FFCP PHASE1:Mm9::chr6:31038438..31038445,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=112|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:31038438..31038445,-|id=chr6:31038438..31038445,-|ontology_enrichment_celltype=CL:0000192!4.27e-12!3;CL:0000359!4.27e-12!3;CL:0002539!4.27e-12!3;CL:0000514!4.27e-12!3;CL:0000055!1.08e-10!50;CL:0000680!2.54e-10!6;CL:0000183!2.54e-10!6;CL:0000187!2.54e-10!6;CL:0000056!2.54e-10!6;CL:0002321!1.32e-09!70;CL:0000220!1.32e-09!70;CL:0000325!2.55e-09!2;CL:0000217!2.55e-09!2;CL:0000328!2.55e-09!2;CL:0002573!2.55e-09!2;CL:0002376!2.55e-09!2;CL:0000218!2.55e-09!2;CL:0000692!2.55e-09!2;CL:0002377!2.55e-09!2;CL:0002375!2.55e-09!2;CL:0000222!7.33e-09!7;CL:0000548!1.44e-07!115;CL:0000004!1.44e-07!115;CL:0000255!1.44e-07!115;CL:0002371!2.74e-07!118;CL:0000107!3.05e-07!9;CL:0000144!5.04e-07!121;CL:0000012!5.04e-07!121;CL:0000355!6.59e-07!9|ontology_enrichment_celltype_v019_2=CL:0000217,1.66e-44,2;CL:0000328,1.66e-44,2;CL:0002573,1.66e-44,2;CL:0002376,1.66e-44,2;CL:0000218,1.66e-44,2;CL:0000692,1.66e-44,2;CL:0002377,1.66e-44,2;CL:0002375,1.66e-44,2;CL:0000215,4.03e-30,3;CL:0000107,1.26e-10,9;CL:0000333,7.63e-10,10;CL:0000095,7.63e-10,10;CL:0000243,7.63e-10,10;CL:0000123,7.63e-10,10;CL:0000125,7.63e-10,10;CL:0000030,7.63e-10,10;CL:0000339,7.63e-10,10;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!9.06e-13!11;UBERON:0001135!4.27e-12!3;UBERON:0004237!4.27e-12!3;UBERON:0004695!4.27e-12!3;UBERON:0002111!4.27e-12!3;UBERON:0004178!4.27e-12!3;UBERON:0000947!3.45e-09!4;UBERON:0001637!3.45e-09!4;UBERON:0003509!3.45e-09!4;UBERON:0004573!3.45e-09!4;UBERON:0004571!3.45e-09!4;UBERON:0010191!3.45e-09!4;UBERON:0004572!3.45e-09!4;UBERON:0000055!1.95e-07!5;UBERON:0001981!1.95e-07!5;UBERON:0002049!1.95e-07!5;UBERON:0007500!1.95e-07!5;UBERON:0007798!1.95e-07!5;UBERON:0004537!1.95e-07!5;UBERON:0006965!1.95e-07!5;UBERON:0002410!3.05e-07!9;UBERON:0001134!6.59e-07!9;UBERON:0002036!6.59e-07!9;UBERON:0002385!6.59e-07!9;UBERON:0000486!6.59e-07!9;UBERON:0001015!6.59e-07!9;UBERON:0004290!6.59e-07!9;UBERON:0003082!6.59e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000010,3.07e-32,11;UBERON:0000011,1.54e-29,3;UBERON:0002410,1.26e-10,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.367093504323363,0,0.218025156380447,0,0,0.419959264876088,0,0,0,0,0.257259436035947,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18050011999373,3.55186332501892,0,0,0,0.539703191637817,0,0,0,0.511290967734173,0,0.35333957451034,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55959071857676,1.13230612315533,0,0.292255857911312,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0|short_description=p@chr6:31038438..31038445,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=112 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:31038438..31038445,- | |||
|id=chr6:31038438..31038445,- | |||
