FFCP PHASE1:Mm9::chr14:123275688..123275702,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=47|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:123275688..123275702,+|id=chr14:123275688..123275702,+|ontology_enrichment_celltype=CL:0000117!8.98e-16!23;CL:0000337!8.98e-16!23;CL:0000540!1.98e-10!33;CL:0000047!1.98e-10!33;CL:0000031!1.98e-10!33;CL:0000404!1.98e-10!33;CL:0000221!5.77e-08!44;CL:0000133!5.77e-08!44;CL:0000393!7.72e-08!39;CL:0000211!7.72e-08!39;CL:0002319!2.56e-07!43|ontology_enrichment_celltype_v019_2=CL:0002613,9.82e-14,3;CL:0000117,1.33e-13,23;CL:0000337,1.33e-13,23;CL:0000540,2.06e-11,33;CL:0000047,2.06e-11,33;CL:0000031,2.06e-11,33;CL:0000404,2.06e-11,33;CL:0000393,2.04e-09,39;CL:0000211,2.04e-09,39;CL:0002611,2.67e-09,2;CL:0002319,2.14e-08,43;CL:0000221,3.60e-08,44;CL:0000133,3.60e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.40e-28!52;UBERON:0005068!6.40e-28!52;UBERON:0006241!6.40e-28!52;UBERON:0007135!6.40e-28!52;UBERON:0000033!6.96e-28!63;UBERON:0000955!1.16e-26!50;UBERON:0006238!1.16e-26!50;UBERON:0001017!4.55e-26!73;UBERON:0005743!4.55e-26!73;UBERON:0002616!1.76e-25!49;UBERON:0000073!6.17e-25!75;UBERON:0001016!6.17e-25!75;UBERON:0002346!3.03e-23!71;UBERON:0003075!3.03e-23!71;UBERON:0007284!3.03e-23!71;UBERON:0003056!3.09e-21!49;UBERON:0003080!6.64e-21!40;UBERON:0004121!1.50e-20!102;UBERON:0000924!1.50e-20!102;UBERON:0006601!1.50e-20!102;UBERON:0002780!3.40e-20!39;UBERON:0001890!3.40e-20!39;UBERON:0006240!3.40e-20!39;UBERON:0002020!4.61e-19!34;UBERON:0007811!2.36e-16!86;UBERON:0002791!4.00e-14!29;UBERON:0003528!4.00e-14!29;UBERON:0001893!4.00e-14!29;UBERON:0000153!9.95e-14!94;UBERON:0000956!8.26e-09!21;UBERON:0001869!8.26e-09!21;UBERON:0000203!8.26e-09!21;UBERON:0003076!1.84e-07!12;UBERON:0003057!1.84e-07!12;UBERON:0001894!4.15e-07!10;UBERON:0006222!4.15e-07!10;UBERON:0002420!6.67e-07!8;UBERON:0007245!6.67e-07!8;UBERON:0010009!6.67e-07!8;UBERON:0010011!6.67e-07!8;UBERON:0000454!6.67e-07!8;UBERON:0002298!8.90e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.88e-25,54;UBERON:0001049,1.03e-23,52;UBERON:0005068,1.03e-23,52;UBERON:0006241,1.03e-23,52;UBERON:0007135,1.03e-23,52;UBERON:0001017,6.62e-23,73;UBERON:0001016,3.24e-22,75;UBERON:0002346,9.80e-19,64;UBERON:0003075,9.80e-19,64;UBERON:0007284,9.80e-19,64;UBERON:0010371,2.76e-18,73;UBERON:0000955,3.96e-18,47;UBERON:0006238,3.96e-18,47;UBERON:0004121,6.58e-17,95;UBERON:0000924,6.58e-17,95;UBERON:0006601,6.58e-17,95;UBERON:0002020,5.23e-16,34;UBERON:0002616,6.22e-16,46;UBERON:0010314,6.80e-14,92;UBERON:0002780,1.18e-13,39;UBERON:0001890,1.18e-13,39;UBERON:0006240,1.18e-13,39;UBERON:0001948,1.57e-13,5;UBERON:0002315,1.57e-13,5;UBERON:0003080,2.91e-13,40;UBERON:0003076,1.67e-12,12;UBERON:0003057,1.67e-12,12;UBERON:0002240,2.62e-11,6;UBERON:0005174,2.62e-11,6;UBERON:0001137,2.62e-11,6;UBERON:0003056,1.84e-10,49;UBERON:0004111,1.01e-09,122;UBERON:0002256,2.67e-09,2;UBERON:0000025,3.18e-09,114;UBERON:0002420,5.73e-09,8;UBERON:0007245,5.73e-09,8;UBERON:0010009,5.73e-09,8;UBERON:0010011,5.73e-09,8;UBERON:0000454,5.73e-09,8;UBERON:0003528,1.93e-08,29;UBERON:0002791,1.93e-08,29;UBERON:0001893,1.93e-08,29;UBERON:0000369,1.96e-08,5;UBERON:0002435,1.96e-08,5;UBERON:0000204,1.96e-08,5;UBERON:0010082,1.96e-08,5;UBERON:0001894,8.92e-07,10;UBERON:0006222,8.92e-07,10|phase1_expression=28.0260482433389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,0.540023753326763,0.210324961351382,1.42825492201