FFCP PHASE1:Mm9::chr7:52765770..52765783,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18220|HGNC=|MCL_coexpression_id=641|UniProt=Q02819|association_with_transcript=0bp_to_ENSMUST00000033096,NM_001163662,NM_008749,uc009gvm.2,uc009gvn.2,uc009gvo.2_5end|description=CAGE_peak_2_at_Nucb1_5end|id=chr7:52765770..52765783,-|ontology_enrichment_celltype=CL:0000055!7.02e-09!50;CL:0002321!4.50e-08!70;CL:0000220!4.50e-08!70;CL:0000221!2.69e-07!44;CL:0000133!2.69e-07!44;CL:0002319!6.98e-07!43|ontology_enrichment_celltype_v019_2=CL:0002321,4.34e-08,70;CL:0000221,2.69e-07,44;CL:0000133,2.69e-07,44;CL:0002319,6.98e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!9.20e-08!122;UBERON:0000025!2.86e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0004111,9.20e-08,122;UBERON:0000025,2.86e-07,114|phase1_expression=8.0074423552397,9.07336059862339,5.45999087267443,5.44435580352294,7.01254021924886,4.19698179779725,3.27057696833736,2.06597317506522,0.422366166455,0.936258105287974,1.71217968225505,0.319088635981346,1.19840510951844,1.48614684112296,1.66554880907831,1.82227740650843,0,1.57731082679119,1.37114433605739,0.42438965179803,7.48380953329414,1.98581902401771,0.261199789138935,4.15980299262857,9.86459908588831,4.01962374880514,4.73838195774982,6.46413698057667,9.5011709728187,6.80481350351813,7.98229838359097,1.27006134691926,1.23012957516914,0,2.59966457776147,3.65716219788683,3.26670970019791,2.92972141515835,3.1253413780952,4.18818995179039,5.88231488031014,3.41522742479223,4.85510353031154,9.19046771221714,9.52943153463437,7.89251034295231,34.4252191513137,10.247182349881,20.8701873597748,11.4713640453827,9.79904951377538,10.062679505548,1.67782606057736,0.725362142011344,2.01656279485478,5.91696702882678,17.7650732762029,9.28209766099396,6.47412674750713,6.34789175126439,2.53532561402472,16.2645375393183,15.1180115338894,26.996991518442,31.6437236021432,34.1030455174128,17.6764065205859,21.5162250980071,4.04389488003063,4.99521971827255,4.83747411108179,11.1403883917483,10.8225585066291,3.55223317723367,3.83381884072945,5.51531271966013,9.91042928994498,7.2781782708557,8.60196586234964,3.69281605644543,6.95306091378313,5.2091337055676,7.81712397203867,9.00420176050688,8.55670187550137,5.30331453852602,8.54230084794618,6.15118171223492,4.16494063332512,6.65029728939713,10.1452571045587,4.30211938490693,4.0798280022465,7.55584468292944,9.09686984426737,6.2723764193627,3.93244376368905,11.930122580464,5.19572009205738,7.77347063922748,9.43650912503759,8.98285341900225,7.64415719119937,0,3.24736561516821,2.53359865475099,2.02209778005913,5.25245846707676,3.36619248741323,6.08612770165782,6.7659277438793,4.87144765299426,7.14908041493781,6.63179618431539,5.76184664964954,9.92766071504436,10.3821886448437,8.96516012903452,0.884610551949874,5.50007289821191,5.52103796150984,3.39412677194655,1.86391761218122,4.39171195517321,5.44561437714983,2.81002760729451,3.11519323715393,1.19980546198682,3.68503658511888,4.49371918214468,3.20250421973039,5.40313714085317,4.17178368461463,4.34716277461562,4.57133698031032,5.19172041816825,8.55450656342657,6.09594155989456,8.33985102831127,4.62972082950243,3.6433724029557,4.82794419310293,4.32149111532838,3.76762044589288,4.28629944653366,2.94661556655154,5.15359485078509,2.32833033665114,1.29340795759705,2.45837904218165,3.34307135911503,6.1374805079721,6.39508673218875,5.2237824978325,6.58502836505419,5.57295947091781,0.702213187313235,3.3455227924913,3.9782889915383,4.14251545071004,6.80125573945179,6.84235833551856,4.49814997611899,5.1158700254325,3.08534225774756,4.41814495025775,6.17028823219124,2.80236821681207,4.93679549740441,4.76085645829376,5.02626619184305,7.01759939641595,4.83010253640311,5.63666958793561,4.20579897128254,5.35103984372279,8.92130714056255,3.96675849995316,2.98603550749328,5.10920678092965,3.22168653305233,3.42861991859682,2.00140239460383,4.1849637