FFCP PHASE1:Mm9::chr5:36873259..36873278,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100855|HGNC=|MCL_coexpression_id=459|UniProt=E9PYB1,Q5U224,Q76LY3,Q8CGA2|association_with_transcript=0bp_to_ENSMUST00000171385,NM_001113364,uc008xer.2,uc008xes.2_5end|description=CAGE_peak_5_at_Tbc1d14_5end|id=chr5:36873259..36873278,-|ontology_enrichment_celltype=CL:0000117!1.02e-12!23;CL:0000337!1.02e-12!23;CL:0000540!1.55e-08!33;CL:0000047!1.55e-08!33;CL:0000031!1.55e-08!33;CL:0000404!1.55e-08!33;CL:0000393!2.33e-08!39;CL:0000211!2.33e-08!39;CL:0000221!5.42e-08!44;CL:0000133!5.42e-08!44;CL:0002319!1.16e-07!43;CL:0000055!3.01e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.38e-24,23;CL:0000337,1.38e-24,23;CL:0002609,1.36e-16,6;CL:0000540,5.33e-16,33;CL:0000047,5.33e-16,33;CL:0000031,5.33e-16,33;CL:0000404,5.33e-16,33;CL:0002319,5.34e-13,43;CL:0000393,5.72e-13,39;CL:0000211,5.72e-13,39;CL:0000221,1.29e-12,44;CL:0000133,1.29e-12,44;CL:0002608,5.42e-09,3;CL:0002612,7.56e-08,3;CL:0002610,1.17e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!2.25e-15!34;UBERON:0001049!2.45e-14!52;UBERON:0005068!2.45e-14!52;UBERON:0006241!2.45e-14!52;UBERON:0007135!2.45e-14!52;UBERON:0000073!3.07e-14!75;UBERON:0001016!3.07e-14!75;UBERON:0001017!3.16e-14!73;UBERON:0005743!3.16e-14!73;UBERON:0000955!7.88e-13!50;UBERON:0006238!7.88e-13!50;UBERON:0002616!1.04e-12!49;UBERON:0002791!1.73e-12!29;UBERON:0003528!1.73e-12!29;UBERON:0001893!1.73e-12!29;UBERON:0002346!2.66e-11!71;UBERON:0003075!2.66e-11!71;UBERON:0007284!2.66e-11!71;UBERON:0003080!5.13e-11!40;UBERON:0002780!1.58e-10!39;UBERON:0001890!1.58e-10!39;UBERON:0006240!1.58e-10!39;UBERON:0004121!2.35e-10!102;UBERON:0000924!2.35e-10!102;UBERON:0006601!2.35e-10!102;UBERON:0000033!3.38e-10!63;UBERON:0003056!1.09e-08!49;UBERON:0000956!1.63e-08!21;UBERON:0001869!1.63e-08!21;UBERON:0000203!1.63e-08!21;UBERON:0007811!1.33e-07!86;UBERON:0000153!2.62e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.74e-35,34;UBERON:0000073,1.27e-33,54;UBERON:0001049,2.90e-30,52;UBERON:0005068,2.90e-30,52;UBERON:0006241,2.90e-30,52;UBERON:0007135,2.90e-30,52;UBERON:0003528,2.76e-28,29;UBERON:0002791,2.76e-28,29;UBERON:0001893,2.76e-28,29;UBERON:0001017,3.62e-27,73;UBERON:0001016,2.88e-26,75;UBERON:0002346,1.94e-23,64;UBERON:0003075,1.94e-23,64;UBERON:0007284,1.94e-23,64;UBERON:0002616,2.31e-22,46;UBERON:0002780,3.23e-22,39;UBERON:0001890,3.23e-22,39;UBERON:0006240,3.23e-22,39;UBERON:0000956,8.46e-22,21;UBERON:0001869,8.46e-22,21;UBERON:0000203,8.46e-22,21;UBERON:0000955,8.95e-22,47;UBERON:0006238,8.95e-22,47;UBERON:0003080,1.53e-21,40;UBERON:0010371,8.60e-20,73;UBERON:0004121,2.47e-19,95;UBERON:0000924,2.47e-19,95;UBERON:0006601,2.47e-19,95;UBERON:0003056,1.06e-16,49;UBERON:0010314,1.96e-14,92;UBERON:0002619,1.51e-13,17;UBERON:0000025,1.81e-10,114;UBERON:0002240,5.42e-10,6;UBERON:0005174,5.42e-10,6;UBERON:0001137,5.42e-10,6;UBERON:0001954,9.78e-10,7;UBERON:0003022,9.78e-10,7;UBERON:0002421,9.78e-10,7;UBERON:0000349,9.78e-10,7;UBERON:0002600,9.78e-10,7;UBERON:0004111,2.21e-09,122;UBERON:0003076,4.23e-09,12;UBERON:0003057,4.23e-09,12;UBERON:0000369,2.01e-08,5;UBERON:0002435,2.01e-08,5;UBERON:0000204,2.01e-08,5;UBERON:0010082,2.01e-08,5;UBERON:0002257,7.56e-08,3;UBERON:0001948,9.21e-08,5;UBERON:0002315,9.21e-08,5;UBERON:0004684,1.17e-07,3;UBERON:0002275,1.17e-07,3;UBERON:0002420,1.44e-07,8;UBERON:0007245,1.44e-07,8;UBERON:0010009,1.44e-07,8;UBERON:0010011,1.44e-07,8;UBERON:0000454,1.44e-07,8|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0,0.467225281191051,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0.274228867211478,0.42438965179803,0.340173160604279,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.709638518536602,0.367093504323363,0,0.218025156380447,0.219686182734472,0,0.55994568650145,0,0.167782606057736,0,0,0.257259436035947,0,0,0.809265843438391,0,0.633831403506179,0.677689064138264,0,0,0,0,0.299600110518405,1.15265491596466,4.25127410464758,7.83034442323806,6.52007380189284,0.571301968807607,1.10434270475807,3.30725157880376,5.36734637702124,2.75765635983006,2.20231761998777,1.0214987046815,1.22885226604995,0.923204014111357,1.09785172322892,2.08365348222704,0.279182999001381,0.56276261003168,1.06958773443767,1.17851434189467,1.85083185038834,1.4911955666024,0.227178579999552,0.226714680320357,0.869593466105033,0,0,0.539703191637817,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0.70667914902068,0.563373679106722,0,0,0,0.216491041011214,0,0,0.11418387971906,0.517875767294343,0,0.520455980298408,0.304465478312141,0.691846491768175,0,0.470354828542819,0.251333182659351,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.898743836428936,1.83000241127451,9.80103946480342,1.39059456153821,2.04572365864264,0.83115217823824,1.78465389374533,0.203678727700633,0.248813941220186,0,0,0,0,0.180062129805349,0.30140963567143,0.272145996605311,0.2562274405697,0.187403449119458,0,0,0.189106080167819,0.351902248327898,0.43839146485515,0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| ||
|EntrezGene=100855 | |||
|HGNC= | |||
|MCL_coexpression_id=459 | |||
|UniProt=E9PYB1,Q5U224,Q76LY3,Q8CGA2 | |||
|association_with_transcript=0bp_to_ENSMUST00000171385,NM_001113364,uc008xer.2,uc008xes.2_5end | |||
|description=CAGE_peak_5_at_Tbc1d14_5end | |||
|id=chr5:36873259..36873278,- | |||
|ontology_enrichment_celltype=CL:0000117!1.02e-12!23;CL:0000337!1.02e-12!23;CL:0000540!1.55e-08!33;CL:0000047!1.55e-08!33;CL:0000031!1.55e-08!33;CL:0000404!1.55e-08!33;CL:0000393!2.33e-08!39;CL:0000211!2.33e-08!39;CL:0000221!5.42e-08!44;CL:0000133!5.42e-08!44;CL:0002319!1.16e-07!43;CL:0000055!3.01e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.38e-24,23;CL:0000337,1.38e-24,23;CL:0002609,1.36e-16,6;CL:0000540,5.33e-16,33;CL:0000047,5.33e-16,33;CL:0000031,5.33e-16,33;CL:0000404,5.33e-16,33;CL:0002319,5.34e-13,43;CL:0000393,5.72e-13,39;CL:0000211,5.72e-13,39;CL:0000221,1.29e-12,44;CL:0000133,1.29e-12,44;CL:0002608,5.42e-09,3;CL:0002612,7.56e-08,3;CL:0002610,1.17e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.25e-15!34;UBERON:0001049!2.45e-14!52;UBERON:0005068!2.45e-14!52;UBERON:0006241!2.45e-14!52;UBERON:0007135!2.45e-14!52;UBERON:0000073!3.07e-14!75;UBERON:0001016!3.07e-14!75;UBERON:0001017!3.16e-14!73;UBERON:0005743!3.16e-14!73;UBERON:0000955!7.88e-13!50;UBERON:0006238!7.88e-13!50;UBERON:0002616!1.04e-12!49;UBERON:0002791!1.73e-12!29;UBERON:0003528!1.73e-12!29;UBERON:0001893!1.73e-12!29;UBERON:0002346!2.66e-11!71;UBERON:0003075!2.66e-11!71;UBERON:0007284!2.66e-11!71;UBERON:0003080!5.13e-11!40;UBERON:0002780!1.58e-10!39;UBERON:0001890!1.58e-10!39;UBERON:0006240!1.58e-10!