FFCP PHASE1:Mm9::chr18:38114719..38114776,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=225392|HGNC=|MCL_coexpression_id=1|UniProt=Q8BRJ3,Q8CFT0|association_with_transcript=-436bp_to_ENSMUST00000070709,NM_153793,uc008erm.2,uc008ern.2_5end|description=CAGE_peak_2_at_Rell2_5end|id=chr18:38114719..38114776,+|ontology_enrichment_celltype=CL:0000117!1.32e-13!23;CL:0000337!1.32e-13!23;CL:0000540!9.76e-12!33;CL:0000047!9.76e-12!33;CL:0000031!9.76e-12!33;CL:0000404!9.76e-12!33;CL:0000221!6.26e-09!44;CL:0000133!6.26e-09!44;CL:0002319!1.29e-08!43;CL:0000393!2.36e-08!39;CL:0000211!2.36e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.28e-19,23;CL:0000337,3.28e-19,23;CL:0000540,5.52e-12,33;CL:0000047,5.52e-12,33;CL:0000031,5.52e-12,33;CL:0000404,5.52e-12,33;CL:0000393,6.68e-09,39;CL:0000211,6.68e-09,39;CL:0000221,8.85e-08,44;CL:0000133,8.85e-08,44;CL:0002319,2.26e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.32e-23!73;UBERON:0005743!1.32e-23!73;UBERON:0000073!1.44e-23!75;UBERON:0001016!1.44e-23!75;UBERON:0002346!6.62e-22!71;UBERON:0003075!6.62e-22!71;UBERON:0007284!6.62e-22!71;UBERON:0001049!7.90e-22!52;UBERON:0005068!7.90e-22!52;UBERON:0006241!7.90e-22!52;UBERON:0007135!7.90e-22!52;UBERON:0000033!7.33e-21!63;UBERON:0000955!3.00e-20!50;UBERON:0006238!3.00e-20!50;UBERON:0004121!3.54e-20!102;UBERON:0000924!3.54e-20!102;UBERON:0006601!3.54e-20!102;UBERON:0002616!1.06e-19!49;UBERON:0003056!6.19e-18!49;UBERON:0002020!5.50e-17!34;UBERON:0003080!1.08e-16!40;UBERON:0007811!1.59e-16!86;UBERON:0002780!5.41e-16!39;UBERON:0001890!5.41e-16!39;UBERON:0006240!5.41e-16!39;UBERON:0000153!2.02e-14!94;UBERON:0002791!9.52e-14!29;UBERON:0003528!9.52e-14!29;UBERON:0001893!9.52e-14!29;UBERON:0000956!2.64e-09!21;UBERON:0001869!2.64e-09!21;UBERON:0000203!2.64e-09!21;UBERON:0002619!2.19e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.81e-32,54;UBERON:0002346,4.00e-31,64;UBERON:0003075,4.00e-31,64;UBERON:0007284,4.00e-31,64;UBERON:0001049,1.67e-30,52;UBERON:0005068,1.67e-30,52;UBERON:0006241,1.67e-30,52;UBERON:0007135,1.67e-30,52;UBERON:0001017,1.09e-27,73;UBERON:0001016,1.98e-26,75;UBERON:0010371,3.93e-26,73;UBERON:0000955,4.28e-25,47;UBERON:0006238,4.28e-25,47;UBERON:0002020,1.66e-24,34;UBERON:0002616,2.85e-24,46;UBERON:0004121,5.35e-24,95;UBERON:0000924,5.35e-24,95;UBERON:0006601,5.35e-24,95;UBERON:0003056,1.70e-23,49;UBERON:0003080,4.38e-22,40;UBERON:0002780,4.97e-21,39;UBERON:0001890,4.97e-21,39;UBERON:0006240,4.97e-21,39;UBERON:0003528,1.79e-19,29;UBERON:0002791,1.79e-19,29;UBERON:0001893,1.79e-19,29;UBERON:0010314,1.32e-17,92;UBERON:0000956,1.35e-12,21;UBERON:0001869,1.35e-12,21;UBERON:0000203,1.35e-12,21;UBERON:0002619,1.21e-09,17;UBERON:0002021,1.32e-09,10;UBERON:0000411,1.32e-09,10;UBERON:0001950,1.32e-09,10;UBERON:0003076,9.19e-09,12;UBERON:0003057,9.19e-09,12;UBERON:0002420,2.87e-08,8;UBERON:0007245,2.87e-08,8;UBERON:0010009,2.87e-08,8;UBERON:0010011,2.87e-08,8;UBERON:0000454,2.87e-08,8;UBERON:0002240,1.93e-07,6;UBERON:0005174,1.93e-07,6;UBERON:0001137,1.93e-07,6|phase1_expression=0.960893082628764,0.348975407639361,0,0.30246421130683,0,0.503637815735669,0,1.80772652818207,2.111830832275,1.40438715793196,1.88339765048055,0.638177271962691,2.39681021903688,2.18551006047494,0.333109761815663,0.404950534779652,0,1.26184866143295,1.09691546884591,0.84877930359606,1.19060606211498,0.297872853602656,0.522399578277871,0.319984845586813,0.45881856213434,0,0,0.215471232685889,0.570070258369122,0.504060259519861,0,0,0,0,0.577703239502549,0.166234645358492,0.408338712524738,0.837063261473815,0,0.523523743973798,0,0,0,0,0.304130793658544,0.367093504323363,0,0.436050312760893,0.439372365468944,0.194429899074283,0.279972843250725,0,1.51004345451963,2.17608642603403,0.672187598284928,0.257259436035947,0.286533439938757,0,3.23706337375356,10.0508286061686,2.53532561402472,0,0,0,0.988866362566974,0.7104801149461,0.898800331555214,0.768436610643109,3.00699875694585,4.45519596494579,3.36519938162211,13.9968982357864,8.61387309711293,3.1847607795888,4.50473713785711,0.919218786610021,5.50579404996943,7.91661496128164,8.44835932909339,3.69281605644543,6.31264740856627,4.68822033501084,10.8881369610539,6.19038871034848,6.1119299110724,5.30331453852602,6.40672563595963,7.26957838718672,0.454357159999104,0.982430281388212,2.02905142091174,0,0,0.539703191637817,0,0,0.280888840263504,0.511290967734173,1.03914401841148,0.35333957451034,1.69012103732017,0,0,0,0.216491041011214,0,0,0.5709193985953,0.258937883647172,0.29688427812965,0.520455980298408,0.913396434936424,0,0.301445281105245,1.05829836422134,0.628332956648377,0.247194967734374,0,0,0.647067399789637,0.220841518460394,0.484875253135222,0,6.73395833126558,4.39838084308256,0,0.838705871541442,0.599902730993408,0.635351135365324,12.1330417917906,4.11750542536764,5.40313714085317,5.73620256634512,6.64860189058859,9.55825004973976,7.13861557498134,0.203678727700633,0.124406970610093,1.0108910337347,1.68353484709179,0.260240885925407,1.14951052216736,0.720248519221397,1.50704817835715,1.4287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| ||
|EntrezGene=225392 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8BRJ3,Q8CFT0 | |||
|association_with_transcript=-436bp_to_ENSMUST00000070709,NM_153793,uc008erm.2,uc008ern.2_5end | |||
|description=CAGE_peak_2_at_Rell2_5end | |||
|id=chr18:38114719..38114776,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.32e-13!23;CL:0000337!1.32e-13!23;CL:0000540!9.76e-12!33;CL:0000047!9.76e-12!33;CL:0000031!9.76e-12!33;CL:0000404!9.76e-12!33;CL:0000221!6.26e-09!44;CL:0000133!6.26e-09!44;CL:0002319!1.29e-08!43;CL:0000393!2.36e-08!39;CL:0000211!2.36e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.28e-19,23;CL:0000337,3.28e-19,23;CL:0000540,5.52e-12,33;CL:0000047,5.52e-12,33;CL:0000031,5.52e-12,33;CL:0000404,5.52e-12,33;CL:0000393,6.68e-09,39;CL:0000211,6.68e-09,39;CL:0000221,8.85e-08,44;CL:0000133,8.85e-08,44;CL:0002319,2.26e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