertebrata) | 2.63e-07 | 23 |
| neuroblast (sensu Vertebrata) | 2.63e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