39;UBERON:0004121!2.35e-10!102;UBERON:0000924!2.35e-10!102;UBERON:0006601!2.35e-10!102;UBERON:0000033!3.38e-10!63;UBERON:0003056!1.09e-08!49;UBERON:0000956!1.63e-08!21;UBERON:0001869!1.63e-08!21;UBERON:0000203!1.63e-08!21;UBERON:0007811!1.33e-07!86;UBERON:0000153!2.62e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.74e-35,34;UBERON:0000073,1.27e-33,54;UBERON:0001049,2.90e-30,52;UBERON:0005068,2.90e-30,52;UBERON:0006241,2.90e-30,52;UBERON:0007135,2.90e-30,52;UBERON:0003528,2.76e-28,29;UBERON:0002791,2.76e-28,29;UBERON:0001893,2.76e-28,29;UBERON:0001017,3.62e-27,73;UBERON:0001016,2.88e-26,75;UBERON:0002346,1.94e-23,64;UBERON:0003075,1.94e-23,64;UBERON:0007284,1.94e-23,64;UBERON:0002616,2.31e-22,46;UBERON:0002780,3.23e-22,39;UBERON:0001890,3.23e-22,39;UBERON:0006240,3.23e-22,39;UBERON:0000956,8.46e-22,21;UBERON:0001869,8.46e-22,21;UBERON:0000203,8.46e-22,21;UBERON:0000955,8.95e-22,47;UBERON:0006238,8.95e-22,47;UBERON:0003080,1.53e-21,40;UBERON:0010371,8.60e-20,73;UBERON:0004121,2.47e-19,95;UBERON:0000924,2.47e-19,95;UBERON:0006601,2.47e-19,95;UBERON:0003056,1.06e-16,49;UBERON:0010314,1.96e-14,92;UBERON:0002619,1.51e-13,17;UBERON:0000025,1.81e-10,114;UBERON:0002240,5.42e-10,6;UBERON:0005174,5.42e-10,6;UBERON:0001137,5.42e-10,6;UBERON:0001954,9.78e-10,7;UBERON:0003022,9.78e-10,7;UBERON:0002421,9.78e-10,7;UBERON:0000349,9.78e-10,7;UBERON:0002600,9.78e-10,7;UBERON:0004111,2.21e-09,122;UBERON:0003076,4.23e-09,12;UBERON:0003057,4.23e-09,12;UBERON:0000369,2.01e-08,5;UBERON:0002435,2.01e-08,5;UBERON:0000204,2.01e-08,5;UBERON:0010082,2.01e-08,5;UBERON:0002257,7.56e-08,3;UBERON:0001948,9.21e-08,5;UBERON:0002315,9.21e-08,5;UBERON:0004684,1.17e-07,3;UBERON:0002275,1.17e-07,3;UBERON:0002420,1.44e-07,8;UBERON:0007245,1.44e-07,8;UBERON:0010009,1.44e-07,8;UBERON:0010011,1.44e-07,8;UBERON:0000454,1.44e-07,8 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0,0.467225281191051,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0.274228867211478,0.42438965179803,0.340173160604279,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.709638518536602,0.367093504323363,0,0.218025156380447,0.219686182734472,0,0.55994568650145,0,0.167782606057736,0,0,0.257259436035947,0,0,0.809265843438391,0,0.633831403506179,0.677689064138264,0,0,0,0,0.299600110518405,1.15265491596466,4.25127410464758,7.83034442323806,6.52007380189284,0.571301968807607,1.10434270475807,3.30725157880376,5.36734637702124,2.75765635983006,2.20231761998777,1.0214987046815,1.22885226604995,0.923204014111357,1.09785172322892,2.08365348222704,0.279182999001381,0.56276261003168,1.06958773443767,1.17851434189467,1.85083185038834,1.4911955666024,0.227178579999552,0.226714680320357,0.869593466105033,0,0,0.539703191637817,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0.70667914902068,0.563373679106722,0,0,0,0.216491041011214,0,0,0.11418387971906,0.517875767294343,0,0.520455980298408,0.304465478312141,0.691846491768175,0,0.470354828542819,0.251333182659351,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.898743836428936,1.83000241127451,9.80103946480342,1.39059456153821,2.04572365864264,0.83115217823824,1.78465389374533,0.203678727700633,0.248813941220186,0,0,0,0,0.180062129805349,0.30140963567143,0.272145996605311,0.2562274405697,0.187403449119458,0,0,0.189106080167819,0.351902248327898,0.43839