FFCP PHASE1:Mm9::chr7:111392963..111392974,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=94094|HGNC=|UniProt=F8VPK2,Q99PP6|association_with_transcript=0bp_to_ENSMUST00000060315,ENSMUST00000106849,NM_030684,uc009ivr.1,uc009ivs.1,uc009ivt.1,uc009ivu.1_5end|description=CAGE_peak_3_at_Trim34a_5end|id=chr7:111392963..111392974,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.160148847104794,0.697950815278722,0,0.30246421130683,0,0.33575854382378,0,0.258246646883153,0.140788722151667,0,0,0.159544317990673,0.513602189793617,0.874204024189974,0.666219523631325,0,0,0.630924330716475,1.37114433605739,0.84877930359606,0.425216450755349,0.198581902401771,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,2.09265815368454,0.7813353445238,0.523523743973798,0.588231488031014,0,1.45653105909346,0.503587271902309,0.101376931219515,0.183546752161682,0,0,0,0,0.139986421625363,0,0.671130424230945,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0,0,0.151452386666368,0.377857800533928,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.432982082022428,0,0,0,0.776813650941515,0.29688427812965,0,0,0,0,0.352766121407114,0.376999773989026,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.509196819251581,0.497627882440372,0,0.631325567659422,0.260240885925407,0,0,0.30140963567143,0.0680364991513279,0,0,0,0,0.189106080167819,0,0,0,0,0.411564272815887,0,0,0,0,0.414251545071004,0,0.180062061461015,0,0,0,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.324275238183423,0.146199987425332,0,0.536825675041487,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.252946148497029,0.442830443938806,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0.324270453550071,0.549122826376163,0,0,0.312037673114561,1.01031551178845,0.538192240565737,0,0,0.189491411770485,0,0,0,0,0,0.585400943573396,0.472905432318573,0.664394068946325,0.159454768657487,1.3109065177259,0.172684981865896,0.433947175744535,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0.377210159511796,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0,0,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0,0,0.740778109478847,0.188368457004691,0.27338845544205,0.228778173206523,0.339956859987711,0.139951452323658,0,0,0,0,0,0.418176592028937,0,0,0.165306911450672,0.26175594198403,0.129614973291793,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0,0.337912250981556,0.352071715937262,0.2604087696879,0.943734099831398,0.241584120826006,0,0,0,0.308132871494482,0.129920822977795,0,0,0.721172697119813,0.443068581523732,0.706765149637033,1.447929326445,0.907435666231565,1.07203668813728,0.865906574762965,1.8700304349051,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0.377252682772152,0.280924522409647,0.0640251524048693,0.114870937911227,0.476293691283074,0.115884325944855,0,0.412085900803307,0,0,0,0.715308569841963,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0|short_description=p3@Trim34a}} | ||
|EntrezGene=94094 | |||
|HGNC= | |||
|UniProt=F8VPK2,Q99PP6 | |||
|association_with_transcript=0bp_to_ENSMUST00000060315,ENSMUST00000106849,NM_030684,uc009ivr.1,uc009ivs.1,uc009ivt.1,uc009ivu.1_5end | |||
|description=CAGE_peak_3_at_Trim34a_5end | |||
|id=chr7:111392963..111392974,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.160148847104794,0.697950815278722,0,0.30246421130683,0,0.33575854382378,0,0.258246646883153,0.140788722151667,0,0,0.159544317990673,0.513602189793617,0.874204024189974,0.666219523631325,0,0,0.630924330716475,1.37114433605739,0.84877930359606,0.425216450755349,0.198581902401771,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,2.09265815368454,0.7813353445238,0.523523743973798,0.588231488031014,0,1.45653105909346,0.503587271902309,0.101376931219515,0.183546752161682,0,0,0,0,0.139986421625363,0,0.671130424230945,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0,0,0.151452386666368,0.377857800533928,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.432982082022428,0,0,0,0.776813650941515,0.29688427812965,0,0,0,0,0.352766121407114,0.376999773989026,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.509196819251581,0.497627882440372,0,0.631325567659422,0.260240885925407,0,0,0.30140963567143,0.0680364991513279,0,0,0,0,0.189106080167819,0,0,0,0,0.411564272815887,0,0,0,0,0.414251545071004,0,0.180062061461015,0,0,0,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.324275238183423,0.146199987425332,0,0.536825675041487,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.252946148497029,0.442830443938806,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0.324270453550071,0.549122826376163,0,0,0.312037673114561,1.01031551178845,0.538192240565737,0,0,0.189491411770485,0,0,0,0,0,0.585400943573396,0.472905432318573,0.664394068946325,0.159454768657487,1.3109065177259,0.172684981865896,0.433947175744535,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0.377210159511796,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0,0,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0,0,0.740778109478847,0.188368457004691,0.27338845544205,0.228778173206523,0.339956859987711,0.139951452323658,0,0,0,0,0,0.418176592028937,0,0,0.165306911450672,0.26175594198403,0.129614973291793,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0,0.337912250981556,0.352071715937262,0.2604087696879,0.943734099831398,0.241584120826006,0,0,0,0.308132871494482,0.129920822977795,0,0,0.721172697119813,0.443068581523732,0.706765149637033,1.447929326445,0.907435666231565,1.07203668813728,0.865906574762965,1.8700304349051,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0.377252682772152,0.280924522409647,0.0640251524048693,0.114870937911227,0.476293691283074,0.115884325944855,0,0.412085900803307,0,0,0,0.715308569841963,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p3@Trim34a | |||
}} | |||
Revision as of 11:23, 14 September 2013
| Short description: | p3@Trim34a |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Trim34a_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000060315, ENSMUST00000106849, NM_030684, uc009ivr.1, uc009ivs.1, uc009ivt.1, uc009ivu.1_5end |
| EntrezGene: | Trim34a |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