744763,4.74529061544512,6.0938613247884,6.78605063760728,5.96869416123452,5.8489226135736,2.69645822596266,4.97117514711797,4.58024928485045,4.1726938209678,5.59817711787671,6.76246414038483,4.48032921259691,3.68509725618489,4.62896411276103,7.33543830641385,5.01874503130647,6.27994911365499,6.16985819609003,4.44678940630723,3.50374722003798,2.55526693647164,2.9232074610031,2.02860121388503,3.13530307678142,4.58326533206556,5.4662266115654,2.43202840162553,3.84385978463314,5.75072826109418,8.55924179637558,6.24075346229121,6.06189307073068,4.4849353380478,5.78932225636041,5.72734889516475,4.16881105895066,4.23708938749267,5.43184274480602,4.45911471748154,4.69017520837084,5.47500374037832,5.85400943573396,8.51229778173431,7.9727288273559,9.8861956567642,4.91589944147214,8.63424909329478,7.95569822198314,19.6028669121054,9.24639662491806,1.47529281905711,4.13905119457099,5.29816946959713,6.56385444916338,3.11476396215683,4.54447668967871,4.41711507182759,6.63745865304285,3.87762115919038,5.73525115086125,8.68914828921337,4.81230102341015,4.45291771842384,4.09158201075837,5.53402889125133,5.46246237917072,3.69044221541498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| ||
|EntrezGene=18220 | |||
|HGNC= | |||
|MCL_coexpression_id=641 | |||
|UniProt=Q02819 | |||
|association_with_transcript=0bp_to_ENSMUST00000033096,NM_001163662,NM_008749,uc009gvm.2,uc009gvn.2,uc009gvo.2_5end | |||
|description=CAGE_peak_2_at_Nucb1_5end | |||
|id=chr7:52765770..52765783,- | |||
|ontology_enrichment_celltype=CL:0000055!7.02e-09!50;CL:0002321!4.50e-08!70;CL:0000220!4.50e-08!70;CL:0000221!2.69e-07!44;CL:0000133!2.69e-07!44;CL:0002319!6.98e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.34e-08,70;CL:0000221,2.69e-07,44;CL:0000133,2.69e-07,44;CL:0002319,6.98e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!9.20e-08!122;UBERON:0000025!2.86e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,9.20e-08,122;UBERON:0000025,2.86e-07,114 | |||
|phase1_expression=8.0074423552397,9.07336059862339,5.45999087267443,5.44435580352294,7.01254021924886,4.19698179779725,3.27057696833736,2.06597317506522,0.422366166455,0.936258105287974,1.71217968225505,0.319088635981346,1.19840510951844,1.48614684112296,1.66554880907831,1.82227740650843,0,1.57731082679119,1.37114433605739,0.42438965179803,7.48380953329414,1.98581902401771,0.261199789138935,4.15980299262857,9.86459908588831,4.01962374880514,4.73838195774982,6.46413698057667,9.5011709728187,6.80481350351813,7.98229838359097,1.27006134691926,1.23012957516914,0,2.59966457776147,3.65716219788683,3.26670970019791,2.92972141515835,3.1253413780952,4.18818995179039,5.88231488031014,3.41522742479223,4.85510353031154,9.19046771221714,9.52943153463437,7.89251034295231,34.4252191513137,10.247182349881,20.8701873597748,11.4713640453827,9.79904951377538,10.062679505548,1.67782606057736,0.725362142011344,2.01656279485478,5.91696702882678,17.7650732762029,9.28209766099396,6.47412674750713,6.34789175126439,2.53532561402472,16.2645375393183,15.1180115338894,26.996991518442,31.6437236021432,34.1030455174128,17.6764065205859,21.5162250980071,4.04389488003063,4.99521971827255,4.83747411108179,11.1403883917483,10.8225585066291,3.55223317723367,3.83381884072945,5.51531271966013,9.91042928994498,7.2781782708557,8.60196586234964,3.69281605644543,6.95306091378313,5.2091337055676,7.81712397203867,9.00420176050688,8.55670187550137,5.30331453852602,8.54230084794618,6.15118171223492,4.16494063332512,6.65029728939713,10.1452571045587,4.30211938490693,4.0798280022465,7.55584468292944,9.09686984426737,6.2723764193627,3.93244376368905,11.930122580464,5.19572009205738,7.77347063922748,9.43650912503759,8.98285341900225,7.64415719119937,0,3.24736561516821,2.53359865475099,2.02209778005913,5.25245846707676,3.36619248741323,6.08612770165782,6.7659277438793,4.87144765299426,7.14908041493781,6.63179618431539,5.76184664964954