FFCP PHASE1:Mm9::chr17:24664870..24664880,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=224619|HGNC=|MCL_coexpression_id=255|UniProt=F8WJF7,Q8C2K8,Q922B6|association_with_transcript=2bp_to_NM_001172113,NM_001172114,NM_153792,uc008awq.2,uc008awr.2,uc008aws.2,uc012aml.1_5end|description=CAGE_peak_4_at_Traf7_5end|id=chr17:24664870..24664880,-|ontology_enrichment_celltype=CL:0002031!1.06e-08!25;CL:0000988!8.16e-08!32;CL:0002032!8.16e-08!32;CL:0000037!8.16e-08!32;CL:0000566!8.16e-08!32;CL:0000837!8.16e-08!32;CL:0000219!4.41e-07!54;CL:0002320!9.25e-07!46;CL:0000134!9.25e-07!46|ontology_enrichment_celltype_v019_2=CL:0002031,6.46e-10,25;CL:0000219,5.78e-09,54;CL:0002320,2.00e-08,46;CL:0000134,2.00e-08,46;CL:0000839,2.20e-08,13;CL:0000988,9.28e-08,32;CL:0002032,9.28e-08,32;CL:0000037,9.28e-08,32;CL:0000837,9.28e-08,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!9.25e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.00e-08,46|phase1_expression=0.160148847104794,1.04692622291808,0.909998478779072,0.90739263392049,0,0.33575854382378,0.700837921786577,1.29123323441576,0.422366166455,0.468129052643987,2.73948749160808,1.7549874978974,0.684802919724823,0.786783621770977,1.66554880907831,1.01237633694913,1.39912375625629,0.788655413395594,0.685572168028694,0.84877930359606,0.595303031057488,0.496454756004426,1.56719873483361,1.11994695955385,1.14704640533585,0.57423196411502,0.430761996159075,1.07735616342945,0.760093677825496,0.252030129759931,0.665191531965914,9.52546010189447,12.916360539276,15.8481681015439,0.288851619751275,0.332469290716985,0.612508068787107,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0.971020706062307,0.125896817975577,0.304130793658544,0.367093504323363,1.56478268869608,0.65407546914134,1.31811709640683,0.194429899074283,0.279972843250725,2.87505128729943,0.838913030288682,2.90144856804538,1.34437519656986,1.02903774414379,1.14613375975503,0,0.202316460859598,0,0,0,1.77858959222228,1.3498495759221,1.97773272513395,3.5524005747305,1.19840044207362,1.92109152660777,0.311068836925433,0.135005938331691,0.630974884054146,0.285650984403804,1.10434270475807,0.367472397644862,0.766763768145891,2.75765635983006,0,0.255374676170375,0.614426133024974,0.395658863190582,0.640413505216868,1.56274011167028,0.558365998002762,0.56276261003168,0.30559649555362,0,0.284743361598206,0.186399445825301,0.681535739998656,0.377857800533928,0.579728977403356,0,0,0.539703191637817,0.649776417447669,0,0.702222100658759,2.72688516124892,0.519572009205738,0.35333957451034,0.14084341977668,2.56652954828636,0,0,2.16491041011214,3.29367825117628,1.01104889002957,0.45673551887624,0.776813650941515,0.148442139064825,0.520455980298408,0.608930956624282,0.230615497256059,1.20578112442098,0.117588707135705,0.251333182659351,0.988779870937496,0.289198713839823,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0.878342391034642,0.209446706813455,1.02182822083437,1.1981512450592,0.599902730993408,0.508280908292259,0.149790639404823,0.915001205637253,0.251308704225729,0.521472960576829,0,0.41557608911912,0.811206315338788,0.203678727700633,0.124406970610093,0.505445516867349,0.420883711772948,0.650602214813519,0.689706313300419,0.720248519221397,0.60281927134286,0.340182495756639,0.512454881139399,0.281105173679186,0.517406741478031,1.07783996466421,0.378212160335639,0,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0.772043721344145,0.852490498186778,0.414251545071004,1.87620847984877,0.36012412292203,0.473489471170421,0.393528463494808,0.308534225774757,0,1.07309360559848,0.116765342367169,0.16455984991348,0,0,0.292399974850665,0.439100230582101,0.268412837520744,0,0.205809224758569,0.660837565967596,2.3800550999719,0.426576501070468,0.928946687441754,0.38660238396628,1.21010114774006,0,0.380451252225118,0.949058123089023,0.329397909448022,0.251335208800269,0,0.779856348476481,0.898819408654221,0.648414149624083,0.199141273254367,0.379335801906163,0.456994050438915,3.38123207019241,0.610953983535943,0.193952