FFCP PHASE1:Mm9::chr6:30754298..30754311,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=145|UniProt=|association_with_transcript=-472bp_to_uc009bfw.1_5end|description=CAGE_peak_6_at_uc009bfw.1_5end|id=chr6:30754298..30754311,+|ontology_enrichment_celltype=CL:0000117!3.78e-13!23;CL:0000337!3.78e-13!23;CL:0000540!3.47e-07!33;CL:0000047!3.47e-07!33;CL:0000031!3.47e-07!33;CL:0000404!3.47e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,9.97e-16,23;CL:0000337,9.97e-16,23;CL:0000540,1.17e-09,33;CL:0000047,1.17e-09,33;CL:0000031,1.17e-09,33;CL:0000404,1.17e-09,33;CL:0000393,1.50e-07,39;CL:0000211,1.50e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!5.53e-18!34;UBERON:0001049!1.44e-17!52;UBERON:0005068!1.44e-17!52;UBERON:0006241!1.44e-17!52;UBERON:0007135!1.44e-17!52;UBERON:0000955!1.47e-16!50;UBERON:0006238!1.47e-16!50;UBERON:0002616!5.30e-16!49;UBERON:0001017!4.85e-15!73;UBERON:0005743!4.85e-15!73;UBERON:0000033!7.21e-15!63;UBERON:0002791!1.05e-14!29;UBERON:0003528!1.05e-14!29;UBERON:0001893!1.05e-14!29;UBERON:0002346!1.41e-14!71;UBERON:0003075!1.41e-14!71;UBERON:0007284!1.41e-14!71;UBERON:0000073!4.05e-14!75;UBERON:0001016!4.05e-14!75;UBERON:0003056!2.84e-13!49;UBERON:0003080!9.15e-13!40;UBERON:0002780!4.36e-12!39;UBERON:0001890!4.36e-12!39;UBERON:0006240!4.36e-12!39;UBERON:0004121!1.35e-11!102;UBERON:0000924!1.35e-11!102;UBERON:0006601!1.35e-11!102;UBERON:0002021!1.74e-09!10;UBERON:0000411!1.74e-09!10;UBERON:0001950!1.74e-09!10;UBERON:0000956!3.44e-09!21;UBERON:0001869!3.44e-09!21;UBERON:0000203!3.44e-09!21;UBERON:0000025!5.58e-09!114;UBERON:0002619!3.55e-08!17;UBERON:0004111!3.88e-07!122;UBERON:0002420!4.33e-07!8;UBERON:0007245!4.33e-07!8;UBERON:0010009!4.33e-07!8;UBERON:0010011!4.33e-07!8;UBERON:0000454!4.33e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.60e-26,54;UBERON:0002020,2.20e-24,34;UBERON:0001017,2.84e-24,73;UBERON:0001049,2.08e-23,52;UBERON:0005068,2.08e-23,52;UBERON:0006241,2.08e-23,52;UBERON:0007135,2.08e-23,52;UBERON:0001016,2.36e-23,75;UBERON:0002346,1.54e-21,64;UBERON:0003075,1.54e-21,64;UBERON:0007284,1.54e-21,64;UBERON:0003528,8.43e-20,29;UBERON:0002791,8.43e-20,29;UBERON:0001893,8.43e-20,29;UBERON:0004121,1.01e-19,95;UBERON:0000924,1.01e-19,95;UBERON:0006601,1.01e-19,95;UBERON:0000955,9.84e-19,47;UBERON:0006238,9.84e-19,47;UBERON:0002616,8.74e-18,46;UBERON:0010371,9.38e-18,73;UBERON:0003080,9.79e-18,40;UBERON:0002021,2.22e-17,10;UBERON:0000411,2.22e-17,10;UBERON:0001950,2.22e-17,10;UBERON:0003056,2.59e-17,49;UBERON:0002780,1.61e-16,39;UBERON:0001890,1.61e-16,39;UBERON:0006240,1.61e-16,39;UBERON:0010314,3.77e-13,92;UBERON:0002420,1.31e-12,8;UBERON:0007245,1.31e-12,8;UBERON:0010009,1.31e-12,8;UBERON:0010011,1.31e-12,8;UBERON:0000454,1.31e-12,8;UBERON:0002619,4.21e-11,17;UBERON:0000956,5.23e-10,21;UBERON:0001869,5.23e-10,21;UBERON:0000203,5.23e-10,21;UBERON:0000025,6.77e-10,114;UBERON:0004111,1.16e-08,122;UBERON:0000369,2.33e-08,5;UBERON:0002435,2.33e-08,5;UBERON:0000204,2.33e-08,5;UBERON:0010082,2.33e-08,5;UBERON:0002240,2.34e-07,6;UBERON:0005174,2.34e-07,6;UBERON:0001137,2.34e-07,6;UBERON:0002950,2.71e-07,4;UBERON:0001891,2.71e-07,4;UBERON:0009616,2.71e-07,4;UBERON:0010286,2.71e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,3.70293685490423,2.53532561402472,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0.210324961351382,1.42825492201902,0.441737081903227,0.857435594504678,0.575072826109418,0,7.70811166995721,5.2351808614927,10.752457327937,2.1101806036831,5.58074625974699,3.64639359389732,3.35019598801657,1.68828783009504,8.25110537994775,10.3120004915784,7.26095572075425,2.60959224155421,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608930956624282,0,0,0.470354828542819,0,0,0,0,0.485300549842228,0.220841518460394,0,0,0.878342391034642,0.628340120440365,0,0,0,0,4.04434726393021,2.74500361691176,2.76439574648302,1.91206752