FFCP PHASE1:Mm9::chr13:43711367..43711385,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=328234|HGNC=|MCL_coexpression_id=1342|UniProt=E0CZ87|association_with_transcript=15bp_to_ENSMUST00000161817_5end|description=CAGE_peak_2_at_Rnf182_5end|id=chr13:43711367..43711385,+|ontology_enrichment_celltype=CL:0000221!2.75e-19!44;CL:0000133!2.75e-19!44;CL:0002319!4.29e-19!43;CL:0000540!4.64e-17!33;CL:0000047!4.64e-17!33;CL:0000031!4.64e-17!33;CL:0000404!4.64e-17!33;CL:0000117!2.84e-15!23;CL:0000337!2.84e-15!23;CL:0000055!3.04e-13!50;CL:0000393!1.31e-11!39;CL:0000211!1.31e-11!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.11e-22,23;CL:0000337,1.11e-22,23;CL:0002319,4.09e-22,43;CL:0000540,2.41e-21,33;CL:0000047,2.41e-21,33;CL:0000031,2.41e-21,33;CL:0000404,2.41e-21,33;CL:0000221,2.52e-21,44;CL:0000133,2.52e-21,44;CL:0000393,1.94e-16,39;CL:0000211,1.94e-16,39;CL:0002321,4.26e-09,70;CL:0002609,6.82e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.88e-34!73;UBERON:0005743!2.88e-34!73;UBERON:0000073!2.55e-33!75;UBERON:0001016!2.55e-33!75;UBERON:0004121!2.40e-27!102;UBERON:0000924!2.40e-27!102;UBERON:0006601!2.40e-27!102;UBERON:0001049!1.49e-24!52;UBERON:0005068!1.49e-24!52;UBERON:0006241!1.49e-24!52;UBERON:0007135!1.49e-24!52;UBERON:0000955!1.46e-23!50;UBERON:0006238!1.46e-23!50;UBERON:0002616!7.48e-23!49;UBERON:0000033!1.89e-22!63;UBERON:0002346!2.28e-21!71;UBERON:0003075!2.28e-21!71;UBERON:0007284!2.28e-21!71;UBERON:0002020!4.69e-19!34;UBERON:0003056!1.18e-17!49;UBERON:0003080!2.41e-17!40;UBERON:0002780!1.14e-16!39;UBERON:0001890!1.14e-16!39;UBERON:0006240!1.14e-16!39;UBERON:0002791!5.93e-16!29;UBERON:0003528!5.93e-16!29;UBERON:0001893!5.93e-16!29;UBERON:0000153!6.35e-12!94;UBERON:0000956!3.90e-11!21;UBERON:0001869!3.90e-11!21;UBERON:0000203!3.90e-11!21;UBERON:0007811!1.53e-10!86;UBERON:0002619!1.11e-08!17;UBERON:0003076!7.36e-08!12;UBERON:0003057!7.36e-08!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.17e-39,73;UBERON:0001016,2.79e-37,75;UBERON:0004121,3.52e-32,95;UBERON:0000924,3.52e-32,95;UBERON:0006601,3.52e-32,95;UBERON:0000073,9.35e-32,54;UBERON:0001049,2.05e-29,52;UBERON:0005068,2.05e-29,52;UBERON:0006241,2.05e-29,52;UBERON:0007135,2.05e-29,52;UBERON:0002346,5.39e-28,64;UBERON:0003075,5.39e-28,64;UBERON:0007284,5.39e-28,64;UBERON:0010371,4.39e-25,73;UBERON:0000955,9.53e-25,47;UBERON:0006238,9.53e-25,47;UBERON:0002020,1.11e-24,34;UBERON:0002616,9.47e-24,46;UBERON:0003528,5.21e-20,29;UBERON:0002791,5.21e-20,29;UBERON:0001893,5.21e-20,29;UBERON:0003080,6.36e-20,40;UBERON:0002780,5.91e-19,39;UBERON:0001890,5.91e-19,39;UBERON:0006240,5.91e-19,39;UBERON:0003056,2.08e-18,49;UBERON:0010314,1.88e-14,92;UBERON:0000956,7.78e-13,21;UBERON:0001869,7.78e-13,21;UBERON:0000203,7.78e-13,21;UBERON:0003076,4.67e-10,12;UBERON:0003057,4.67e-10,12;UBERON:0002619,2.84e-09,17;UBERON:0002420,1.39e-08,8;UBERON:0007245,1.39e-08,8;UBERON:0010009,1.39e-08,8;UBERON:0010011,1.39e-08,8;UBERON:0000454,1.39e-08,8;UBERON:0001954,1.30e-07,7;UBERON:0003022,1.30e-07,7;UBERON:0002