487167626,0.140271639780637,0.252946148497029,0.147610147979602,0.31399745568275,0,0.296452627087149,1.16791574001266,2.94838492669805,0.449724224769707,0.811440485554012,2.41177159752417,0.50925170356284,0.575392274901621,0.324270453550071,0.274561413188081,0,0.744281895337007,0.312037673114561,0.252578877947112,0.538192240565737,0.482443521363367,1.10851914099963,0.568474235311454,0.651859905768103,0.509235257325564,0.938760993154008,0.837531287209079,0.238043640886014,0.390267295715598,0.945810864637146,0.44292937929755,0.318909537314974,0.491589944147214,0.172684981865896,0.578596234326046,1.50791283939272,1.08781136763742,0.983528546038072,0.275936746304732,0.321101179975584,0.234423373184406,2.95082901678016,0.252470927204373,0,0.390438744296638,0.215423397732799,1.19484398976276,0.445597348164788,0,0.809621403349789,0,0.790575555893047,0,0.425820255624806,0.534196811001766,0.488660878060728,0.164970122972535,0,0.971122544619926,0.906970670894253,1.32023555829129,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| ||
|EntrezGene=224619 | |||
|HGNC= | |||
|MCL_coexpression_id=255 | |||
|UniProt=F8WJF7,Q8C2K8,Q922B6 | |||
|association_with_transcript=2bp_to_NM_001172113,NM_001172114,NM_153792,uc008awq.2,uc008awr.2,uc008aws.2,uc012aml.1_5end | |||
|description=CAGE_peak_4_at_Traf7_5end | |||
|id=chr17:24664870..24664880,- | |||
|ontology_enrichment_celltype=CL:0002031!1.06e-08!25;CL:0000988!8.16e-08!32;CL:0002032!8.16e-08!32;CL:0000037!8.16e-08!32;CL:0000566!8.16e-08!32;CL:0000837!8.16e-08!32;CL:0000219!4.41e-07!54;CL:0002320!9.25e-07!46;CL:0000134!9.25e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,6.46e-10,25;CL:0000219,5.78e-09,54;CL:0002320,2.00e-08,46;CL:0000134,2.00e-08,46;CL:0000839,2.20e-08,13;CL:0000988,9.28e-08,32;CL:0002032,9.28e-08,32;CL:0000037,9.28e-08,32;CL:0000837,9.28e-08,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!9.25e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.00e-08,46 | |||
|phase1_expression=0.160148847104794,1.04692622291808,0.909998478779072,0.90739263392049,0,0.33575854382378,0.700837921786577,1.29123323441576,0.422366166455,0.468129052643987,2.73948749160808,1.7549874978974,0.684802919724823,0.786783621770977,1.66554880907831,1.01237633694913,1.39912375625629,0.788655413395594,0.685572168028694,0.84877930359606,0.595303031057488,0.496454756004426,1.56719873483361,1.11994695955385,1.14704640533585,0.57423196411502,0.430761996159075,1.07735616342945,0.760093677825496,0.252030129759931,0.665191531965914,9.52546010189447,12.916360539276,15.8481681015439,0.288851619751275,0.332469290716985,0.612508068787107,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0.971020706062307,0.125896817975577,0.304130793658544,0.367093504323363,1.56478268869608,0.65407546914134,1.31811709640683,0.194429899074283,0.279972843250725,2.87505128729943,0.838913030288682,2.90144856804538,1.34437519656986,1.02903774414379,1.14613375975503,0,0.202316460859598,0,0,0,1.77858959222228,1.3498495759221,1.97773272513395,3.5524005747305,1.19840044207362,1.92109152660777,0.311068836925433,0.135005938331691,0.630974884054146,0.285650984403804,1.10434270475807,0.367472397644862,0.766763768145891,2.75765635983006,0,0.255374676170375,0.614426133024974,0.395658863190582,0.640413505216868,1.56274011167028,0.558365998002762,0.56276261003168,0.30559649555362,0,0.284743361598206,0.186399445825301,0.681535739998656,0.377857800533928,0.579728977403356,0,0,0.539703191637817,0.649776417447669,0,0.702222100658759,2.72688516124892,0.519572009205738,0.35333957451034,0.14084341977668,2.56652954828636,0,0,2.16491041011214,3.29367825117628,1.01104889002957,0.45673551887624,0.776813650941515,0.148442139064825,0.520455980298408,0.608930956624282,0.230615497256059,1.20578112442098,0.117588707135705,0.251333182659351,0.988779870937496,0.289198713839823,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0.878342391034642,0.209446706813455,1.02182822083437,1.1981512450592,0.599902730993408,0.508280908292259,0.149