.32e-23!73;UBERON:0005743!1.32e-23!73;UBERON:0000073!1.44e-23!75;UBERON:0001016!1.44e-23!75;UBERON:0002346!6.62e-22!71;UBERON:0003075!6.62e-22!71;UBERON:0007284!6.62e-22!71;UBERON:0001049!7.90e-22!52;UBERON:0005068!7.90e-22!52;UBERON:0006241!7.90e-22!52;UBERON:0007135!7.90e-22!52;UBERON:0000033!7.33e-21!63;UBERON:0000955!3.00e-20!50;UBERON:0006238!3.00e-20!50;UBERON:0004121!3.54e-20!102;UBERON:0000924!3.54e-20!102;UBERON:0006601!3.54e-20!102;UBERON:0002616!1.06e-19!49;UBERON:0003056!6.19e-18!49;UBERON:0002020!5.50e-17!34;UBERON:0003080!1.08e-16!40;UBERON:0007811!1.59e-16!86;UBERON:0002780!5.41e-16!39;UBERON:0001890!5.41e-16!39;UBERON:0006240!5.41e-16!39;UBERON:0000153!2.02e-14!94;UBERON:0002791!9.52e-14!29;UBERON:0003528!9.52e-14!29;UBERON:0001893!9.52e-14!29;UBERON:0000956!2.64e-09!21;UBERON:0001869!2.64e-09!21;UBERON:0000203!2.64e-09!21;UBERON:0002619!2.19e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.81e-32,54;UBERON:0002346,4.00e-31,64;UBERON:0003075,4.00e-31,64;UBERON:0007284,4.00e-31,64;UBERON:0001049,1.67e-30,52;UBERON:0005068,1.67e-30,52;UBERON:0006241,1.67e-30,52;UBERON:0007135,1.67e-30,52;UBERON:0001017,1.09e-27,73;UBERON:0001016,1.98e-26,75;UBERON:0010371,3.93e-26,73;UBERON:0000955,4.28e-25,47;UBERON:0006238,4.28e-25,47;UBERON:0002020,1.66e-24,34;UBERON:0002616,2.85e-24,46;UBERON:0004121,5.35e-24,95;UBERON:0000924,5.35e-24,95;UBERON:0006601,5.35e-24,95;UBERON:0003056,1.70e-23,49;UBERON:0003080,4.38e-22,40;UBERON:0002780,4.97e-21,39;UBERON:0001890,4.97e-21,39;UBERON:0006240,4.97e-21,39;UBERON:0003528,1.79e-19,29;UBERON:0002791,1.79e-19,29;UBERON:0001893,1.79e-19,29;UBERON:0010314,1.32e-17,92;UBERON:0000956,1.35e-12,21;UBERON:0001869,1.35e-12,21;UBERON:0000203,1.35e-12,21;UBERON:0002619,1.21e-09,17;UBERON:0002021,1.32e-09,10;UBERON:0000411,1.32e-09,10;UBERON:0001950,1.32e-09,10;UBERON:0003076,9.19e-09,12;UBERON:0003057,9.19e-09,12;UBERON:0002420,2.87e-08,8;UBERON:0007245,2.87e-08,8;UBERON:0010009,2.87e-08,8;UBERON:0010011,2.87e-08,8;UBERON:0000454,2.87e-08,8;UBERON:0002240,1.93e-07,6;UBERON:0005174,1.93e-07,6;UBERON:0001137,1.93e-07,6 | |||
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| |||
|short_description=p2@Rell2 | |||
}} |
Revision as of 16:07, 13 September 2013
Short description: | p2@Rell2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rell2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -436bp_to_ENSMUST00000070709, NM_153793, uc008erm.2, uc008ern.2_5end |
EntrezGene: | Rell2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.28e-19 | 23 |
neuroblast (sensu Vertebrata) | 3.28e-19 | 23 |
neuron | 5.52e-12 | 33 |
neuronal stem cell | 5.52e-12 | 33 |
neuroblast | 5.52e-12 | 33 |
electrically signaling cell | 5.52e-12 | 33 |
electrically responsive cell | 6.68e-09 | 39 |
electrically active cell | 6.68e-09 | 39 |
ectodermal cell | 8.85e-08 | 44 |
neurectodermal cell | 8.85e-08 | 44 |
neural cell | 2.26e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.