211504,4.85859368927628,2.90903262383384,3.24482526135515,0,0.124406970610093,0,0.210441855886474,0,0,0,1.35634336052144,0.476255494059295,1.15302348256365,0.281105173679186,1.81092359517311,0.215567992932842,0,0,0,0,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0.462801338662135,0.232533944750408,0.268273401399619,0.700592054203017,0.329119699826961,1.14917224855367,0.162137619091711,0.146199987425332,0,0,0.841159794256509,2.98423375899925,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0.198956472041151,0,0,0.216138049874694,0,0,0.456994050438915,0,0.203651327845314,0.193952487167626,0.280543279561274,0.126473074248515,0.442830443938806,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0.972811360650212,0,5.75072826109418,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0.238043640886014,1.56106918286239,0.630540576424764,2.87904096543407,1.59454768657487,0.983179888294428,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,2.56880943980467,5.39173758324135,0,0.504941854408746,0,0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| ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=145 | |||
|UniProt= | |||
|association_with_transcript=-472bp_to_uc009bfw.1_5end | |||
|description=CAGE_peak_6_at_uc009bfw.1_5end | |||
|id=chr6:30754298..30754311,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.78e-13!23;CL:0000337!3.78e-13!23;CL:0000540!3.47e-07!33;CL:0000047!3.47e-07!33;CL:0000031!3.47e-07!33;CL:0000404!3.47e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.97e-16,23;CL:0000337,9.97e-16,23;CL:0000540,1.17e-09,33;CL:0000047,1.17e-09,33;CL:0000031,1.17e-09,33;CL:0000404,1.17e-09,33;CL:0000393,1.50e-07,39;CL:0000211,1.50e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.53e-18!34;UBERON:0001049!1.44e-17!52;UBERON:0005068!1.44e-17!52;UBERON:0006241!1.44e-17!52;UBERON:0007135!1.44e-17!52;UBERON:0000955!1.47e-16!50;UBERON:0006238!1.47e-16!50;UBERON:0002616!5.30e-16!49;UBERON:0001017!4.85e-15!73;UBERON:0005743!4.85e-15!73;UBERON:0000033!7.21e-15!63;UBERON:0002791!1.05e-14!29;UBERON:0003528!1.05e-14!29;UBERON:0001893!1.05e-14!29;UBERON:0002346!1.41e-14!71;UBERON:0003075!1.41e-14!71;UBERON:0007284!1.41e-14!71;UBERON:0000073!4.05e-14!75;UBERON:0001016!4.05e-14!75;UBERON:0003056!2.84e-13!49;UBERON:0003080!9.15e-13!40;UBERON:0002780!4.36e-12!39;UBERON:0001890!4.36e-12!39;UBERON:0006240!4.36e-12!39;UBERON:0004121!1.35e-11!102;UBERON:0000924!1.35e-11!102;UBERON:0006601!1.35e-11!102;UBERON:0002021!1.74e-09!10;UBERON:0000411!1.74e-09!10;UBERON:0001950!1.74e-09!10;UBERON:0000956!3.44e-09!21;UBERON:0001869!3.44e-09!21;UBERON:0000203!3.44e-09!21;UBERON:0000025!5.58e-09!114;UBERON:0002619!3.55e-08!17;UBERON:0004111!3.88e-07!122;UBERON:0002420!4.33e-07!8;UBERON:0007245!4.33e-07!8;UBERON:0010009!4.33e-07!8;UBERON:0010011!4.33e-07!8;UBERON:0000454!4.33e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.60e-26,54;UBERON:0002020,2.20e-24,34;UBERON:0001017,2.84e-24,73;UBERON:0001049,2.08e-23,52;UBERON:0005068,2.08e-23,52;UBERON:0006241,2.08e-23,52;UBERON:0007135,2.08e-23,52;UBERON:0001016,2.36e-23,75;UBERON:0002346,1.54e-21,64;UBERON:0003075,1.54e-21,64;UBERON:0007284,1.54e-21,64;UBERON:0003528,8.43e-20,29;UBERON:0002791,8.43e-20,29;UBERON:0001893,8.43e-20,29;UBERON:0004121,1.01e-19,95;UBERON:0000924,1.01e-19,95;UBERON:0006601,1.01e-19,95;UBERON:0000955,9.84e-19,47;UBERON:0006238,9.84e-19,47;UBERON:0002616,8.74e-18,46;UBERON:0010371,9.38e-18,73;UBERON:0003080,9.79e-18,40;UBERON:0002021,2.22e-17,10;UBERON:0000411,2.22e-17,10;UBERON:0001950,2.22e-17,10;UBERON:0003056,2.59e-17,49;UBERON:0002780,1.61e-16,39;UBERON:0001890,1.61e-16,39;UBERON:0006240,1.61e-16,39;UBERON:0010314,3.77e-13,92;UBERON:0002420,1.31e-12,8;UBERON:0007245,1.31e-12,8;UBERON:0010009,1.31e-12,8;UBERON:0010011,1.31e-12,8;UBERON:0000454,1.31e-12,8;UBERON:0002619,4.21e-11,17;UBERON:0000956,5.23e-10,21;