FFCP PHASE1:Mm9::chr1:55420578..55420600,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=75388|HGNC=|MCL_coexpression_id=118|UniProt=Q924M5,E9QPQ9|association_with_transcript=-265bp_to_ENSMUST00000159398,NM_029267,uc007bal.1,uc007bam.1_5end|description=CAGE_peak_2_at_Boll_5end|id=chr1:55420578..55420600,-|ontology_enrichment_celltype=CL:0000791!2.13e-12!9;CL:0000789!2.13e-12!9;CL:0002420!2.13e-12!9;CL:0002419!2.13e-12!9;CL:0000790!2.13e-12!9;CL:0000624!3.87e-11!8;CL:0000084!1.30e-09!11;CL:0000827!1.30e-09!11;CL:0000893!1.03e-08!6;CL:0002489!1.03e-08!6;CL:0000898!1.03e-08!6;CL:0000809!1.03e-08!6;CL:0000810!1.03e-08!6;CL:0000895!1.03e-08!6;CL:0000808!1.03e-08!6;CL:0000894!1.03e-08!6;CL:0000806!1.03e-08!6;CL:0000807!1.03e-08!6;CL:0000805!1.03e-08!6;CL:0002425!1.03e-08!6;CL:0002436!1.03e-08!6;CL:0002427!1.03e-08!6;CL:0002428!1.03e-08!6;CL:0002429!1.03e-08!6;CL:0002433!1.03e-08!6;CL:0002431!1.03e-08!6;CL:0002432!1.03e-08!6;CL:0000838!1.42e-08!12;CL:0000542!1.06e-07!13;CL:0000051!1.06e-07!13|ontology_enrichment_celltype_v019_2=CL:0000791,5.41e-36,9;CL:0000789,5.41e-36,9;CL:0002420,5.41e-36,9;CL:0002419,5.41e-36,9;CL:0000790,5.41e-36,9;CL:0000624,5.70e-32,8;CL:0000084,3.32e-29,11;CL:0000827,3.32e-29,11;CL:0000838,1.17e-26,12;CL:0000542,1.68e-24,13;CL:0000051,1.68e-24,13;CL:0000893,2.97e-24,6;CL:0002489,2.97e-24,6;CL:0000898,2.97e-24,6;CL:0000809,2.97e-24,6;CL:0000810,2.97e-24,6;CL:0000895,2.97e-24,6;CL:0000808,2.97e-24,6;CL:0000894,2.97e-24,6;CL:0000806,2.97e-24,6;CL:0000807,2.97e-24,6;CL:0000805,2.97e-24,6;CL:0002425,2.97e-24,6;CL:0002436,2.97e-24,6;CL:0002427,2.97e-24,6;CL:0002428,2.97e-24,6;CL:0002429,2.97e-24,6;CL:0002433,2.97e-24,6;CL:0002431,2.97e-24,6;CL:0002432,2.97e-24,6;CL:0000738,2.08e-18,17;CL:0002087,2.08e-18,17;CL:0002031,4.64e-12,25;CL:0000988,4.17e-09,32;CL:0002032,4.17e-09,32;CL:0000037,4.17e-09,32;CL:0000837,4.17e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!5.69e-15!23;UBERON:0000974!5.69e-15!23;UBERON:0004807!5.69e-15!23;UBERON:0005058!5.69e-15!23;UBERON:0003351!5.69e-15!23;UBERON:0009113!5.69e-15!23;UBERON:0003295!5.69e-15!23;UBERON:0009722!5.69e-15!23;UBERON:0005562!5.69e-15!23;UBERON:0007690!5.69e-15!23;UBERON:0004177!1.14e-14!29;UBERON:0006562!4.42e-14!24;UBERON:0003408!4.42e-14!24;UBERON:0001557!4.42e-14!24;UBERON:0001042!4.42e-14!24;UBERON:0008814!4.42e-14!24;UBERON:0009145!4.42e-14!24;UBERON:0002193!5.79e-13!48;UBERON:0000072!8.04e-12!27;UBERON:0002390!9.07e-12!45;UBERON:0003061!9.07e-12!45;UBERON:0000063!8.85e-08!35;UBERON:0003929!7.06e-07!55;UBERON:0002405!8.29e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.29e-35,23;UBERON:0000974,1.29e-35,23;UBERON:0004807,1.29e-35,23;UBERON:0005058,1.29e-35,23;UBERON:0003351,1.29e-35,23;UBERON:0009113,1.29e-35,23;UBERON:0003295,1.29e-35,23;UBERON:0009722,1.29e-35,23;UBERON:0005562,1.29e-35,23;UBERON:0007690,1.29e-35,23;UBERON:0006562,5.04e-34,24;UBERON:0003408,5.04e-34,24;UBERON:0001557,5.04e-34,24;UBERON:0001042,5.04e-34,24;UBERON:0008814,5.04e-34,24;UBERON:0009145,5.04e-34,24;UBERON:0000072,5.91e-30,27;UBERON:0004177,1.04e-27,29;UBERON:0005057,1.04e-27,29;UBERON:0000077,1.67e-22,35;UBERON:0007811,8.33e-22,36;UBERON:0000065,8.05e-19,41;UBERON:0001004,2.62e-18,42;UBERON:0002193,4.42e-18,48;UBERON:0002405,4.42e-18,48;UBERON:0000153,8.05e-18,43;