421,1.30e-07,7;UBERON:0000349,1.30e-07,7;UBERON:0002600,1.30e-07,7;UBERON:0000025,7.87e-07,114;UBERON:0002240,8.86e-07,6;UBERON:0005174,8.86e-07,6;UBERON:0001137,8.86e-07,6|phase1_expression=0.80074423552397,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.30815093828268,1.75748946187577,3.88859798148567,0.839918529752175,1.43752564364972,0,0,0,0,0,0,4.04632921719196,2.11596391708813,2.53532561402472,0.338844532069132,0,0,0,0,1.79760066311043,3.45796474789399,5.39185984004084,4.86021377994086,3.36519938162211,3.14216082844184,2.42955395046775,2.81728838194394,3.64212789869298,1.83843757322004,5.50579404996943,3.95830748064082,3.84016333140609,3.56092976871523,3.93396867490361,3.64639359389732,4.18774498502071,2.25105044012672,3.81995619442025,2.65165726926301,5.12538050876771,3.72798891650601,0.151452386666368,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0.985903938436763,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0,0,0,0.125666591329675,0,1.87979163995885,0,0.161766849947409,0.441683036920787,0.484875253135222,0,23.7152445579353,20.9446706813455,0,0,0,0,3.89455662452539,2.74500361691176,2.51308704225729,2.25971616249959,1.53429274398198,4.77912502486988,3.0825839982874,0.407357455401265,0.870848794270651,0,0.210441855886474,0.910843100738926,0,0.720248519221397,1.05493372485001,0.612328492361951,1.2811372028485,1.03071897015702,2.58703370739016,0.862271971731369,1.32374256117473,1.58356011747554,1.31517439456545,1.66828349535359,1.0447564995665,0.411564272815887,2.18937693500343,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0,0.787056926989615,0.308534225774757,0.465067889500816,0.536546802799238,0.116765342367169,0,0.164167464079095,0,0,0,0,10.5144974282064,20.5809224758569,0,0,0.639864751605702,1.16118335930219,0.38660238396628,0.201683524623343,0.667134131534611,0,0,0.329397909448022,0.251335208800269,0.19895647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| ||
|EntrezGene=328234 | |||
|HGNC= | |||
|MCL_coexpression_id=1342 | |||
|UniProt=E0CZ87 | |||
|association_with_transcript=15bp_to_ENSMUST00000161817_5end | |||
|description=CAGE_peak_2_at_Rnf182_5end | |||
|id=chr13:43711367..43711385,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.75e-19!44;CL:0000133!2.75e-19!44;CL:0002319!4.29e-19!43;CL:0000540!4.64e-17!33;CL:0000047!4.64e-17!33;CL:0000031!4.64e-17!33;CL:0000404!4.64e-17!33;CL:0000117!2.84e-15!23;CL:0000337!2.84e-15!23;CL:0000055!3.04e-13!50;CL:0000393!1.31e-11!39;CL:0000211!1.31e-11!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.11e-22,23;CL:0000337,1.11e-22,23;CL:0002319,4.09e-22,43;CL:0000540,2.41e-21,33;CL:0000047,2.41e-21,33;CL:0000031,2.41e-21,33;CL:0000404,2.41e-21,33;CL:0000221,2.52e-21,44;CL:0000133,2.52e-21,44;CL:0000393,1.94e-16,39;CL:0000211,1.94e-16,39;CL:0002321,4.26e-09,70;CL:0002609,6.82e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.88e-34!73;UBERON:0005743!2.88e-34!73;UBERON:0000073!2.55e-33!75;UBERON:0001016!2.55e-33!75;UBERON:0004121!2.40e-27!102;UBERON:0000924!2.40e-27!