UBERON:0001869,5.23e-10,21;UBERON:0000203,5.23e-10,21;UBERON:0000025,6.77e-10,114;UBERON:0004111,1.16e-08,122;UBERON:0000369,2.33e-08,5;UBERON:0002435,2.33e-08,5;UBERON:0000204,2.33e-08,5;UBERON:0010082,2.33e-08,5;UBERON:0002240,2.34e-07,6;UBERON:0005174,2.34e-07,6;UBERON:0001137,2.34e-07,6;UBERON:0002950,2.71e-07,4;UBERON:0001891,2.71e-07,4;UBERON:0009616,2.71e-07,4;UBERON:0010286,2.71e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,3.70293685490423,2.53532561402472,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0.210324961351382,1.42825492201902,0.441737081903227,0.857435594504678,0.575072826109418,0,7.70811166995721,5.2351808614927,10.752457327937,2.1101806036831,5.58074625974699,3.64639359389732,3.35019598801657,1.68828783009504,8.25110537994775,10.3120004915784,7.26095572075425,2.60959224155421,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608930956624282,0,0,0.470354828542819,0,0,0,0,0.485300549842228,0.220841518460394,0,0,0.878342391034642,0.628340120440365,0,0,0,0,4.04434726393021,2.74500361691176,2.76439574648302,1.91206752211504,4.85859368927628,2.90903262383384,3.24482526135515,0,0.124406970610093,0,0.210441855886474,0,0,0,1.35634336052144,0.476255494059295,1.15302348256365,0.281105173679186,1.81092359517311,0.215567992932842,0,0,0,0,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0.462801338662135,0.232533944750408,0.268273401399619,0.700592054203017,0.329119699826961,1.14917224855367,0.162137619091711,0.146199987425332,0,0,0.841159794256509,2.98423375899925,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0.198956472041151,0,0,0.216138049874694,0,0,0.456994050438915,0,0.203651327845314,0.193952487167626,0.280543279561274,0.126473074248515,0.442830443938806,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0.972811360650212,0,5.75072826109418,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0.238043640886014,1.56106918286239,0.630540576424764,2.87904096543407,1.59454768657487,0.983179888294428,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,2.56880943980467,5.39173758324135,0,0.504941854408746,0,0,0,0,0.222798674082394,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0.727067458955011,0,0,0,0,0.340439605753788,0,0,0,0,0.356737635204141,0,0,0.23467170806371,0,0,0,0.161464426695906,0,0.238744688006273,0,0,6.11903496634682,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.404593039154462,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7302850097243,6.44455331110048,6.87474616127276,6.8741272937475,3.42541259885321,3.0215755895588,4.72515750162264,4.05289082901798,4.07828168085784,8.28416498802912,0.207574695168353,0.399024873401031,0.682934423016537,0.243106717068294,0,0,0,0.412070114477788,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0.468207537349412,0.512201219238954,0.631790158511746,0,0.927074607558844,0.38581844092741,0,1.61918812147837,2.05721551431249,2.30718548007139,0.715308569841963,0.581385666529314,1.03520318456864,0.507687647350059,1.28049581010941,2.89376682581627,1.22223702461276,1.12228454331548,0.474540072496697,1.28055827088233,0.818462086339379,1.39443157067369,0.964533054905707,0.999242311751784,0.233931608445408,1.28922632428979,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p6@uc009bfw.1 | |||
}} |
Revision as of 09:37, 14 September 2013
Short description: | p6@uc009bfw.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_uc009bfw.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | -472bp_to_uc009bfw.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.97e-16 | 23 |
neuroblast (sensu Vertebrata) | 9.97e-16 | 23 |
neuron | 1.17e-09 | 33 |
neuronal stem cell | 1.17e-09 | 33 |
neuroblast | 1.17e-09 | 33 |
electrically signaling cell | 1.17e-09 | 33 |
electrically responsive cell | 1.50e-07 | 39 |
electrically active cell | 1.50e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.