FFCP PHASE1:Mm9::chr5:122286796..122286807,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16923|HGNC=|MCL_coexpression_id=877|UniProt=O09039,D3Z3Y5|association_with_transcript=2bp_to_NM_008507,uc008zkg.1,uc008zkh.1,uc008zki.1_5end|description=CAGE_peak_4_at_Sh2b3_5end|id=chr5:122286796..122286807,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002320,5.85e-07,46;CL:0000134,5.85e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.85e-07,46|phase1_expression=0,1.04692622291808,0.909998478779072,0.90739263392049,1.50268718983904,0.503637815735669,0.934450562382103,0.516493293766305,15.9091256031383,21.5339364216234,0.68487187290202,1.27635454392538,0.342401459862411,0.174840804837995,0.999329285446988,0.809901069559304,0.699561878128147,1.73504190947031,2.33094537129756,3.81950686618227,1.02051948181284,0.198581902401771,0,0.95995453676044,0.22940928106717,1.72269589234506,0.430761996159075,1.07735616342945,0.190023419456374,0.252030129759931,0.443461021310609,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0.408338712524738,1.67412652294763,0.7813353445238,1.57057123192139,1.17646297606203,1.36609096991689,0.971020706062307,0.125896817975577,0.506884656097573,0.367093504323363,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0,0,4.02678254538567,0.725362142011344,0,0.514518872071894,0.286533439938757,0,0,0,0.633831403506179,0.338844532069132,0,0.449949858640699,0.988866362566974,1.4209602298922,0.299600110518405,0,0.207379224616955,0,0.210324961351382,0.285650984403804,0.441737081903227,0.367472397644862,0.191690942036473,0,0,0.255374676170375,0.614426133024974,0.263772575460388,0,0,0,0,0,0.589257170947335,0,0,0.37863096666592,0.151143120213571,2.02905142091174,0,0.679971333707751,0.539703191637817,1.94932925234301,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0.505524445014783,1.25602267690966,3.10725460376606,0.742210695324124,0.173485326766136,0,0.461230994512117,0,0.587943535678524,0,0.247194967734374,0.722996784599558,0,0.161766849947409,0.883366073841574,0.969750506270444,0,0.292780797011547,0.41889341362691,0.255457055208591,0.718890747035522,1.79970819298022,0.508280908292259,0.449371918214468,0,0,0.869121600961382,0.255715457330331,0.20778804455956,0.162241263067758,0.305518091550949,0.870848794270651,0,0.210441855886474,0,0,0.360124259610698,0.150704817835715,0.0680364991513279,0.384341160854549,0.0937017245597288,0.776110112217047,0.862271971731369,0.567318240503458,0.351902248327898,0,0,0.696504333044333,0.61734640922383,0.199034266818493,0,0.772043721344145,0.568326998791185,0.621377317606506,0.234526059981096,0.36012412292203,0.710234206755631,0,0.308534225774757,0.465067889500816,0.268273401399619,0.233530684734339,0.16455984991348,0.164167464079095,0.324275238183423,0.146199987425332,0.439100230582101,0.536825675041487,0,0.205809224758569,0.330418782983798,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0.596869416123452,0,0,0.216138049874694,0,0.569003702859245,0.342745537829186,1.1270773567308,0.610953983535943,0,0.420814919341911,0.442655759869801,0.442830443938806,0.470996183524124,0.123397163921801,0,0.667380422864376,0.589676985339609,0.224862112384854,0.405720242777006,0,0.50925170356284,0.287696137450811,0.486405680325106,0,0,0,0,0.252578877947112,0,0,0.554259570499814,0.37898282354097,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.780534591431195,0.630540576424764,0.664394068946325,0.159454768657487,0.327726629431476,0.518054945597687,0.144649058581512,1.50791283939272,0.54390568381871,0,0.275936746304732,0.321101179975584,0,0,0.252470927204373,0,0.780877488593277,0.861693590931196,0.955875191810208,0.668396022247182,0.566153061577665,2.02405350837447,1.46127928955656,0.790575555893047,0.321321316421807,0.567760340833074,0.178065603667255,0.325773918707152,0,0,0.485561272309963,0,0.188605079755898,0,0.307435147943927,0,0.727067458955011,0.356497378384721,0,0,0,0,0.36012218806262,0,0.428674070063185,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0.23467170806371,0.42366414172764,0,0.32977250588296,0.807322133479528,0.0603129249281559,0,0,0,0.18542530201051,0.854354403989263,0.206386867963223,1.11116716421827,0.565105371014073,0.820165366326151,0.686334519619568,0.509935289981566,1.25956307091292,1.10559979043539,0,0.316335993581135,0.203319467126849,0.216010681643603,0.418176592028937,0,0.269728692769641,0.330613822901344,0.26175594198403,0.129614973291793,0,17.4744810992099,0,0.496375471371293,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.104859344425711,4.83168241652012,8.64090018773596,0.632022241256357,0,0.308132871494482,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0.358855426437903,0.671538465456314,0,0.375364950902364,0,0,0,0,0,0.572895513439397,0.343706364687375,0,0.755393897389701,0,0,0.906284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| ||
|EntrezGene=16923 | |||
|HGNC= | |||
|MCL_coexpression_id=877 | |||
|UniProt=O09039,D3Z3Y5 | |||
|association_with_transcript=2bp_to_NM_008507,uc008zkg.1,uc008zkh.1,uc008zki.1_5end | |||
|description=CAGE_peak_4_at_Sh2b3_5end | |||
|id=chr5:122286796..122286807,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,5.85e-07,46;CL:0000134,5.85e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.85e-07,46 | |||
