FFCP PHASE1:Mm9::chr7:19110105..19110113,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:19110105..19110113,-|id=chr7:19110105..19110113,-|ontology_enrichment_celltype=CL:0000473!3.80e-27!3;CL:0000627!3.80e-27!3;CL:0000682!3.80e-27!3;CL:0000239!4.26e-24!6;CL:0000677!4.26e-24!6;CL:0000212!4.26e-24!6;CL:0000584!4.26e-24!6;CL:0000075!1.01e-20!7;CL:0000066!3.49e-17!25;CL:0002563!3.24e-16!9;CL:0002251!3.24e-16!9;CL:0002076!7.13e-10!15;CL:0000223!1.78e-07!20|ontology_enrichment_celltype_v019_2=CL:0000682,2.80e-33,3;CL:0000239,1.22e-29,6;CL:0000677,1.22e-29,6;CL:0000584,1.22e-29,6;CL:0000075,1.71e-25,7;CL:0000066,1.81e-21,25;CL:0002563,5.87e-20,9;CL:0002251,5.87e-20,9;CL:0000473,9.96e-15,7;CL:0002076,3.59e-12,15;CL:0000223,3.13e-09,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.75e-21!15;UBERON:0001962!3.56e-18!2;UBERON:0001961!3.56e-18!2;UBERON:0001744!3.56e-18!2;UBERON:0003350!3.24e-16!9;UBERON:0004808!3.24e-16!9;UBERON:0001277!3.24e-16!9;UBERON:0000485!2.44e-13!11;UBERON:0004923!3.81e-13!24;UBERON:0002465!1.86e-12!3;UBERON:0001242!2.42e-11!13;UBERON:0000060!2.42e-11!13;UBERON:0001262!2.42e-11!13;UBERON:0004786!2.42e-11!13;UBERON:0003199!4.59e-10!1|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.87e-20,9;UBERON:0004808,5.87e-20,9;UBERON:0001277,5.87e-20,9;UBERON:0000344,1.77e-18,15;UBERON:0000485,2.00e-16,11;UBERON:0001242,5.65e-14,13;UBERON:0001262,5.65e-14,13;UBERON:0004786,5.65e-14,13;UBERON:0003199,4.30e-12,1;UBERON:0004923,1.18e-11,24|phase1_expression=0,8.37540978334467,3.63999391511629,0,0,2.68606835059024,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,1.37645568640302,1.14846392823004,3.4460959692726,7.75696437669201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:19110105..19110113,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:19110105..19110113,- | |||
|id=chr7:19110105..19110113,- | |||
|ontology_enrichment_celltype=CL:0000473!3.80e-27!3;CL:0000627!3.80e-27!3;CL:0000682!3.80e-27!3;CL:0000239!4.26e-24!6;CL:0000677!4.26e-24!6;CL:0000212!4.26e-24!6;CL:0000584!4.26e-24!6;CL:0000075!1.01e-20!7;CL:0000066!3.49e-17!25;CL:0002563!3.24e-16!9;CL:0002251!3.24e-16!9;CL:0002076!7.13e-10!15;CL:0000223!1.78e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.80e-33,3;CL:0000239,1.22e-29,6;CL:0000677,1.22e-29,6;CL:0000584,1.22e-29,6;CL:0000075,1.71e-25,7;CL:0000066,1.81e-21,25;CL:0002563,5.87e-20,9;CL:0002251,5.87e-20,9;CL:0000473,9.96e-15,7;CL:0002076,3.59e-12,15;CL:0000223,3.13e-09,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.75e-21!15;UBERON:0001962!3.56e-18!2;UBERON:0001961!3.56e-18!2;UBERON:0001744!3.56e-18!2;UBERON:0003350!3.24e-16!9;UBERON:0004808!3.24e-16!9;UBERON:0001277!3.24e-16!9;UBERON:0000485!2.44e-13!11;UBERON:0004923!3.81e-13!24;UBERON:0002465!1.86e-12!3;UBERON:0001242!2.42e-11!13;UBERON:0000060!2.42e-11!13;UBERON:0001262!2.42e-11!13;UBERON:0004786!2.42e-11!13;UBERON:0003199!4.59e-10!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.87e-20,9;UBERON:0004808,5.87e-20,9;UBERON:0001277,5.87e-20,9;UBERON:0000344,1.77e-18,15;UBERON:0000485,2.00e-16,11;UBERON:0001242,5.65e-14,13;UBERON:0001262,5.65e-14,13;UBERON:0004786,5.65e-14,13;UBERON:0003199,4.30e-12,1;UBERON:0004923,1.18e-11,24 | |||
|phase1_expression=0,8.37540978334467,3.63999391511629,0,0,2.68606835059024,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,1.37645568640302,1.14846392823004,3.4460959692726,7.75696437669201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:19110105..19110113,- | |||
}} |
Revision as of 12:38, 14 September 2013
Short description: | p@chr7:19110105..19110113, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:19110105..19110113, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.80e-33 | 3 |
brush border epithelial cell | 1.22e-29 | 6 |
gut absorptive cell | 1.22e-29 | 6 |
enterocyte | 1.22e-29 | 6 |
columnar/cuboidal epithelial cell | 1.71e-25 | 7 |
epithelial cell | 1.81e-21 | 25 |
intestinal epithelial cell | 5.87e-20 | 9 |
epithelial cell of alimentary canal | 5.87e-20 | 9 |
defensive cell | 9.96e-15 | 7 |
endo-epithelial cell | 3.59e-12 | 15 |
endodermal cell | 3.13e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 5.87e-20 | 9 |
gastrointestinal system epithelium | 5.87e-20 | 9 |
intestinal epithelium | 5.87e-20 | 9 |
mucosa | 1.77e-18 | 15 |
simple columnar epithelium | 2.00e-16 | 11 |
intestinal mucosa | 5.65e-14 | 13 |
wall of intestine | 5.65e-14 | 13 |
gastrointestinal system mucosa | 5.65e-14 | 13 |
egg chamber | 4.30e-12 | 1 |
organ component layer | 1.18e-11 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.