UBERON:0002390,6.57e-17,45;UBERON:0003061,6.57e-17,45;UBERON:0003929,2.42e-13,55;UBERON:0002368,5.28e-12,60;UBERON:0000949,5.42e-11,72;UBERON:0002530,7.17e-11,65;UBERON:0000490,1.15e-10,66;UBERON:0005911,4.41e-10,69;UBERON:0001041,2.55e-08,80;UBERON:0003081,1.98e-07,87|phase1_expression=0,0.697950815278722,0,0,0.500895729946347,0.671517087647559,0.700837921786577,3.61545305636414,3.09735188733667,6.08567768437183,1.54096171402954,4.62678522172951,3.59521532855532,3.84649770643589,0,0.202475267389826,0,0.630924330716475,0.274228867211478,0.42438965179803,0.510259740906419,0,0,0.799962113967033,0,1.14846392823004,0.86152399231815,0.646413698057667,0,0,0.665191531965914,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35217285206807,6.04968838456435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.33044095282455,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0.136072998302656,0.12811372028485,0,0,0,0,0,0.43839146485515,0,0.348252166522167,0,0.199034266818493,0,0.257347907114715,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0,0,0,0.214337035031592,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0.164140899745061,0,0,0.51261264239355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| ||
|EntrezGene=75388 | |||
|HGNC= | |||
|MCL_coexpression_id=118 | |||
|UniProt=Q924M5,E9QPQ9 | |||
|association_with_transcript=-265bp_to_ENSMUST00000159398,NM_029267,uc007bal.1,uc007bam.1_5end | |||
|description=CAGE_peak_2_at_Boll_5end | |||
|id=chr1:55420578..55420600,- | |||
|ontology_enrichment_celltype=CL:0000791!2.13e-12!9;CL:0000789!2.13e-12!9;CL:0002420!2.13e-12!9;CL:0002419!2.13e-12!9;CL:0000790!2.13e-12!9;CL:0000624!3.87e-11!8;CL:0000084!1.30e-09!11;CL:0000827!1.30e-09!11;CL:0000893!1.03e-08!6;CL:0002489!1.03e-08!6;CL:0000898!1.03e-08!6;CL:0000809!1.03e-08!6;CL:0000810!1.03e-08!6;CL:0000895!1.03e-08!6;CL:0000808!1.03e-08!6;CL:0000894!1.03e-08!6;CL:0000806!1.03e-08!6;CL:0000807!1.03e-08!6;CL:0000805!1.03e-08!6;CL:0002425!1.03e-08!6;CL:0002436!1.03e-08!6;CL:0002427!1.03e-08!6;CL:0002428!1.03e-08!6;CL:0002429!1.03e-08!6;CL:0002433!1.03e-08!6;CL:0002431!1.03e-08!6;CL:0002432!1.03e-08!6;CL:0000838!1.42e-08!12;CL:0000542!1.06e-07!13;CL:0000051!1.06e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.41e-36,9;CL:0000789,5.41e-36,9;CL:0002420,5.41e-36,9;CL:0002419,5.41e-36,9;CL:0000790,5.41e-36,9;CL:0000624,5.70e-32,8;CL:0000084,3.32e-29,11;CL:0000827,3.32e-29,11;CL:0000838,1.17e-26,12;CL:0000542,1.68e-24,13;CL:0000051,1.68e-24,13;CL:0000893,2.97e-24,6;CL:0002489,2.97e-24,6;CL:0000898,2.97e-24,6;CL:0000809,2.97e-24,6;CL:0000810,2.97e-24,6;CL:0000895,2.97e-24,6;CL:0000808,2.97e-24,6;CL:0000894,2.97e-24,6;CL:0000806,2.97e-24,6;CL:0000807,2.97e-24,6;CL:0000805,2.97e-24,6;CL:0002425,2.97e-24,6;CL:0002436,2.97e-24,6;CL:0002427,2.97e-24,6;CL:0002428,2.97e-24,6;CL:0002429,2.97e-24,6;CL:0002433,2.97e-24,6;CL:0002431,2.97e-24,6;CL:0002432,2.97e-24,6;CL:0000738,2.08e-18,17;CL:0002087,2.08e-18,17;CL:0002031,4.64e-12,25;CL:0000988,4.17e-09,32;CL:0002032,4.17e-09,32;CL:0000037,4.17e-09,32;CL:0000837,4.17e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!5.69e-15!23;UBERON:0000974!5.69e-15!23;UBERON:0004807!5.69e-15!23;UBERON:0005058!5.69e-15!23;UBERON:0003351!5.69e-15!23;UBERON:0009113!5.69e-15!23;UBERON:0003295!5.69e-15!