FFCP PHASE1:Mm9::chr9:110235906..110235939,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=235623|HGNC=|MCL_coexpression_id=1976|UniProt=Q6GQT6|association_with_transcript=46bp_to_ENSMUST00000098350_5end|description=CAGE_peak_1_at_Scap_5end|id=chr9:110235906..110235939,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!1.46e-10!25;UBERON:0002330!1.46e-10!25;UBERON:0005256!2.41e-10!47;UBERON:0009854!2.53e-09!23;UBERON:0009856!2.53e-09!23;UBERON:0002107!5.55e-09!22;UBERON:0007499!5.55e-09!22;UBERON:0006925!5.55e-09!22;UBERON:0009497!5.55e-09!22;UBERON:0000015!5.55e-09!22;UBERON:0002423!5.55e-09!22;UBERON:0006235!5.55e-09!22;UBERON:0008835!5.55e-09!22;UBERON:0003894!5.55e-09!22;UBERON:0004161!5.55e-09!22;UBERON:0008836!5.55e-09!22;UBERON:0004121!1.68e-08!102;UBERON:0000924!1.68e-08!102;UBERON:0006601!1.68e-08!102;UBERON:0000466!4.08e-07!79;UBERON:0007023!4.45e-07!51;UBERON:0002100!9.22e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0005256,2.52e-11,45;UBERON:0002365,1.46e-10,25;UBERON:0002330,1.46e-10,25;UBERON:0009854,2.53e-09,23;UBERON:0009856,2.53e-09,23;UBERON:0002107,5.55e-09,22;UBERON:0007499,5.55e-09,22;UBERON:0006925,5.55e-09,22;UBERON:0009497,5.55e-09,22;UBERON:0000015,5.55e-09,22;UBERON:0002423,5.55e-09,22;UBERON:0006235,5.55e-09,22;UBERON:0008835,5.55e-09,22;UBERON:0003894,5.55e-09,22;UBERON:0004161,5.55e-09,22;UBERON:0008836,5.55e-09,22;UBERON:0003104,4.40e-08,61;UBERON:0009142,4.40e-08,61;UBERON:0007023,4.45e-07,51|phase1_expression=4.48416771893423,3.48975407639361,6.82498859084304,9.98131897312539,10.0179145989269,4.8684988854448,3.97141489012394,2.96983643915625,20.4143647119917,19.6614202110475,5.30775701499065,7.57835510455696,3.93761678841773,3.93391810885488,2.99798785634096,2.02475267389826,2.09868563438444,4.41647031501533,1.91960207048034,1.27316895539409,10.2902381082794,9.4326403640841,10.1867917764185,5.91971964335605,7.34109699414944,4.59385571292016,4.30761996159075,3.23206849028834,8.17100703662408,5.29263272495855,5.32153225572731,12.065582795733,9.84103660135312,31.6963362030877,2.02196133825892,3.32469290716985,2.85837098767317,1.67412652294763,1.5626706890476,0,2.35292595212406,0.683045484958446,2.91306211818692,27.4455063186758,30.4130793658544,36.892897184498,37.5547845287059,27.9072200166972,28.1198313900124,21.1928589990969,15.9584520652913,40.250718022192,2.34895648480831,1.45072428402269,8.06625117941913,8.7468208252222,10.3152038377952,13.9231464914909,6.67644320836673,10.0508286061686,6.33831403506179,43.710944636918,16.8966011261116,7.64914759689189,9.88866362566974,9.9467216092454,41.9440154725767,66.0855485153074,4.14758449233911,4.86021377994086,2.73422449756797,13.7112472513826,12.1477697523387,3.1847607795888,4.50473713785711,1.83843757322004,7.70811166995721,11.6195477657521,11.8277030607307,9.36392642884376,9.14876436024097,3.64639359389732,11.725685958058,9.00420176050688,12.3766580699216,9.1334861496837,10.2507610175354,9.31997229126503,5.14938114665652,8.38844317185319,6.95674772884027,25.8127163094416,62.557362701113,71.2408212961919,77.3233936762726,67.2040330646003,20.2239964989723,8.862376774059,4.93593408745451,8.48014