FFCP PHASE1:Mm9::chr4:107791110..107791126,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20280|HGNC=|MCL_coexpression_id=8|UniProt=A2APS4|association_with_transcript=-1bp_to_ENSMUST00000149106_5end|description=CAGE_peak_3_at_Scp2_5end|id=chr4:107791110..107791126,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.13e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.58e-07,31;UBERON:0005256,9.57e-07,45|phase1_expression=3.68342348341026,8.02643437570531,6.3699893514535,3.0246421130683,7.01254021924886,3.3575854382378,5.60670337429262,2.32421982194837,0.84473233291,0.234064526321993,0.34243593645101,0.319088635981346,4.62241970814255,5.42006494997784,1.99865857089398,1.41732687172878,0,2.68142840554502,1.91960207048034,2.54633791078818,4.33720779770456,2.87943758482567,2.35079810225042,4.15980299262857,6.65286915094793,7.46501553349526,8.61523992318149,7.97243560937789,7.60093677825496,7.81293402255785,4.8780712344167,0,0,0,7.22129049378186,7.31432439577366,7.55426618170766,12.5559489221072,25.0027310247616,25.1291397107423,17.0587131528994,19.8083190637949,19.9059244742773,3.77690453926732,3.04130793658544,2.38610777810186,0,1.74420125104357,1.75748946187577,2.3331587888914,1.95980990275508,0,2.85230430298152,3.62681071005672,3.6970317905671,1.80081605225163,4.01146815914259,4.12537673821954,2.02316460859598,1.05798195854407,0,3.38844532069132,1.77858959222228,1.3498495759221,0.988866362566974,2.8419204597844,1.19840044207362,1.53687322128622,4.35496371695606,4.18518408828241,5.25812403378455,0.571301968807607,3.75476519617743,3.55223317723367,2.1086003624012,0.919218786610021,1.10115880999389,4.85211884723713,4.6081959976873,1.31886287730194,1.9212405156506,5.73004707612436,3.07101298901519,1.68828783009504,6.41752640662602,2.94628585473668,2.27794689278565,3.16879057903011,1.13589289999776,3.32514864469856,2.31891590961342,34.4169550792555,20.3991400112325,33.4615978815447,36.3874793770695,32.7059627581055,6.31999890592883,3.57903677413921,4.93593408745451,1.41335829804136,2.81686839553361,0,2.54805239706646,0,2.16491041011214,1.26679932737549,1.01104889002957,12.2176751299394,5.69663344023778,4.89859058913922,1.73485326766136,2.13125834818499,2.53677046981664,2.41156224884196,4.11560474974967,7.28866229712118,1.23597483867187,15.6167305473505,1.76922110389975,2.58826959915855,1.54589062922275,2.90925151881133,1.86391761218122,1.75668478206928,3.35114730901528,12.7728527604296,6.82946209683746,2.99951365496704,5.46401976414178,3.44518470631092,3.20250421973039,2.01046963380583,2.78118912307642,4.09144731728529,4.98691306942944,4.05603157669394,2.64782346010822,5.47390670684409,11.625246887949,11.1534183619831,2.08192708740326,1.83921683546778,1.98068342785884,1.50704817835715,1.29269348387523,1.2811372028485,2.15513966487376,3.88055056108524,1.72454394346274,1.70195472151037,1.93546236580344,1.7535658594206,1.66828349535359,3.83077383174383,2.05782136407943,1.79130840136644,4.91549231119264,3.08817488537658,5.96743348730745,2.07125772535502,1.64168241986767,2.88099298337624,2.60419209143731,1.77087808572663,3.70241070929708,3.48800917125612,2.95100741539581,4.78737903705395,5.75959474697182,8.37254066803386,11.4307021459657,16.3743985916372,18.0031094538662,16.5073895075257,2.94405927989778,3.08713837137853,19.1642894130603,7.40461586657924,1.49301775374664,2.55460339046482,2.06187938115349,3.22693639397348,4.66993892074228,6.08722003560189,12.8122846617018,8.39964669092456,5.7807098024062,5.17286827306992,7.40863531052657,7.19055526923377,9.29393614461185,11.7493351220077,0.758671603812327,2.17072173958485,3.38123207019241,2.64746726198909,1.35766741017338,1