146485515,0,0,0.205782136407943,0,0.702213187313235,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0.493679549740441,0,0.162137619091711,0,0,0,2.10289948564127,5.24813523134351,0,0,0.639864751605702,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0.342745537829186,0,0.407302655690628,0.387904974335251,0.140271639780637,0.252946148497029,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0,0.472905432318573,0,0.318909537314974,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,1.76605648986571,1.52375192569864,0.327869890753351,0,0,0,0.430846795465598,0.238968797952552,0,0.566153061577665,0,0,0,0.321321316421807,0.141940085208269,0.534196811001766,0.651547837414304,0.329940245945071,0,0.485561272309963,0,0,0.295301892880773,0,0.516856586336442,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0.354680467284547,0,0.493647061806363,0,0,0.63549621259146,0,0,0,0.241251699712623,0.238744688006273,0.164140899745061,0,2.59595422814714,0.170870880797853,0,0,0.188368457004691,0,0,0,0,0.276399947608848,0,0.316335993581135,0,0.540026704109006,0,0.218362563746178,0,0.0826534557253359,0,0,0,0.56369293868419,0.299033092087958,0.330916980914195,0,0.258319646955462,0,0.117357238645754,0.13020438484395,0,0,0,0,0.405450430580328,0.102710957164827,0.25984164595559,0.358053391334963,0.596044064343795,0.120195449519969,0.147689527174577,0.100966449948148,0.228620419965,0.403304740547362,0.0974578807397524,0.384847366561318,0.467507608726276,0,0,0,0.167884616364078,0,0,0.36630324853453,0,0,1.12950368523413,3.22227665555024,0.572895513439397,1.71853182343688,0,0,1.35004500046361,0.45032120322422,1.81256963593682,0.51776031175182,0.103787347584177,1.19707462020309,0.170733605754134,0.729320151204882,0.209613162627982,0.919217542250071,0,0.412070114477788,0.64183841918363,1.26348605881899,1.01391719956096,0.565879024158229,0.561849044819294,0.448176066834085,0.861532034334199,0.476293691283074,0.695305955669133,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,1.06485483695602,0,0.290692833264657,0.282328141245992,0.338458431566706,0.182927972872773,0.526139422875686,0.407412341537585,0.561142271657738,0.474540072496697,0.492522411877817,0.409231043169689,0.77468420592983,0.578719832943424,1.24905288968973,0.467863216890817,0.429742108096597,0,0,0 | |||
|short_description=p5@Tbc1d14 | |||
}} |
Revision as of 07:35, 14 September 2013
Short description: | p5@Tbc1d14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tbc1d14_5end |
Coexpression cluster: | MCL_coexpression_mm9:459 |
Association with transcript: | 0bp_to_ENSMUST00000171385, NM_001113364, uc008xer.2, uc008xes.2_5end |
EntrezGene: | Tbc1d14 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.38e-24 | 23 |
neuroblast (sensu Vertebrata) | 1.38e-24 | 23 |
neuron of cerebral cortex | 1.36e-16 | 6 |
neuron | 5.33e-16 | 33 |
neuronal stem cell | 5.33e-16 | 33 |
neuroblast | 5.33e-16 | 33 |
electrically signaling cell | 5.33e-16 | 33 |
neural cell | 5.34e-13 | 43 |
electrically responsive cell | 5.72e-13 | 39 |
electrically active cell | 5.72e-13 | 39 |
ectodermal cell | 1.29e-12 | 44 |
neurectodermal cell | 1.29e-12 | 44 |
hippocampal neuron | 5.42e-09 | 3 |
neuron of the ventral spinal cord | 7.56e-08 | 3 |
raphe nuclei neuron | 1.17e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.