23;UBERON:0009722!5.69e-15!23;UBERON:0005562!5.69e-15!23;UBERON:0007690!5.69e-15!23;UBERON:0004177!1.14e-14!29;UBERON:0006562!4.42e-14!24;UBERON:0003408!4.42e-14!24;UBERON:0001557!4.42e-14!24;UBERON:0001042!4.42e-14!24;UBERON:0008814!4.42e-14!24;UBERON:0009145!4.42e-14!24;UBERON:0002193!5.79e-13!48;UBERON:0000072!8.04e-12!27;UBERON:0002390!9.07e-12!45;UBERON:0003061!9.07e-12!45;UBERON:0000063!8.85e-08!35;UBERON:0003929!7.06e-07!55;UBERON:0002405!8.29e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.29e-35,23;UBERON:0000974,1.29e-35,23;UBERON:0004807,1.29e-35,23;UBERON:0005058,1.29e-35,23;UBERON:0003351,1.29e-35,23;UBERON:0009113,1.29e-35,23;UBERON:0003295,1.29e-35,23;UBERON:0009722,1.29e-35,23;UBERON:0005562,1.29e-35,23;UBERON:0007690,1.29e-35,23;UBERON:0006562,5.04e-34,24;UBERON:0003408,5.04e-34,24;UBERON:0001557,5.04e-34,24;UBERON:0001042,5.04e-34,24;UBERON:0008814,5.04e-34,24;UBERON:0009145,5.04e-34,24;UBERON:0000072,5.91e-30,27;UBERON:0004177,1.04e-27,29;UBERON:0005057,1.04e-27,29;UBERON:0000077,1.67e-22,35;UBERON:0007811,8.33e-22,36;UBERON:0000065,8.05e-19,41;UBERON:0001004,2.62e-18,42;UBERON:0002193,4.42e-18,48;UBERON:0002405,4.42e-18,48;UBERON:0000153,8.05e-18,43;UBERON:0002390,6.57e-17,45;UBERON:0003061,6.57e-17,45;UBERON:0003929,2.42e-13,55;UBERON:0002368,5.28e-12,60;UBERON:0000949,5.42e-11,72;UBERON:0002530,7.17e-11,65;UBERON:0000490,1.15e-10,66;UBERON:0005911,4.41e-10,69;UBERON:0001041,2.55e-08,80;UBERON:0003081,1.98e-07,87 | |||
|phase1_expression=0,0.697950815278722,0,0,0.500895729946347,0.671517087647559,0.700837921786577,3.61545305636414,3.09735188733667,6.08567768437183,1.54096171402954,4.62678522172951,3.59521532855532,3.84649770643589,0,0.202475267389826,0,0.630924330716475,0.274228867211478,0.42438965179803,0.510259740906419,0,0,0.799962113967033,0,1.14846392823004,0.86152399231815,0.646413698057667,0,0,0.665191531965914,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35217285206807,6.04968838456435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.33044095282455,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0.136072998302656,0.12811372028485,0,0,0,0,0,0.43839146485515,0,0.348252166522167,0,0.199034266818493,0,0.257347907114715,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0,0,0,0.214337035031592,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0.164140899745061,0,0,0.512612642393558,0,0,0,0.136694227721025,0.457556346413045,0.679913719975421,0.419854356970974,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0.149516546043979,0,0,0,0,0.234714477291508,0.39061315453185,1.57289016638566,1.44950472495604,0.864090018773596,2.21207784439725,0.202725215290164,0,0,0.358053391334963,0.993406773906324,1.08175904567972,1.32920574457119,1.31256384932592,1.82896335972,1.00826185136841,1.8516997340553,1.44317762460494,4.32444538071805,0,0,0.179427713218951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p2@Boll | |||
}} |
Revision as of 20:33, 13 September 2013
Short description: | p2@Boll |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Boll_5end |
Coexpression cluster: | MCL_coexpression_mm9:118 |
Association with transcript: | -265bp_to_ENSMUST00000159398, NM_029267, uc007bal.1, uc007bam.1_5end |
EntrezGene: | Boll |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.