.82353131714828,3.54124607895841,1.91893192373483,4.23896565171712,3.33172342588861,21.0481365231876,1.66845105716094,2.75182593158484,1.34917267430912,2.63718157805054,2.894125917029,4.07401362850272,3.45235364940973,6.16113861745134,17.2973690308491,14.3768206527355,23.0727387554472,19.9704110793319,19.4485736019276,31.2151499528127,19.2977408545347,4.80358294433172,2.84237117655727,1.79261474086228,3.39490171550376,2.81628297946203,2.51259386162724,3.80869825417622,3.31727201358258,2.99506773801763,2.6575762757853,3.18909537314974,4.42430949732493,5.69860440157455,4.05017364028232,6.03165135757089,4.35124547054968,3.93411418415229,4.41498794087572,3.21101179975584,5.86058432961016,5.90165803356032,8.58401152494868,1.57754109708128,1.56175497718655,1.50796378412959,2.62865677747807,1.33679204449436,0.849229592366497,3.64329631507405,0.292255857911312,1.58115111178609,2.24924921495265,4.9679029822894,3.38324646967785,2.28041743095006,3.62934270539578,2.65490276679926,1.45668381692989,1.51161778482376,2.64047111658257,3.54362271456927,3.68922177532713,4.13485269069154,4.36240475373007,3.92147116223193,5.37262488490887,5.27093042874994,6.18813259489121,3.40439605753788,1.26042765821917,1.55230420539305,2.14337035031592,3.3694644392032,3.0322698992352,2.46823530903181,1.8267896946876,3.98941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| ||
|EntrezGene=20280 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=A2APS4 | |||
|association_with_transcript=-1bp_to_ENSMUST00000149106_5end | |||
|description=CAGE_peak_3_at_Scp2_5end | |||
|id=chr4:107791110..107791126,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.13e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.58e-07,31;UBERON:0005256,9.57e-07,45 | |||
|phase1_expression=3.68342348341026,8.02643437570531,6.3699893514535,3.0246421130683,7.01254021924886,3.3575854382378,5.60670337429262,2.32421982194837,0.84473233291,0.234064526321993,0.34243593645101,0.319088635981346,4.62241970814255,5.42006494997784,1.99865857089398,1.41732687172878,0,2.68142840554502,1.91960207048034,2.54633791078818,4.33720779770456,2.87943758482567,2.35079810225042,4.15980299262857,6.65286915094793,7.46501553349526,8.61523992318149,7.97243560937789,7.60093677825496,7.81293402255785,4.8780712344167,0,0,0,7.22129049378186,7.31432439577366,7.55426618170766,12.5559489221072,25.0027310247616,25.1291397107423,17.0587131528994,19.8083190637949,19.9059244742773,3.77690453926732,3.04130793658544,2.38610777810186,0,1.74420125104357,1.75748946187577,2.3331587888914,1.95980990275508,0,2.85230430298152,3.62681071005672,3.6970317905671,1.80081605225163,4.01146815914259,4.12537673821954,2.02316460859598,1.05798195854407,0,3.38844532069132,1.77858959222228,1.3498495759221,0.988866362566974,2.8419204597844,1.19840044207362,1.53687322128622,4.35496371695606,4.18518408828241,5.25812403378455,0.571301968807607,3.75476519617743,3.55223317723367,2.1086003624012,0.919218786610021,1.10115880999389,4.85211884723713,4.6081959976873,1.31886287730194,1.9212405156506,5.73004707612436,3.07101298901519,1.68828783009504,6.41752640662602,2.94628585473668,2.27794689278565,3.16879057903011,1.13589289999776,3.32514864469856,2.31891590961342,34.4169550792555,20.3991400112325,33.4615978815447,36.3874793770695,32.7059627581055,6.31999890592883,3.57903677413921,4.93593408745451,1.41335829804136,2.81686839553361,0,2.54805239706646,0,2.16491041011214,1.26679932737549,1.01104889002957,12.2176751299394,5.69663344023778,4.89859058913922,1.73485326766136,2.13125834818499,2.53677046981664,2.41156224884196,4.11560474974967,7.28866229712118,1.23597483867187,15.6167305473505,1.76922110