,9.92766071504436,10.3821886448437,8.96516012903452,0.884610551949874,5.50007289821191,5.52103796150984,3.39412677194655,1.86391761218122,4.39171195517321,5.44561437714983,2.81002760729451,3.11519323715393,1.19980546198682,3.68503658511888,4.49371918214468,3.20250421973039,5.40313714085317,4.17178368461463,4.34716277461562,4.57133698031032,5.19172041816825,8.55450656342657,6.09594155989456,8.33985102831127,4.62972082950243,3.6433724029557,4.82794419310293,4.32149111532838,3.76762044589288,4.28629944653366,2.94661556655154,5.15359485078509,2.32833033665114,1.29340795759705,2.45837904218165,3.34307135911503,6.1374805079721,6.39508673218875,5.2237824978325,6.58502836505419,5.57295947091781,0.702213187313235,3.3455227924913,3.9782889915383,4.14251545071004,6.80125573945179,6.84235833551856,4.49814997611899,5.1158700254325,3.08534225774756,4.41814495025775,6.17028823219124,2.80236821681207,4.93679549740441,4.76085645829376,5.02626619184305,7.01759939641595,4.83010253640311,5.63666958793561,4.20579897128254,5.35103984372279,8.92130714056255,3.96675849995316,2.98603550749328,5.10920678092965,3.22168653305233,3.42861991859682,2.00140239460383,4.1849637744763,4.74529061544512,6.0938613247884,6.78605063760728,5.96869416123452,5.8489226135736,2.69645822596266,4.97117514711797,4.58024928485045,4.1726938209678,5.59817711787671,6.76246414038483,4.48032921259691,3.68509725618489,4.62896411276103,7.33543830641385,5.01874503130647,6.27994911365499,6.16985819609003,4.44678940630723,3.50374722003798,2.55526693647164,2.9232074610031,2.02860121388503,3.13530307678142,4.58326533206556,5.4662266115654,2.43202840162553,3.84385978463314,5.75072826109418,8.55924179637558,6.24075346229121,6.06189307073068,4.4849353380478,5.78932225636041,5.72734889516475,4.16881105895066,4.23708938749267,5.43184274480602,4.45911471748154,4.69017520837084,5.47500374037832,5.85400943573396,8.51229778173431,7.9727288273559,9.8861956567642,4.91589944147214,8.63424909329478,7.95569822198314,19.6028669121054,9.24639662491806,1.47529281905711,4.13905119457099,5.29816946959713,6.56385444916338,3.11476396215683,4.54447668967871,4.41711507182759,6.63745865304285,3.87762115919038,5.73525115086125,8.68914828921337,4.81230102341015,4.45291771842384,4.09158201075837,5.53402889125133,5.46246237917072,3.69044221541498,9.61554259803178,7.32991317091092,4.28922319728592,0,4.12727081463468,4.83717691143602,5.65815239267694,4.13422650033082,4.30409207121498,7.23599220871019,5.45300594216258,7.12994756769443,2.21225730555071,6.32511651449993,3.09406629744561,7.14923172082955,2.52085531643834,7.1147276080515,6.43011105094777,4.96552654198366,7.31312152168489,8.88564711251453,8.22055362609418,7.74416636610244,11.4389318266463,5.95426674748397,4.45192882941996,4.03661066739764,4.88534691918062,5.96861720015682,5.25250879184196,4.37221254944776,5.00648315428376,3.07567585436135,8.46186158649212,4.25947412950337,1.69531611304222,1.36694227721025,1.60144721244566,1.5298058699447,2.23922323717853,1.65839968565309,5.72802370809068,1.58167996790568,7.31950081656655,4.75223499615926,5.22720740036172,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| |||
|short_description=p2@Nucb1 | |||
}} | |||
Revision as of 13:46, 14 September 2013
| Short description: | p2@Nucb1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Nucb1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:641 |
| Association with transcript: | 0bp_to_ENSMUST00000033096, NM_001163662, NM_008749, uc009gvm.2, uc009gvn.2, uc009gvo.2_5end |
| EntrezGene: | Nucb1 |
| Link to Zenbu: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic cell | 4.34e-08 | 70 |
| ectodermal cell | 2.69e-07 | 44 |
| neurectodermal cell | 2.69e-07 | 44 |
| neural cell | 6.98e-07 | 43 |
| Ontology term | p-value | n |
|---|---|---|
| anatomical conduit | 9.20e-08 | 122 |
| tube | 2.86e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
