FFCP PHASE1:Mm9::chr2:73160809..73160811,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=72|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:73160809..73160811,+|id=chr2:73160809..73160811,+|ontology_enrichment_celltype=CL:0000068!2.61e-13!3;CL:0002202!2.61e-13!3;CL:0000069!2.61e-13!3;CL:0002632!2.61e-13!3;CL:0002368!2.61e-13!3;CL:0000307!2.61e-13!3;CL:0000377!2.61e-13!3;CL:0000215!5.98e-13!3;CL:0000630!9.42e-13!3;CL:0000349!1.48e-12!3;CL:0000351!1.48e-12!3;CL:0000325!3.18e-09!2;CL:0000217!3.18e-09!2;CL:0000328!3.18e-09!2;CL:0002573!3.18e-09!2;CL:0002376!3.18e-09!2;CL:0000218!3.18e-09!2;CL:0000692!3.18e-09!2;CL:0002377!3.18e-09!2;CL:0002375!3.18e-09!2;CL:0000548!4.97e-08!115;CL:0000004!4.97e-08!115;CL:0000255!4.97e-08!115;CL:0000063!8.55e-08!66;CL:0002371!9.65e-08!118;CL:0000144!1.81e-07!121;CL:0000012!1.81e-07!121;CL:0000219!6.60e-07!54|ontology_enrichment_celltype_v019_2=CL:0000068,4.54e-30,3;CL:0002202,4.54e-30,3;CL:0000069,4.54e-30,3;CL:0002632,4.54e-30,3;CL:0002368,4.54e-30,3;CL:0000307,4.54e-30,3;CL:0000377,4.54e-30,3;CL:0000215,3.42e-29,3;CL:0000217,3.91e-20,2;CL:0000328,3.91e-20,2;CL:0002573,3.91e-20,2;CL:0002376,3.91e-20,2;CL:0000218,3.91e-20,2;CL:0000692,3.91e-20,2;CL:0002377,3.91e-20,2;CL:0002375,3.91e-20,2;CL:0000213,8.99e-11,1;CL:0002078,8.99e-11,1;CL:0000115,8.99e-11,1;CL:0002262,8.99e-11,1;CL:1000398,8.99e-11,1;CL:0000223,3.51e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003126!2.61e-13!3;UBERON:0001005!2.61e-13!3;UBERON:0007196!2.61e-13!3;UBERON:0001558!2.61e-13!3;UBERON:0000358!1.48e-12!3;UBERON:0000307!1.48e-12!3;UBERON:0001962!3.51e-08!2;UBERON:0001961!3.51e-08!2;UBERON:0001744!3.51e-08!2|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.54e-30,3;UBERON:0001005,4.54e-30,3;UBERON:0007196,4.54e-30,3;UBERON:0001558,4.54e-30,3;UBERON:0002394,8.99e-11,1;UBERON:0001281,8.99e-11,1;UBERON:0000353,8.99e-11,1;UBERON:0003497,8.99e-11,1;UBERON:0003909,8.99e-11,1;UBERON:0003928,8.99e-11,1;UBERON:0003835,8.99e-11,1;UBERON:0003513,8.99e-11,1;UBERON:0001280,8.99e-11,1;UBERON:0004647,8.99e-11,1;UBERON:0002294,8.99e-11,1;UBERON:0001173,8.99e-11,1;UBERON:0004912,8.99e-11,1;UBERON:0005171,8.99e-11,1|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0.274228867211478,0,0,0,0.261199789138935,0.159992422793407,0.22940928106717,0,0,0,0.380046838912748,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96888102666279,1.5870027622425,1.15945795480671,0.860423876981386,0,0,0,0,0,0,0,2.12003744706204,0.422530259330042,0,0,0,4.5463118612355,4.05375784760158,1.01104889002957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01582567878545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.269141569828427,2.68615386182526,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:73160809..73160811,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:73160809..73160811,+ | |||
|id=chr2:73160809..73160811,+ | |||
|ontology_enrichment_celltype=CL:0000068!2.61e-13!3;CL:0002202!2.61e-13!3;CL:0000069!2.61e-13!3;CL:0002632!2.61e-13!3;CL:0002368!2.61e-13!3;CL:0000307!2.61e-13!3;CL:0000377!2.61e-13!3;CL:0000215!5.98e-13!3;CL:0000630!9.42e-13!3;CL:0000349!1.48e-12!3;CL:0000351!1.48e-12!3;CL:0000325!3.18e-09!2;CL:0000217!3.18e-09!2;CL:0000328!3.18e-09!2;CL:0002573!3.18e-09!2;CL:0002376!3.18e-09!2;CL:0000218!3.18e-09!2;CL:0000692!3.18e-09!2;CL:0002377!3.18e-09!2;CL:0002375!3.18e-09!2;CL:0000548!4.97e-08!115;CL:0000004!4.97e-08!115;CL:0000255!4.97e-08!115;CL:0000063!8.55e-08!66;CL:0002371!9.65e-08!118;CL:0000144!1.81e-07!121;CL:0000012!1.81e-07!121;CL:0000219!6.60e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,4.54e-30,3;CL:0002202,4.54e-30,3;CL:0