902,1.32521124570968,0,0.0958454710182364,0,1.10115880999389,0.127687338085188,0.153606533256243,1.97829431595291,1.37231465403614,2.08365348222704,0.558365998002762,1.68828783009504,0.61119299110724,1.47314292736834,1.13897344639282,0.559198337475902,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,4.9772735491963,4.81727425670947,0,0,0,0,0.299581278809645,0,0.125654352112864,1.21677024134594,0,1.0389402227978,0.648965052271031,0,0,0,0,0.260240885925407,0,0,0.30140963567143,0.272145996605311,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,1.44066457330998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.776152102696527,0.857348140126369,1.24138163549592,2.49716344642899,1.15184314421485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0.685082519770642,1.5107877947794,1.35004500046361,0.45032120322422,0,0.51776031175182,0.103787347584177,0.399024873401031,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0.377252682772152,0.187283014939765,0.128050304809739,0.17230640686684,0,0.347652977834566,0.192909220463705,0,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0.581385666529314,0.188218760830661,0.338458431566706,0.182927972872773,0,0.135804113845862,0.561142271657738,0.237270036248348,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p@chr14:123275688..123275702,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=47 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:123275688..123275702,+ | |||
|id=chr14:123275688..123275702,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.98e-16!23;CL:0000337!8.98e-16!23;CL:0000540!1.98e-10!33;CL:0000047!1.98e-10!33;CL:0000031!1.98e-10!33;CL:0000404!1.98e-10!33;CL:0000221!5.77e-08!44;CL:0000133!5.77e-08!44;CL:0000393!7.72e-08!39;CL:0000211!7.72e-08!39;CL:0002319!2.56e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,9.82e-14,3;CL:0000117,1.33e-13,23;CL:0000337,1.33e-13,23;CL:0000540,2.06e-11,33;CL:0000047,2.06e-11,33;CL:0000031,2.06e-11,33;CL:0000404,2.06e-11,33;CL:0000393,2.04e-09,39;CL:0000211,2.04e-09,39;CL:0002611,2.67e-09,2;CL:0002319,2.14e-08,43;CL:0000221,3.60e-08,44;CL:0000133,3.60e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.40e-28!52;UBERON:0005068!6.40e-28!52;UBERON:0006241!6.40e-28!52;UBERON:0007135!6.40e-28!52;UBERON:0000033!6.96e-28!63;UBERON:0000955!1.16e-26!50;UBERON:0006238!1.16e-26!50;UBERON:0001017!4.55e-26!73;UBERON:0005743!4.55e-26!73;UBERON:0002616!1.76e-25!49;UBERON:0000073!6.17e-25!75;UBERON:0001016!6.17e-25!75;UBERON:0002346!3.03e-23!71;UBERON:0003075!3.03e-23!71;UBERON:0007284!3.03e-23!71;UBERON:0003056!3.09e-21!49;UBERON:0003080!6.64e-21!40;UBERON:0004121!1.50e-20!102;UBERON:0000924!1.50e-20!102;UBERON:0006601!1.50e-20!102;UBERON:0002780!3.40e-20!39;UBERON:0001890!3.40e-20!39;UBERON:0006240!3.40e-20!39;UBERON:0002020!4.61e-19!34;UBERON:0007811!2.36e-16!86;UBERON:0002791!4.00e-14!29;UBERON:0003528!4.00e-14!29;UBERON:0001893!4.00e-14!29;UBERON:0000153!9.95e-14!94;UBERON:0000956!8.26e-09!21;UBERON:0001869!8.26e-09!21;UBERON:0000203!8.26e-09!21;UBERON:0003076!1.84e-07!12;UBERON:0003057!1.84e-07!12;UBERON:0001894!4.15e-07!10;UBERON:0006222!4.15e-07!10;UBERON:0002420!6.67e-07!8;UBERON:0007245!6.67e-07!8;UBERON:0010009!6.67e-07!8;UBERON:0010011!6.67e-07!8;UBERON:0000454!6.67e-07!8;UBERON:0002298!8.90e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.88e-25,54;UBERON:0001049,1.03e-23,52;UBERON:0005068,1.03e-23,52;UBERON:0006241,1.03e-23,52;UBERON:0007135,1.03e-23,