FFCP PHASE1:Mm9::chr4:114914645..114914653,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=230639|HGNC=|MCL_coexpression_id=58|UniProt=|association_with_transcript=-35bp_to_ENSMUST00000118278,NM_001100183,uc008ueq.1_5end|description=CAGE_peak_1_at_Cyp4a29-ps_5end|id=chr4:114914645..114914653,+|ontology_enrichment_celltype=CL:0000473!1.80e-13!3;CL:0000627!1.80e-13!3;CL:0000682!1.80e-13!3|ontology_enrichment_celltype_v019_2=CL:0000682,1.83e-30,3;CL:0000473,1.73e-13,7;CL:0000066,4.72e-10,25;CL:0000239,1.89e-07,6;CL:0000677,1.89e-07,6;CL:0000584,1.89e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.80e-12!15;UBERON:0004923!1.28e-09!24;UBERON:0001962!5.50e-09!2;UBERON:0001961!5.50e-09!2;UBERON:0001744!5.50e-09!2;UBERON:0001242!1.16e-07!13;UBERON:0000060!1.16e-07!13;UBERON:0001262!1.16e-07!13;UBERON:0004786!1.16e-07!13;UBERON:0003975!1.47e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001723,7.19e-11,1;UBERON:0001033,7.19e-11,1;UBERON:0010056,7.19e-11,1;UBERON:0000996,8.99e-11,1;UBERON:0000344,9.63e-11,15;UBERON:0003199,1.12e-10,1;UBERON:0000161,1.43e-08,5;UBERON:0001242,1.96e-07,13;UBERON:0001262,1.96e-07,13;UBERON:0004786,1.96e-07,13;UBERON:0004923,7.78e-07,24|phase1_expression=0,7.67745896806594,14.5599756604652,0,0,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,1.14704640533585,21.8208146363708,11.1998119001359,16.3758136841276,0,0.252030129759931,14.8559442139054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44152920676507,0,0,0,0,0,0.549454872801795,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p1@Cyp4a29-ps}} | ||
|EntrezGene=230639 | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt= | |||
|association_with_transcript=-35bp_to_ENSMUST00000118278,NM_001100183,uc008ueq.1_5end | |||
|description=CAGE_peak_1_at_Cyp4a29-ps_5end | |||
|id=chr4:114914645..114914653,+ | |||
|ontology_enrichment_celltype=CL:0000473!1.80e-13!3;CL:0000627!1.80e-13!3;CL:0000682!1.80e-13!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.83e-30,3;CL:0000473,1.73e-13,7;CL:0000066,4.72e-10,25;CL:0000239,1.89e-07,6;CL:0000677,1.89e-07,6;CL:0000584,1.89e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.80e-12!15;UBERON:0004923!1.28e-09!24;UBERON:0001962!5.50e-09!2;UBERON:0001961!5.50e-09!2;UBERON:0001744!5.50e-09!2;UBERON:0001242!1.16e-07!13;UBERON:0000060!1.16e-07!13;UBERON:0001262!1.16e-07!13;UBERON:0004786!1.16e-07!13;UBERON:0003975!1.47e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,7.19e-11,1;UBERON:0001033,7.19e-11,1;UBERON:0010056,7.19e-11,1;UBERON:0000996,8.99e-11,1;UBERON:0000344,9.63e-11,15;UBERON:0003199,1.12e-10,1;UBERON:0000161,1.43e-08,5;UBERON:0001242,1.96e-07,13;UBERON:0001262,1.96e-07,13;UBERON:0004786,1.96e-07,13;UBERON:0004923,7.78e-07,24 | |||
|phase1_expression=0,7.67745896806594,14.5599756604652,0,0,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,1.14704640533585,21.8208146363708,11.1998119001359,16.3758136841276,0,0.252030129759931,14.8559442139054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44152920676507,0,0,0,0,0,0.549454872801795,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p1@Cyp4a29-ps | |||
}} |
Revision as of 03:29, 14 September 2013
Short description: | p1@Cyp4a29-ps |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cyp4a29-ps_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | -35bp_to_ENSMUST00000118278, NM_001100183, uc008ueq.1_5end |
EntrezGene: | Cyp4a29-ps |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.83e-30 | 3 |
defensive cell | 1.73e-13 | 7 |
epithelial cell | 4.72e-10 | 25 |
brush border epithelial cell | 1.89e-07 | 6 |
gut absorptive cell | 1.89e-07 | 6 |
enterocyte | 1.89e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
tongue | 7.19e-11 | 1 |
gustatory system | 7.19e-11 | 1 |
future tongue | 7.19e-11 | 1 |
vagina | 8.99e-11 | 1 |
mucosa | 9.63e-11 | 15 |
egg chamber | 1.12e-10 | 1 |
orifice | 1.43e-08 | 5 |
intestinal mucosa | 1.96e-07 | 13 |
wall of intestine | 1.96e-07 | 13 |
gastrointestinal system mucosa | 1.96e-07 | 13 |
organ component layer | 7.78e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.