978824817,4.92951969218382,5.13305909657271,0,21.3320010945999,6.71122227134764,5.06719730950197,10.6160133453104,26.2622923353838,4.40194402200192,18.2583831049734,8.84775166507293,18.5723941770406,18.6798552777407,16.5794904607885,26.1046929841265,21.1119873433855,20.517182321953,15.1829324765907,7.07688441559899,4.04417124868523,5.07935492458905,4.84875253135222,16.775258509631,7.90508151931177,11.7290155815535,8.68553987709211,2.75574786363617,1.79970819298022,1.52484272487678,9.73639156131348,15.5550204958333,6.03140890141749,10.7771078519211,8.69432554923124,14.9607392082883,11.8436122039463,5.80484373946803,7.46441823660558,19.7123751578266,55.5566499540291,3.77349284591841,2.75882525320168,5.40186389416048,4.06903008156431,5.98721192531685,7.30248205623644,8.15205003669641,27.1638539275966,4.95806383745537,2.26927296201383,5.10258260075452,2.6303487891309,4.44875598760957,3.48252166522167,5.55611768301447,7.76233640592123,3.51106593656617,1.54408744268829,1.98914449576915,2.07125772535502,0.938104239924385,2.16074473753218,2.3674473558521,2.16440654922144,1.23413690309903,1.16266972375204,1.87791380979733,3.85325629811659,2.13927804887525,2.13417703302824,4.62092214411378,3.36259971078264,2.63460138349261,5.2340503316545,10.0939175310781,5.45394445610208,12.5559137533843,6.34681359992506,1.91959425481711,1.85789337488351,4.12375876230699,4.63872106633688,5.11469500843202,5.70676878337677,4.74529061544512,5.92916237006439,5.27803938480566,4.37704238490532,6.23885078781184,8.98819408654222,4.97117514711797,8.36393347668342,4.36236172192088,4.91268604221834,5.63538678365402,6.31319116320474,4.65485969202302,5.89140887078676,8.66340558602325,14.3181843540214,14.1298855057237,14.0672766870853,33.4991468608478,4.17112764290235,6.6830058338489,9.44420872016386,11.1573066763677,16.1588697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| ||
|EntrezGene=235623 | |||
|HGNC= | |||
|MCL_coexpression_id=1976 | |||
|UniProt=Q6GQT6 | |||
|association_with_transcript=46bp_to_ENSMUST00000098350_5end | |||
|description=CAGE_peak_1_at_Scap_5end | |||
|id=chr9:110235906..110235939,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!1.46e-10!25;UBERON:0002330!1.46e-10!25;UBERON:0005256!2.41e-10!47;UBERON:0009854!2.53e-09!23;UBERON:0009856!2.53e-09!23;UBERON:0002107!5.55e-09!22;UBERON:0007499!5.55e-09!22;UBERON:0006925!5.55e-09!22;UBERON:0009497!5.55e-09!22;UBERON:0000015!5.55e-09!22;UBERON:0002423!5.55e-09!22;UBERON:0006235!5.55e-09!22;UBERON:0008835!5.55e-09!22;UBERON:0003894!5.55e-09!22;UBERON:0004161!5.55e-09!22;UBERON:0008836!5.55e-09!22;UBERON:0004121!1.68e-08!102;UBERON:0000924!1.68e-08!102;UBERON:0006601!1.68e-08!102;UBERON:0000466!4.08e-07!79;UBERON:0007023!4.45e-07!51;UBERON:0002100!9.22e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,2.52e-11,45;UBERON:0002365,1.46e-10,25;UBERON:0002330,1.46e-10,25;UBERON:0009854,2.53e-09,23;UBERON:0009856,2.53e-09,23;UBERON:0002107,5.55e-09,22;UBERON:0007499,5.55e-09,22;UBERON:0006925,5.55e-09,22;UBERON:0009497,5.55e-09,22;UBERON:0000015,5.55e-09,22;UBERON:0002423,5.55e-09,22;UBERON:0006235,5.55e-09,22;UBERON:0008835,5.55e-09,22;UBERON:0003894,5.55e-09,22;UBERON:0004161,5.55e-09,22;UBERON:0008836,5.55e-09,22;UBERON:0003104,4.40e-08,61;UBERON:0009142,4.40e-08,61;UBERON:0007023,4.45e-07,51 | |||