790639404823,0.915001205637253,0.251308704225729,0.521472960576829,0,0.41557608911912,0.811206315338788,0.203678727700633,0.124406970610093,0.505445516867349,0.420883711772948,0.650602214813519,0.689706313300419,0.720248519221397,0.60281927134286,0.340182495756639,0.512454881139399,0.281105173679186,0.517406741478031,1.07783996466421,0.378212160335639,0,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0.772043721344145,0.852490498186778,0.414251545071004,1.87620847984877,0.36012412292203,0.473489471170421,0.393528463494808,0.308534225774757,0,1.07309360559848,0.116765342367169,0.16455984991348,0,0,0.292399974850665,0.439100230582101,0.268412837520744,0,0.205809224758569,0.660837565967596,2.3800550999719,0.426576501070468,0.928946687441754,0.38660238396628,1.21010114774006,0,0.380451252225118,0.949058123089023,0.329397909448022,0.251335208800269,0,0.779856348476481,0.898819408654221,0.648414149624083,0.199141273254367,0.379335801906163,0.456994050438915,3.38123207019241,0.610953983535943,0.193952487167626,0.140271639780637,0.252946148497029,0.147610147979602,0.31399745568275,0,0.296452627087149,1.16791574001266,2.94838492669805,0.449724224769707,0.811440485554012,2.41177159752417,0.50925170356284,0.575392274901621,0.324270453550071,0.274561413188081,0,0.744281895337007,0.312037673114561,0.252578877947112,0.538192240565737,0.482443521363367,1.10851914099963,0.568474235311454,0.651859905768103,0.509235257325564,0.938760993154008,0.837531287209079,0.238043640886014,0.390267295715598,0.945810864637146,0.44292937929755,0.318909537314974,0.491589944147214,0.172684981865896,0.578596234326046,1.50791283939272,1.08781136763742,0.983528546038072,0.275936746304732,0.321101179975584,0.234423373184406,2.95082901678016,0.252470927204373,0,0.390438744296638,0.215423397732799,1.19484398976276,0.445597348164788,0,0.809621403349789,0,0.790575555893047,0,0.425820255624806,0.534196811001766,0.488660878060728,0.164970122972535,0,0.971122544619926,0.906970670894253,1.32023555829129,0.295301892880773,0.307435147943927,0.516856586336442,0,0.356497378384721,0,1.05418608574999,0,0.340439605753788,0.18006109403131,0.646793418913773,0.857348140126369,0,0,0.164549020602121,0.608929898229199,1.17335854031855,1.0591603543191,0,0.8244312647074,0.484393280087717,0.361877549568935,0.358117032009409,0.656563598980245,0,0.556275906031529,1.19609616558497,0.82554747185289,0.370389054739423,0.753473828018764,1.23024804948923,1.37266903923914,0.509935289981566,0.139951452323658,0.276399947608848,0,1.73984796469624,0.406638934253697,0.432021363287205,0.209088296014469,0.218362563746178,0.269728692769641,0.495920734352016,0.26175594198403,0.129614973291793,0,1.12738587736838,0.747582730219894,0.165458490457098,0.583353565032143,0.258319646955462,0.506868376472335,0.234714477291508,0.13020438484395,0.838874755405687,1.93267296660805,0,0.948033361884535,0,0.616265742988964,0.649604114888975,0.716106782669926,0.5960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| |||
|short_description=p4@Traf7 | |||
}} | |||
Revision as of 13:42, 13 September 2013
| Short description: | p4@Traf7 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Traf7_5end |
| Coexpression cluster: | MCL_coexpression_mm9:255 |
| Association with transcript: | 2bp_to_NM_001172113, NM_001172114, NM_153792, uc008awq.2, uc008awr.2, uc008aws.2, uc012aml.1_5end |
| EntrezGene: | Traf7 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic lineage restricted progenitor cell | 6.46e-10 | 25 |
| motile cell | 5.78e-09 | 54 |
| connective tissue cell | 2.00e-08 | 46 |
| mesenchymal cell | 2.00e-08 | 46 |
| myeloid lineage restricted progenitor cell | 2.20e-08 | 13 |
| hematopoietic cell | 9.28e-08 | 32 |
| hematopoietic oligopotent progenitor cell | 9.28e-08 | 32 |
| hematopoietic stem cell | 9.28e-08 | 32 |
| hematopoietic multipotent progenitor cell | 9.28e-08 | 32 |
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 2.00e-08 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