389975,2.58826959915855,1.54589062922275,2.90925151881133,1.86391761218122,1.75668478206928,3.35114730901528,12.7728527604296,6.82946209683746,2.99951365496704,5.46401976414178,3.44518470631092,3.20250421973039,2.01046963380583,2.78118912307642,4.09144731728529,4.98691306942944,4.05603157669394,2.64782346010822,5.47390670684409,11.625246887949,11.1534183619831,2.08192708740326,1.83921683546778,1.98068342785884,1.50704817835715,1.29269348387523,1.2811372028485,2.15513966487376,3.88055056108524,1.72454394346274,1.70195472151037,1.93546236580344,1.7535658594206,1.66828349535359,3.83077383174383,2.05782136407943,1.79130840136644,4.91549231119264,3.08817488537658,5.96743348730745,2.07125772535502,1.64168241986767,2.88099298337624,2.60419209143731,1.77087808572663,3.70241070929708,3.48800917125612,2.95100741539581,4.78737903705395,5.75959474697182,8.37254066803386,11.4307021459657,16.3743985916372,18.0031094538662,16.5073895075257,2.94405927989778,3.08713837137853,19.1642894130603,7.40461586657924,1.49301775374664,2.55460339046482,2.06187938115349,3.22693639397348,4.66993892074228,6.08722003560189,12.8122846617018,8.39964669092456,5.7807098024062,5.17286827306992,7.40863531052657,7.19055526923377,9.29393614461185,11.7493351220077,0.758671603812327,2.17072173958485,3.38123207019241,2.64746726198909,1.35766741017338,1.82353131714828,3.54124607895841,1.91893192373483,4.23896565171712,3.33172342588861,21.0481365231876,1.66845105716094,2.75182593158484,1.34917267430912,2.63718157805054,2.894125917029,4.07401362850272,3.45235364940973,6.16113861745134,17.2973690308491,14.3768206527355,23.0727387554472,19.9704110793319,19.4485736019276,31.2151499528127,19.2977408545347,4.80358294433172,2.84237117655727,1.79261474086228,3.39490171550376,2.81628297946203,2.51259386162724,3.80869825417622,3.31727201358258,2.99506773801763,2.6575762757853,3.18909537314974,4.42430949732493,5.69860440157455,4.05017364028232,6.03165135757089,4.35124547054968,3.93411418415229,4.41498794087572,3.21101179975584,5.86058432961016,5.90165803356032,8.58401152494868,1.57754109708128,1.56175497718655,1.50796378412959,2.62865677747807,1.33679204449436,0.849229592366497,3.64329631507405,0.292255857911312,1.58115111178609,2.24924921495265,4.9679029822894,3.38324646967785,2.28041743095006,3.62934270539578,2.65490276679926,1.45668381692989,1.51161778482376,2.64047111658257,3.54362271456927,3.68922177532713,4.13485269069154,4.36240475373007,3.92147116223193,5.37262488490887,5.27093042874994,6.18813259489121,3.40439605753788,1.26042765821917,1.55230420539305,2.14337035031592,3.3694644392032,3.0322698992352,2.46823530903181,1.8267896946876,3.98941903708308,1.90648863777438,3.52845436887939,3.2977250588296,3.06782410722221,3.01564624640779,1.3130957840345,1.31312719796049,9.03590593552537,6.48988557036784,3.41741761595705,2.06386867963222,3.70389054739423,0.941842285023455,1.6403307326523,2.28778173206523,2.88963330989554,4.19854356970974,3.45499934511059,3.81868247206045,1.73984796469624,2.23651413839534,2.70013352054503,2.09088296014469,4.14888871117737,4.45052343069908,6.11635572367486,8.11443420150492,1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| |||
|short_description=p3@Scp2 | |||
}} | |||
Revision as of 03:23, 14 September 2013
| Short description: | p3@Scp2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Scp2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:8 |
| Association with transcript: | -1bp_to_ENSMUST00000149106_5end |
| EntrezGene: | Scp2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestine | 1.58e-07 | 31 |
| trunk mesenchyme | 9.57e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