|ontology_enrichment_celltype=CL:0000192!4.27e-12!3;CL:0000359!4.27e-12!3;CL:0002539!4.27e-12!3;CL:0000514!4.27e-12!3;CL:0000055!1.08e-10!50;CL:0000680!2.54e-10!6;CL:0000183!2.54e-10!6;CL:0000187!2.54e-10!6;CL:0000056!2.54e-10!6;CL:0002321!1.32e-09!70;CL:0000220!1.32e-09!70;CL:0000325!2.55e-09!2;CL:0000217!2.55e-09!2;CL:0000328!2.55e-09!2;CL:0002573!2.55e-09!2;CL:0002376!2.55e-09!2;CL:0000218!2.55e-09!2;CL:0000692!2.55e-09!2;CL:0002377!2.55e-09!2;CL:0002375!2.55e-09!2;CL:0000222!7.33e-09!7;CL:0000548!1.44e-07!115;CL:0000004!1.44e-07!115;CL:0000255!1.44e-07!115;CL:0002371!2.74e-07!118;CL:0000107!3.05e-07!9;CL:0000144!5.04e-07!121;CL:0000012!5.04e-07!121;CL:0000355!6.59e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000217,1.66e-44,2;CL:0000328,1.66e-44,2;CL:0002573,1.66e-44,2;CL:0002376,1.66e-44,2;CL:0000218,1.66e-44,2;CL:0000692,1.66e-44,2;CL:0002377,1.66e-44,2;CL:0002375,1.66e-44,2;CL:0000215,4.03e-30,3;CL:0000107,1.26e-10,9;CL:0000333,7.63e-10,10;CL:0000095,7.63e-10,10;CL:0000243,7.63e-10,10;CL:0000123,7.63e-10,10;CL:0000125,7.63e-10,10;CL:0000030,7.63e-10,10;CL:0000339,7.63e-10,10;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!9.06e-13!11;UBERON:0001135!4.27e-12!3;UBERON:0004237!4.27e-12!3;UBERON:0004695!4.27e-12!3;UBERON:0002111!4.27e-12!3;UBERON:0004178!4.27e-12!3;UBERON:0000947!3.45e-09!4;UBERON:0001637!3.45e-09!4;UBERON:0003509!3.45e-09!4;UBERON:0004573!3.45e-09!4;UBERON:0004571!3.45e-09!4;UBERON:0010191!3.45e-09!4;UBERON:0004572!3.45e-09!4;UBERON:0000055!1.95e-07!5;UBERON:0001981!1.95e-07!5;UBERON:0002049!1.95e-07!5;UBERON:0007500!1.95e-07!5;UBERON:0007798!1.95e-07!5;UBERON:0004537!1.95e-07!5;UBERON:0006965!1.95e-07!5;UBERON:0002410!3.05e-07!9;UBERON:0001134!6.59e-07!9;UBERON:0002036!6.59e-07!9;UBERON:0002385!6.59e-07!9;UBERON:0000486!6.59e-07!9;UBERON:0001015!6.59e-07!9;UBERON:0004290!6.59e-07!9;UBERON:0003082!6.59e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,3.07e-32,11;UBERON:0000011,1.54e-29,3;UBERON:0002410,1.26e-10,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.367093504323363,0,0.218025156380447,0,0,0.419959264876088,0,0,0,0,0.257259436035947,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18050011999373,3.55186332501892,0,0,0,0.539703191637817,0,0,0,0.511290967734173,0,0.35333957451034,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55959071857676,1.13230612315533,0,0.292255857911312,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr6:31038438..31038445,- | |||
}} |
Revision as of 09:38, 14 September 2013
Short description: | p@chr6:31038438..31038445, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:31038438..31038445, - |
Coexpression cluster: | MCL_coexpression_mm9:112 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 1.66e-44 | 2 |
myelin accumulating cell | 1.66e-44 | 2 |
Schwann cell | 1.66e-44 | 2 |
non-myelinating Schwann cell | 1.66e-44 | 2 |
myelinating Schwann cell;;Schwann cell | 1.66e-44 | 2 |
terminal Schwann cell | 1.66e-44 | 2 |
immature Schwann cell | 1.66e-44 | 2 |
Schwann cell precursor | 1.66e-44 | 2 |
barrier cell | 4.03e-30 | 3 |
autonomic neuron | 1.26e-10 | 9 |
migratory neural crest cell | 7.63e-10 | 10 |
neuron associated cell | 7.63e-10 | 10 |
glial cell (sensu Vertebrata) | 7.63e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 7.63e-10 | 10 |
glial cell | 7.63e-10 | 10 |
glioblast | 7.63e-10 | 10 |
glioblast (sensu Vertebrata) | 7.63e-10 | 10 |
neural cell | 6.31e-09 | 43 |
ectodermal cell | 9.66e-09 | 44 |
neurectodermal cell | 9.66e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 3.07e-32 | 11 |
parasympathetic nervous system | 1.54e-29 | 3 |
autonomic nervous system | 1.26e-10 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.