FFCP PHASE1:Mm9::chr6:147996625..147996638,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:147996625..147996638,-|id=chr6:147996625..147996638,-|ontology_enrichment_celltype=CL:0000239!4.44e-20!6;CL:0000677!4.44e-20!6;CL:0000212!4.44e-20!6;CL:0000584!4.44e-20!6;CL:0002563!7.75e-19!9;CL:0002251!7.75e-19!9;CL:0000075!3.37e-17!7;CL:0000473!7.07e-16!3;CL:0000627!7.07e-16!3;CL:0000682!7.07e-16!3;CL:0000066!1.18e-14!25;CL:0002076!3.95e-11!15;CL:0000223!3.16e-08!20|ontology_enrichment_celltype_v019_2=CL:0000682,7.38e-28,3;CL:0000239,1.25e-23,6;CL:0000677,1.25e-23,6;CL:0000584,1.25e-23,6;CL:0000075,2.53e-20,7;CL:0000066,3.49e-17,25;CL:0002563,6.61e-16,9;CL:0002251,6.61e-16,9;CL:0000473,2.41e-12,7;CL:0002076,1.09e-09,15;CL:0000223,2.44e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.07e-24!15;UBERON:0003350!7.75e-19!9;UBERON:0004808!7.75e-19!9;UBERON:0001277!7.75e-19!9;UBERON:0001242!1.77e-17!13;UBERON:0000060!1.77e-17!13;UBERON:0001262!1.77e-17!13;UBERON:0004786!1.77e-17!13;UBERON:0000485!2.44e-15!11;UBERON:0004923!5.47e-15!24;UBERON:0001962!1.99e-10!2;UBERON:0001961!1.99e-10!2;UBERON:0001744!1.99e-10!2;UBERON:0000160!1.06e-07!43;UBERON:0002465!3.14e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.01e-28,15;UBERON:0001962,7.90e-18,2;UBERON:0001961,7.90e-18,2;UBERON:0001744,7.90e-18,2;UBERON:0004923,2.01e-17,24;UBERON:0001242,6.27e-17,13;UBERON:0001262,6.27e-17,13;UBERON:0004786,6.27e-17,13;UBERON:0003350,6.61e-16,9;UBERON:0004808,6.61e-16,9;UBERON:0001277,6.61e-16,9;UBERON:0000485,4.36e-13,11;UBERON:0002465,3.16e-12,3;UBERON:0003199,8.42e-10,1;UBERON:0000160,3.77e-07,31|phase1_expression=0,58.6278684834127,50.959914811628,0,0.500895729946347,38.7801118116465,45.5544649161275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.0385300219209,32.8055271926053,76.3728512272977,68.921919385452,116.785408115752,0,0,48.5589818335117,0,0,0,0,0,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:147996625..147996638,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:147996625..147996638,- | |||
|id=chr6:147996625..147996638,- | |||
|ontology_enrichment_celltype=CL:0000239!4.44e-20!6;CL:0000677!4.44e-20!6;CL:0000212!4.44e-20!6;CL:0000584!4.44e-20!6;CL:0002563!7.75e-19!9;CL:0002251!7.75e-19!9;CL:0000075!3.37e-17!7;CL:0000473!7.07e-16!3;CL:0000627!7.07e-16!3;CL:0000682!7.07e-16!3;CL:0000066!1.18e-14!25;CL:0002076!3.95e-11!15;CL:0000223!3.16e-08!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,7.38e-28,3;CL:0000239,1.25e-23,6;CL:0000677,1.25e-23,6;CL:0000584,1.25e-23,6;CL:0000075,2.53e-20,7;CL:0000066,3.49e-17,25;CL:0002563,6.61e-16,9;CL:0002251,6.61e-16,9;CL:0000473,2.41e-12,7;CL:0002076,1.09e-09,15;CL:0000223,2.44e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.07e-24!15;UBERON:0003350!7.75e-19!9;UBERON:0004808!7.75e-19!9;UBERON:0001277!7.75e-19!9;UBERON:0001242!1.77e-17!13;UBERON:0000060!1.77e-17!13;UBERON:0001262!1.77e-17!13;UBERON:0004786!1.77e-17!13;UBERON:0000485!2.44e-15!11;UBERON:0004923!5.47e-15!24;UBERON:0001962!1.99e-10!2;UBERON:0001961!1.99e-10!2;UBERON:0001744!1.99e-10!2;UBERON:0000160!1.06e-07!43;UBERON:0002465!3.14e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.01e-28,15;UBERON:0001962,7.90e-18,2;UBERON:0001961,7.90e-18,2;UBERON:0001744,7.90e-18,2;UBERON:0004923,2.01e-17,24;UBERON:0001242,6.27e-17,13;UBERON:0001262,6.27e-17,13;UBERON:0004786,6.27e-17,13;UBERON:0003350,6.61e-16,9;UBERON:0004808,6.61e-16,9;UBERON:0001277,6.61e-16,9;UBERON:0000485,4.36e-13,11;UBERON:0002465,3.16e-12,3;UBERON:0003199,8.42e-10,1;UBERON:0000160,3.77e-07,31 | |||
|phase1_expression=0,58.6278684834127,50.959914811628,0,0.500895729946347,38.7801118116465,45.5544649161275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.0385300219209,32.8055271926053,76.3728512272977,68.921919385452,116.785408115752,0,0,48.5589818335117,0,0,0,0,0,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:147996625..147996638,- | |||
}} |
Revision as of 09:24, 14 September 2013
Short description: | p@chr6:147996625..147996638, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:147996625..147996638, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 7.38e-28 | 3 |
brush border epithelial cell | 1.25e-23 | 6 |
gut absorptive cell | 1.25e-23 | 6 |
enterocyte | 1.25e-23 | 6 |
columnar/cuboidal epithelial cell | 2.53e-20 | 7 |
epithelial cell | 3.49e-17 | 25 |
intestinal epithelial cell | 6.61e-16 | 9 |
epithelial cell of alimentary canal | 6.61e-16 | 9 |
defensive cell | 2.41e-12 | 7 |
endo-epithelial cell | 1.09e-09 | 15 |
endodermal cell | 2.44e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.01e-28 | 15 |
gut-associated lymphoid tissue | 7.90e-18 | 2 |
mucosa-associated lymphoid tissue | 7.90e-18 | 2 |
lymphoid tissue | 7.90e-18 | 2 |
organ component layer | 2.01e-17 | 24 |
intestinal mucosa | 6.27e-17 | 13 |
wall of intestine | 6.27e-17 | 13 |
gastrointestinal system mucosa | 6.27e-17 | 13 |
epithelium of mucosa | 6.61e-16 | 9 |
gastrointestinal system epithelium | 6.61e-16 | 9 |
intestinal epithelium | 6.61e-16 | 9 |
simple columnar epithelium | 4.36e-13 | 11 |
lymphoid system | 3.16e-12 | 3 |
egg chamber | 8.42e-10 | 1 |
intestine | 3.77e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.