|phase1_expression=4.48416771893423,3.48975407639361,6.82498859084304,9.98131897312539,10.0179145989269,4.8684988854448,3.97141489012394,2.96983643915625,20.4143647119917,19.6614202110475,5.30775701499065,7.57835510455696,3.93761678841773,3.93391810885488,2.99798785634096,2.02475267389826,2.09868563438444,4.41647031501533,1.91960207048034,1.27316895539409,10.2902381082794,9.4326403640841,10.1867917764185,5.91971964335605,7.34109699414944,4.59385571292016,4.30761996159075,3.23206849028834,8.17100703662408,5.29263272495855,5.32153225572731,12.065582795733,9.84103660135312,31.6963362030877,2.02196133825892,3.32469290716985,2.85837098767317,1.67412652294763,1.5626706890476,0,2.35292595212406,0.683045484958446,2.91306211818692,27.4455063186758,30.4130793658544,36.892897184498,37.5547845287059,27.9072200166972,28.1198313900124,21.1928589990969,15.9584520652913,40.250718022192,2.34895648480831,1.45072428402269,8.06625117941913,8.7468208252222,10.3152038377952,13.9231464914909,6.67644320836673,10.0508286061686,6.33831403506179,43.710944636918,16.8966011261116,7.64914759689189,9.88866362566974,9.9467216092454,41.9440154725767,66.0855485153074,4.14758449233911,4.86021377994086,2.73422449756797,13.7112472513826,12.1477697523387,3.1847607795888,4.50473713785711,1.83843757322004,7.70811166995721,11.6195477657521,11.8277030607307,9.36392642884376,9.14876436024097,3.64639359389732,11.725685958058,9.00420176050688,12.3766580699216,9.1334861496837,10.2507610175354,9.31997229126503,5.14938114665652,8.38844317185319,6.95674772884027,25.8127163094416,62.557362701113,71.2408212961919,77.3233936762726,67.2040330646003,20.2239964989723,8.862376774059,4.93593408745451,8.48014978824817,4.92951969218382,5.13305909657271,0,21.3320010945999,6.71122227134764,5.06719730950197,10.6160133453104,26.2622923353838,4.40194402200192,18.2583831049734,8.84775166507293,18.5723941770406,18.6798552777407,16.5794904607885,26.1046929841265,21.1119873433855,20.517182321953,15.1829324765907,7.07688441559899,4.04417124868523,5.07935492458905,4.84875253135222,16.775258509631,7.90508151931177,11.7290155815535,8.68553987709211,2.75574786363617,1.79970819298022,1.52484272487678,9.73639156131348,15.5550204958333,6.03140890141749,10.7771078519211,8.69432554923124,14.9607392082883,11.8436122039463,5.80484373946803,7.46441823660558,19.7123751578266,55.5566499540291,3.77349284591841,2.75882525320168,5.40186389416048,4.06903008156431,5.98721192531685,7.30248205623644,8.15205003669641,27.1638539275966,4.95806383745537,2.26927296201383,5.10258260075452,2.6303487891309,4.44875598760957,3.48252166522167,5.55611768301447,7.76233640592123,3.51106593656617,1.54408744268829,1.98914449576915,2.07125772535502,0.938104239924385,2.16074473753218,2.3674473558521,2.16440654922144,1.23413690309903,1.16266972375204,1.87791380979733,3.85325629811659,2.13927804887525,2.13417703302824,4.62092214411378,3.36259971078264,2.63460138349261,5.2340503316545,10.0939175310781,5.45394445610208,12.5559137533843,6.34681359