52;UBERON:0001017,6.62e-23,73;UBERON:0001016,3.24e-22,75;UBERON:0002346,9.80e-19,64;UBERON:0003075,9.80e-19,64;UBERON:0007284,9.80e-19,64;UBERON:0010371,2.76e-18,73;UBERON:0000955,3.96e-18,47;UBERON:0006238,3.96e-18,47;UBERON:0004121,6.58e-17,95;UBERON:0000924,6.58e-17,95;UBERON:0006601,6.58e-17,95;UBERON:0002020,5.23e-16,34;UBERON:0002616,6.22e-16,46;UBERON:0010314,6.80e-14,92;UBERON:0002780,1.18e-13,39;UBERON:0001890,1.18e-13,39;UBERON:0006240,1.18e-13,39;UBERON:0001948,1.57e-13,5;UBERON:0002315,1.57e-13,5;UBERON:0003080,2.91e-13,40;UBERON:0003076,1.67e-12,12;UBERON:0003057,1.67e-12,12;UBERON:0002240,2.62e-11,6;UBERON:0005174,2.62e-11,6;UBERON:0001137,2.62e-11,6;UBERON:0003056,1.84e-10,49;UBERON:0004111,1.01e-09,122;UBERON:0002256,2.67e-09,2;UBERON:0000025,3.18e-09,114;UBERON:0002420,5.73e-09,8;UBERON:0007245,5.73e-09,8;UBERON:0010009,5.73e-09,8;UBERON:0010011,5.73e-09,8;UBERON:0000454,5.73e-09,8;UBERON:0003528,1.93e-08,29;UBERON:0002791,1.93e-08,29;UBERON:0001893,1.93e-08,29;UBERON:0000369,1.96e-08,5;UBERON:0002435,1.96e-08,5;UBERON:0000204,1.96e-08,5;UBERON:0010082,1.96e-08,5;UBERON:0001894,8.92e-07,10;UBERON:0006222,8.92e-07,10 | |||
|phase1_expression=28.0260482433389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,0.540023753326763,0.210324961351382,1.42825492201902,1.32521124570968,0,0.0958454710182364,0,1.10115880999389,0.127687338085188,0.153606533256243,1.97829431595291,1.37231465403614,2.08365348222704,0.558365998002762,1.68828783009504,0.61119299110724,1.47314292736834,1.13897344639282,0.559198337475902,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,4.9772735491963,4.81727425670947,0,0,0,0,0.299581278809645,0,0.125654352112864,1.21677024134594,0,1.0389402227978,0.648965052271031,0,0,0,0,0.260240885925407,0,0,0.30140963567143,0.272145996605311,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,1.44066457330998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.776152102696527,0.857348140126369,1.24138163549592,2.49716344642899,1.15184314421485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0.685082519770642,1.5107877947794,1.35004500046361,0.45032120322422,0,0.51776031175182,0.103787347584177,0.399024873401031,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0.377252682772152,0.187283014939765,0.128050304809739,0.17230640686684,0,0.347652977834566,0.192909220463705,0,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0.581385666529314,0.188218760830661,0.338458431566706,0.182927972872773,0,0.135804113845862,0.561142271657738,0.237270036248348,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr14:123275688..123275702,+ | |||
}} |
Revision as of 01:38, 13 September 2013
Short description: | p@chr14:123275688..123275702, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:123275688..123275702, + |
Coexpression cluster: | MCL_coexpression_mm9:47 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 9.82e-14 | 3 |
CNS neuron (sensu Vertebrata) | 1.33e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.33e-13 | 23 |
neuron | 2.06e-11 | 33 |
neuronal stem cell | 2.06e-11 | 33 |
neuroblast | 2.06e-11 | 33 |
electrically signaling cell | 2.06e-11 | 33 |
electrically responsive cell | 2.04e-09 | 39 |
electrically active cell | 2.04e-09 | 39 |
neuron of the dorsal spinal cord | 2.67e-09 | 2 |
neural cell | 2.14e-08 | 43 |
ectodermal cell | 3.60e-08 | 44 |
neurectodermal cell | 3.60e-08 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.