000069,4.54e-30,3;CL:0002632,4.54e-30,3;CL:0002368,4.54e-30,3;CL:0000307,4.54e-30,3;CL:0000377,4.54e-30,3;CL:0000215,3.42e-29,3;CL:0000217,3.91e-20,2;CL:0000328,3.91e-20,2;CL:0002573,3.91e-20,2;CL:0002376,3.91e-20,2;CL:0000218,3.91e-20,2;CL:0000692,3.91e-20,2;CL:0002377,3.91e-20,2;CL:0002375,3.91e-20,2;CL:0000213,8.99e-11,1;CL:0002078,8.99e-11,1;CL:0000115,8.99e-11,1;CL:0002262,8.99e-11,1;CL:1000398,8.99e-11,1;CL:0000223,3.51e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003126!2.61e-13!3;UBERON:0001005!2.61e-13!3;UBERON:0007196!2.61e-13!3;UBERON:0001558!2.61e-13!3;UBERON:0000358!1.48e-12!3;UBERON:0000307!1.48e-12!3;UBERON:0001962!3.51e-08!2;UBERON:0001961!3.51e-08!2;UBERON:0001744!3.51e-08!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.54e-30,3;UBERON:0001005,4.54e-30,3;UBERON:0007196,4.54e-30,3;UBERON:0001558,4.54e-30,3;UBERON:0002394,8.99e-11,1;UBERON:0001281,8.99e-11,1;UBERON:0000353,8.99e-11,1;UBERON:0003497,8.99e-11,1;UBERON:0003909,8.99e-11,1;UBERON:0003928,8.99e-11,1;UBERON:0003835,8.99e-11,1;UBERON:0003513,8.99e-11,1;UBERON:0001280,8.99e-11,1;UBERON:0004647,8.99e-11,1;UBERON:0002294,8.99e-11,1;UBERON:0001173,8.99e-11,1;UBERON:0004912,8.99e-11,1;UBERON:0005171,8.99e-11,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0.274228867211478,0,0,0,0.261199789138935,0.159992422793407,0.22940928106717,0,0,0,0.380046838912748,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96888102666279,1.5870027622425,1.15945795480671,0.860423876981386,0,0,0,0,0,0,0,2.12003744706204,0.422530259330042,0,0,0,4.5463118612355,4.05375784760158,1.01104889002957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01582567878545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.269141569828427,2.68615386182526,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:73160809..73160811,+ | |||
}} |
Revision as of 00:29, 14 September 2013
Short description: | p@chr2:73160809..73160811, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:73160809..73160811, + |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 4.54e-30 | 3 |
epithelial cell of tracheobronchial tree | 4.54e-30 | 3 |
branched duct epithelial cell | 4.54e-30 | 3 |
epithelial cell of lower respiratory tract | 4.54e-30 | 3 |
respiratory epithelial cell | 4.54e-30 | 3 |
tracheal epithelial cell | 4.54e-30 | 3 |
tracheoblast | 4.54e-30 | 3 |
barrier cell | 3.42e-29 | 3 |
insulating cell | 3.91e-20 | 2 |
myelin accumulating cell | 3.91e-20 | 2 |
Schwann cell | 3.91e-20 | 2 |
non-myelinating Schwann cell | 3.91e-20 | 2 |
myelinating Schwann cell;;Schwann cell | 3.91e-20 | 2 |
terminal Schwann cell | 3.91e-20 | 2 |
immature Schwann cell | 3.91e-20 | 2 |
Schwann cell precursor | 3.91e-20 | 2 |
lining cell | 8.99e-11 | 1 |
meso-epithelial cell | 8.99e-11 | 1 |
endothelial cell | 8.99e-11 | 1 |
endothelial cell of sinusoid | 8.99e-11 | 1 |
endothelial cell of hepatic sinusoid | 8.99e-11 | 1 |
endodermal cell | 3.51e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
trachea | 4.54e-30 | 3 |
respiratory airway | 4.54e-30 | 3 |
tracheobronchial tree | 4.54e-30 | 3 |
lower respiratory tract | 4.54e-30 | 3 |
bile duct | 8.99e-11 | 1 |
hepatic sinusoid | 8.99e-11 | 1 |
parenchyma | 8.99e-11 | 1 |
abdomen blood vessel | 8.99e-11 | 1 |
sinusoid | 8.99e-11 | 1 |
digestive system duct | 8.99e-11 | 1 |
abdominal segment blood vessel | 8.99e-11 | 1 |
trunk blood vessel | 8.99e-11 | 1 |
liver parenchyma | 8.99e-11 | 1 |
liver lobule | 8.99e-11 | 1 |
biliary system | 8.99e-11 | 1 |
biliary tree | 8.99e-11 | 1 |
biliary bud | 8.99e-11 | 1 |
hepatic duct | 8.99e-11 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.