992506,1.91959425481711,1.85789337488351,4.12375876230699,4.63872106633688,5.11469500843202,5.70676878337677,4.74529061544512,5.92916237006439,5.27803938480566,4.37704238490532,6.23885078781184,8.98819408654222,4.97117514711797,8.36393347668342,4.36236172192088,4.91268604221834,5.63538678365402,6.31319116320474,4.65485969202302,5.89140887078676,8.66340558602325,14.3181843540214,14.1298855057237,14.0672766870853,33.4991468608478,4.17112764290235,6.6830058338489,9.44420872016386,11.1573066763677,16.1588697034119,12.9859184408524,19.8510334841059,28.5357999124062,24.7105271869273,18.6898668485561,39.8190814005299,39.3167468124346,45.9693557863743,45.9257378616095,58.8581096063308,12.7479701214957,2.65287976478679,2.28150967018836,3.22515662972857,1.64283173801951,4.69017520837084,5.47500374037832,7.41507861859636,4.41378403497335,6.86540537911202,5.74037167166954,10.651115456523,5.35323443784276,7.37710198765709,10.5553898757491,1.08781136763742,50.1599558479417,24.5583704211212,12.36239542906,12.3072270921813,4.26230857979356,6.5642441073137,7.57219726599016,10.9322848403059,6.67812532971677,8.12493913038677,7.5751549188014,6.79383673893198,8.50102473517278,6.42962887404886,10.2774822266096,6.74774764485795,39.3174036026904,9.25941139069727,8.63300884573953,7.09371528781903,14.6019652173959,3.64170954232472,6.34879469625977,9.8074641473067,14.1744908582771,13.5271465095328,10.5955600198971,8.36127577798263,7.48644494607915,18.3301319602773,29.5172104009997,28.8779521094923,18.7241783164583,6.30213829109586,6.20921682157222,6.43011105094777,8.86701168211368,9.45354733290974,8.55654907131029,17.6589670486468,15.0189893160775,18.4293901651524,14.5548742716275,25.7222554588709,11.1410454420175,9.95163261314572,9.66915986425405,10.669158483429,7.57850175237612,15.9465759729038,3.93003025835061,4.54051109519089,3.70389054739423,4.70921142511728,2.7338845544205,3.66045077130436,3.22959016988325,4.75834937900437,4.97519905695926,23.8667654503778,3.63786392618306,6.30290348093231,4.3202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| |||
|short_description=p1@Scap | |||
}} |
Revision as of 16:55, 14 September 2013
Short description: | p1@Scap |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Scap_5end |
Coexpression cluster: | MCL_coexpression_mm9:1976 |
Association with transcript: | 46bp_to_ENSMUST00000098350_5end |
EntrezGene: | Scap |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 2.52e-11 | 45 |
exocrine gland | 1.46e-10 | 25 |
exocrine system | 1.46e-10 | 25 |
digestive tract diverticulum | 2.53e-09 | 23 |
sac | 2.53e-09 | 23 |
liver | 5.55e-09 | 22 |
epithelial sac | 5.55e-09 | 22 |
digestive gland | 5.55e-09 | 22 |
epithelium of foregut-midgut junction | 5.55e-09 | 22 |
anatomical boundary | 5.55e-09 | 22 |
hepatobiliary system | 5.55e-09 | 22 |
foregut-midgut junction | 5.55e-09 | 22 |
hepatic diverticulum | 5.55e-09 | 22 |
liver primordium | 5.55e-09 | 22 |
septum transversum | 5.55e-09 | 22 |
liver bud | 5.55e-09 | 22 |
mesenchyme | 4.40e-08 | 61 |
entire embryonic mesenchyme | 4.40e-08 | 61 |
adult organism | 4.45e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.