|phase1_expression=0,1.04692622291808,0.909998478779072,0.90739263392049,1.50268718983904,0.503637815735669,0.934450562382103,0.516493293766305,15.9091256031383,21.5339364216234,0.68487187290202,1.27635454392538,0.342401459862411,0.174840804837995,0.999329285446988,0.809901069559304,0.699561878128147,1.73504190947031,2.33094537129756,3.81950686618227,1.02051948181284,0.198581902401771,0,0.95995453676044,0.22940928106717,1.72269589234506,0.430761996159075,1.07735616342945,0.190023419456374,0.252030129759931,0.443461021310609,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0.408338712524738,1.67412652294763,0.7813353445238,1.57057123192139,1.17646297606203,1.36609096991689,0.971020706062307,0.125896817975577,0.506884656097573,0.367093504323363,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0,0,4.02678254538567,0.725362142011344,0,0.514518872071894,0.286533439938757,0,0,0,0.633831403506179,0.338844532069132,0,0.449949858640699,0.988866362566974,1.4209602298922,0.299600110518405,0,0.207379224616955,0,0.210324961351382,0.285650984403804,0.441737081903227,0.367472397644862,0.191690942036473,0,0,0.255374676170375,0.614426133024974,0.263772575460388,0,0,0,0,0,0.589257170947335,0,0,0.37863096666592,0.151143120213571,2.02905142091174,0,0.679971333707751,0.539703191637817,1.94932925234301,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0.505524445014783,1.25602267690966,3.10725460376606,0.742210695324124,0.173485326766136,0,0.461230994512117,0,0.587943535678524,0,0.247194967734374,0.722996784599558,0,0.161766849947409,0.883366073841574,0.969750506270444,0,0.292780797011547,0.41889341362691,0.255457055208591,0.718890747035522,1.79970819298022,0.508280908292259,0.449371918214468,0,0,0.869121600961382,0.255715457330331,0.20778804455956,0.162241263067758,0.305518091550949,0.870848794270651,0,0.210441855886474,0,0,0.360124259610698,0.150704817835715,0.0680364991513279,0.384341160854549,0.0937017245597288,0.776110112217047,0.862271971731369,0.567318240503458,0.351902248327898,0,0,0.696504333044333,0.61734640922383,0.199034266818493,0,0.772043721344145,0.568326998791185,0.621377317606506,0.234526059981096,0.36012412292203,0.710234206755631,0,0.308534225774757,0.465067889500816,0.268273401399619,0.233530684734339,0.16455984991348,0.164167464079095,0.324275238183423,0.146199987425332,0.439100230582101,0.536825675041487,0,0.205809224758569,0.330418782983798,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0.596869416123452,0,0,0.216138049874694,0,0.569003702859245,0.342745537829186,1.1270773567308,0.610953983535943,0,0.420814919341911,0.442655759869801,0.442830443938806,0.470996183524124,0.123397163921801,0,0.667380422864376,0.589676985339609,0.224862112384854,0.405720242777006,0,0.50925170356284,0.287696137450811,0.486405680325106,0,0,0,0,0.252578877947112,0,0,0.554259570499814,0.37898282354097,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.780534591431195,0.630540576424764,0.664394068946325,0.159454768657487,0.327726629431476,0.518054945597687,0.144649058581512,1.50791283939272,0.54390568381871,0,0.275936746304732,0.321101179975584,0,0,0.252470927204373,0,0.780877488593277,0.861693590931196,0.955875191810208,0.668396022247182,0.566153061577665,2.02405350837447,1.46127928955656,0.790575555893047,0.321321316421807,0.567760340833074,0.178065603667255,0.325773918707152,0,0,0.485561272309963,0,0.188605079755898,0,0.307435147943927,0,0.727067458955011,0.356497378384721,0,0,0,0,0.36012218806262,0,0.428674070063185,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0.23467170806371,0.42366414172764,0,0.32977250588296,0.807322133479528,0.0603129249281559,0,0,0,0.18542530201051,0.854354403989263,0.206386867963223,1.11116716421827,0.565105371014073,0.820165366326151,0.686334519619568,0.509935289981566,1.25956307091292,1.10559979043539,0,0.316335993581135,0.203319467126849,0.216010681643603,0.418176592028937,0,0.269728692769641,0.330613822901344,0.26175594198403,0.129614973291793,0,17.4744810992099,0,0.496375471371293,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.104859344425711,4.83168241652012,8.64090018773596,0.632022241256357,0,0.308132871494482,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0.358855426437903,0.671538465456314,0,0.375364950902364,0,0,0,0,0,0.572895513439397,0.343706364687375,0,0.755393897389701,0,0,0.906284817968409,0,0.103787347584177,0,0,0.486213434136588,0.628839487883947,0.551530525350042,0.44449345560323,0,0,0.252697211763798,0.50695859978048,0.188626341386076,0.37456602987953,0.384150914429216,0.287177344778066,0,0.463537303779422,0.578727661391115,0.412085900803307,0.147198920134397,0,0,0,0.436039249896986,0.470546902076653,0.25384382367503,0,0.526139422875686,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.385813221962283,0.749431733813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| |||
|short_description=p4@Sh2b3 | |||
}} | |||
Revision as of 06:17, 14 September 2013
| Short description: | p4@Sh2b3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Sh2b3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:877 |
| Association with transcript: | 2bp_to_NM_008507, uc008zkg.1, uc008zkh.1, uc008zki.1_5end |
| EntrezGene: | Sh2b3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| connective tissue cell | 5.85e-07 | 46 |
| mesenchymal cell | 5.85e-07 | 46 |
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 5.85e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