102;UBERON:0006601!2.40e-27!102;UBERON:0001049!1.49e-24!52;UBERON:0005068!1.49e-24!52;UBERON:0006241!1.49e-24!52;UBERON:0007135!1.49e-24!52;UBERON:0000955!1.46e-23!50;UBERON:0006238!1.46e-23!50;UBERON:0002616!7.48e-23!49;UBERON:0000033!1.89e-22!63;UBERON:0002346!2.28e-21!71;UBERON:0003075!2.28e-21!71;UBERON:0007284!2.28e-21!71;UBERON:0002020!4.69e-19!34;UBERON:0003056!1.18e-17!49;UBERON:0003080!2.41e-17!40;UBERON:0002780!1.14e-16!39;UBERON:0001890!1.14e-16!39;UBERON:0006240!1.14e-16!39;UBERON:0002791!5.93e-16!29;UBERON:0003528!5.93e-16!29;UBERON:0001893!5.93e-16!29;UBERON:0000153!6.35e-12!94;UBERON:0000956!3.90e-11!21;UBERON:0001869!3.90e-11!21;UBERON:0000203!3.90e-11!21;UBERON:0007811!1.53e-10!86;UBERON:0002619!1.11e-08!17;UBERON:0003076!7.36e-08!12;UBERON:0003057!7.36e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.17e-39,73;UBERON:0001016,2.79e-37,75;UBERON:0004121,3.52e-32,95;UBERON:0000924,3.52e-32,95;UBERON:0006601,3.52e-32,95;UBERON:0000073,9.35e-32,54;UBERON:0001049,2.05e-29,52;UBERON:0005068,2.05e-29,52;UBERON:0006241,2.05e-29,52;UBERON:0007135,2.05e-29,52;UBERON:0002346,5.39e-28,64;UBERON:0003075,5.39e-28,64;UBERON:0007284,5.39e-28,64;UBERON:0010371,4.39e-25,73;UBERON:0000955,9.53e-25,47;UBERON:0006238,9.53e-25,47;UBERON:0002020,1.11e-24,34;UBERON:0002616,9.47e-24,46;UBERON:0003528,5.21e-20,29;UBERON:0002791,5.21e-20,29;UBERON:0001893,5.21e-20,29;UBERON:0003080,6.36e-20,40;UBERON:0002780,5.91e-19,39;UBERON:0001890,5.91e-19,39;UBERON:0006240,5.91e-19,39;UBERON:0003056,2.08e-18,49;UBERON:0010314,1.88e-14,92;UBERON:0000956,7.78e-13,21;UBERON:0001869,7.78e-13,21;UBERON:0000203,7.78e-13,21;UBERON:0003076,4.67e-10,12;UBERON:0003057,4.67e-10,12;UBERON:0002619,2.84e-09,17;UBERON:0002420,1.39e-08,8;UBERON:0007245,1.39e-08,8;UBERON:0010009,1.39e-08,8;UBERON:0010011,1.39e-08,8;UBERON:0000454,1.39e-08,8;UBERON:0001954,1.30e-07,7;UBERON:0003022,1.30e-07,7;UBERON:0002421,1.30e-07,7;UBERON:0000349,1.30e-07,7;UBERON:0002600,1.30e-07,7;UBERON:0000025,7.87e-07,114;UBERON:0002240,8.86e-07,6;UBERON:0005174,8.86e-07,6;UBERON:0001137,8.86e-07,6 | |||
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|short_description=p2@Rnf182 | |||
}} |
Revision as of 00:35, 13 September 2013
Short description: | p2@Rnf182 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rnf182_5end |
Coexpression cluster: | MCL_coexpression_mm9:1342 |
Association with transcript: | 15bp_to_ENSMUST00000161817_5end |
EntrezGene: | Rnf182 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.11e-22 | 23 |
neuroblast (sensu Vertebrata) | 1.11e-22 | 23 |
neural cell | 4.09e-22 | 43 |
neuron | 2.41e-21 | 33 |
neuronal stem cell | 2.41e-21 | 33 |
neuroblast | 2.41e-21 | 33 |
electrically signaling cell | 2.41e-21 | 33 |
ectodermal cell | 2.52e-21 | 44 |
neurectodermal cell | 2.52e-21 | 44 |
electrically responsive cell | 1.94e-16 | 39 |
electrically active cell | 1.94e-16 | 39 |
embryonic cell | 4.26e-09 | 70 |
neuron of cerebral cortex | 6.82e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.