FFCP PHASE1:Mm9::chr12:32746059..32746073,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=19088|HGNC=|UniProt=P31324|association_with_transcript=26bp_to_ENSMUST00000003079_5end|description=CAGE_peak_2_at_Prkar2b_5end|id=chr12:32746059..32746073,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002369,4.94e-07,7;UBERON:0006858,4.94e-07,7|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,2.99798785634096,1.41732687172878,4.19737126876888,0.157731082679119,0.274228867211478,0.42438965179803,0.680346321208558,0,0.783599367416806,0,0,0,0,0,0,0,0,1.27006134691926,1.84519436275371,0,0,0,0,2.92972141515835,3.1253413780952,1.0470474879476,3.52938892818609,2.73218193983378,1.94204141212461,0.503587271902309,1.21652317463417,1.83546752161682,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,4.11615097657515,5.15760191889762,0,2.83243045203437,2.11596391708813,1.26766280701236,0,0.889294796111139,0,0,0.7104801149461,0.299600110518405,0,2.48855069540346,1.75507719831198,3.78584930432488,0.571301968807607,1.32521124570968,2.20483438586917,1.15014565221884,1.83843757322004,0,0.638436690425939,1.22885226604995,1.84640802822271,2.56165402086747,2.6045668527838,0,0.56276261003168,0.916789486660861,4.71405736757868,2.70506193518296,2.42319279572891,0.151452386666368,0.302286240427142,0,0,0,0,0,0,3.23022166303029,5.96506129023202,3.63700406444016,3.18005617059306,0.704217098883403,2.56652954828636,0,7.11066703153331,0,0.253359865475099,0,0.79928715803342,0,13.8051189330287,8.15381035800839,17.6589977421042,20.9860102503013,27.1300752994721,10.7005723493491,17.9703225601436,0.247194967734374,57.6951434110447,2.65383165584962,1.45590164952668,2.20841518460394,2.42437626567611,0,0.292780797011547,0.209446706813455,0,0.239630249011841,2.39961092397363,1.77898317902291,1.04853447583376,3.66000482254901,6.91098936620754,0.521472960576829,1.79000820131231,1.45451631191692,2.10913641988085,0.407357455401265,2.98576729464223,0.252722758433675,12.2056276414155,0.260240885925407,0,0.360124259610698,0.60281927134286,0.816437989815934,0.768682321709099,0.749613796477831,0.517406741478031,0.215567992932842,0.378212160335639,0.351902248327898,0,0.278047249225598,0.696504333044333,0,1.59227413454795,0.702213187313235,1.28673953557358,1.98914449576915,0.621377317606506,0.234526059981096,0.540186184383045,0,0.590292695242212,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,2.29834449710733,1.37816976227955,1.46199987425332,1.3173006917463,0.671032093801859,0.841159794256509,2.16099685996497,0,0,0.639864751605702,0.464473343720877,0.515469845288373,0,0.444756087689741,0.951128130562796,0.949058123089023,0,0.502670417600539,0.795825888164603,0.779856348476481,1.79763881730844,0.216138049874694,0.199141273254367,0.379335801906163,1.14248512609729,1.1270773567308,0.203651327845314,0,0.280543279561274,0.189709611372772,0.295220295959204,0.31399745568275,0.740382983530803,0,5.33904338291501,3.93117990226406,3.14806957338795,3.85434230638156,2.65294875727659,1.52775511068852,1.15078454980324,3.89124544260085,1.37280706594041,0,0,0,0,0,0,1.10851914099963,0.37898282354097,0.488894929326078,0.169745085775188,0,0.335012514883631,0.714130922658041,0.780534591431195,1.57635144106191,1.10732344824387,1.75400245523236,1.14704320301017,2.41758974612254,1.3018415272336,0,0.54390568381871,1.47529281905711,6.34654516500885,0.321101179975584,0.937693492737625,0.983609672260053,2.52470927204373,0,0.390438744296638,0.430846795465598,0.716906393857656,0.222798674082394,0.283076530788832,0,0,0,0.963963949265421,12.6326675835359,1.06839362200353,0.162886959353576,0.494910368917606,0,0,0,0.188605079755898,0.295301892880773,0,0.516856586336442,0.727067458955011,0,0.632073515871632,0,1.03135543248187,2.04263763452273,0.540183282093931,0.129358683782755,0.643011105094777,0.532020700926821,0.356737635204141,0.493647061806363,0.913394847343798,0.23467170806371,0.21183207086382,0.220528398054962,2.80306630000516,1.77610869365496,5.48847616846218,2.86493625607528,2.1338316966858,0.291480836629851,1.11255181206306,3.2465467351592,0.412773735926445,1.66675074632741,4.70921142511728,3.41735569302563,3.43167259809784,1.5298058699447,1.6794174278839,1.79659965945751,0,0.158167996790568,0.406638934253697,0.86404272657441,0.418176592028937,1.09181281873089,1.21377911746339,0.743881101528023,1.04702376793612,0.129614973291793,2.4853572523477,0,6.72824457197905,9.92750942742586,15.5560950675238,16.4032975816719,15.20605129417,3.87278887530988,4.03633593016245,3.35549902162275,0.241584120826006,1.44015003128933,1.89606672376907,0.202725215290164,0.308132871494482,0.51968329191118,0.179026695667481,0.79472541912506,0.600977247599844,0.443068581523732,0.908698049533329,1.06689529317,1.41156659191577,0.487289403698762,0.192423683280659,0.818138315270983,0,0,0,0,0.772758376128762,0.187682475451182,0.36630324853453,0.214368379079066,0.501572104035363,3.95326289831947,3.68260189205742,2.86447756719698,2.06223818812425,2.74033007908257,1.5107877947794,2.02506750069542,2.2516060161211,0,1.55328093525546,0.830298780673413,1.59609949360412,1.36586884603307,0.486213434136588,1.25767897576789,3.30918315210025,6.66740183404846,6.79915688888351,5.45562656306086,6.82282471762253,5.57654459758527,5.84741658296836,4.40115085108447,4.41773551593598,5.39893408182765,6.19181798667996,5.44656331940821,5.59436739344745,4.12085900803307,6.03515572551029,4.4573002810104,3.90446773550542,5.48403236878838,4.94177816549917,5.36423468367385,5.4153349050673,4.93905526756486,5.26139422875686,5.29636043998861,4.48913817326191,6.28765596058123,5.71325997778268,8.18462086339379,5.11291575913688,2.70069255373598,1.99848462350357,5.14649538579898,6.66100267549725,7.26895661861605,8.6030653456611,11.1296561097802|short_description=p2@Prkar2b}} | ||
|EntrezGene=19088 | |||
|HGNC= | |||
|UniProt=P31324 | |||
|association_with_transcript=26bp_to_ENSMUST00000003079_5end | |||
|description=CAGE_peak_2_at_Prkar2b_5end | |||
|id=chr12:32746059..32746073,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,4.94e-07,7;UBERON:0006858,4.94e-07,7 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,2.99798785634096,1.41732687172878,4.19737126876888,0.157731082679119,0.274228867211478,0.42438965179803,0.680346321208558,0,0.783599367416806,0,0,0,0,0,0,0,0,1.27006134691926,1.84519436275371,0,0,0,0,2.92972141515835,3.1253413780952,1.0470474879476,3.52938892818609,2.73218193983378,1.94204141212461,0.503587271902309,1.21652317463417,1.83546752161682,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,4.11615097657515,5.15760191889762,0,2.83243045203437,2.11596391708813,1.26766280701236,0,0.889294796111139,0,0,0.7104801149461,0.299600110518405,0,2.48855069540346,1.75507719831198,3.78584930432488,0.571301968807607,1.32521124570968,2.20483438586917,1.15014565221884,1.83843757322004,0,0.638436690425939,1.22885226604995,1.84640802822271,2.56165402086747,2.6045668527838,0,0.56276261003168,0.916789486660861,4.71405736757868,2.70506193518296,2.42319279572891,0.151452386666368,0.302286240427142,0,0,0,0,0,0,3.23022166303029,5.96506129023202,3.63700406444016,3.18005617059306,0.704217098883403,2.56652954828636,0,7.11066703153331,0,0.253359865475099,0,0.79928715803342,0,13.8051189330287,8.15381035800839,17.6589977421042,20.9860102503013,27.1300752994721,10.7005723493491,17.9703225601436,0.247194967734374,57.6951434110447,2.65383165584962,1.45590164952668,2.20841518460394,2.42437626567611,0,0.292780797011547,0.209446706813455,0,0.239630249011841,2.39961092397363,1.77898317902291,1.04853447583376,3.66000482254901,6.91098936620754,0.521472960576829,1.79000820131231,1.45451631191692,2.10913641988085,0.407357455401265,2.98576729464223,0.252722758433675,12.2056276414155,0.260240885925407,0,0.360124259610698,0.60281927134286,0.816437989815934,0.768682321709099,0.749613796477831,0.517406741478031,0.215567992932842,0.378212160335639,0.351902248327898,0,0.278047249225598,0.696504333044333,0,1.59227413454795,0.702213187313235,1.28673953557358,1.98914449576915,0.621377317606506,0.234526059981096,0.540186184383045,0,0.590292695242212,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,2.29834449710733,1.37816976227955,1.46199987425332,1.3173006917463,0.671032093801859,0.841159794256509,2.16099685996497,0,0,0.639864751605702,0.464473343720877,0.515469845288373,0,0.444756087689741,0.951128130562796,0.949058123089023,0,0.502670417600539,0.795825888164603,0.779856348476481,1.79763881730844,0.216138049874694,0.199141273254367,0.379335801906163,1.14248512609729,1.1270773567308,0.203651327845314,0,0.280543279561274,0.189709611372772,0.295220295959204,0.31399745568275,0.740382983530803,0,5.33904338291501,3.93117990226406,3.14806957338795,3.85434230638156,2.65294875727659,1.52775511068852,1.15078454980324,3.89124544260085,1.37280706594041,0,0,0,0,0,0,1.10851914099963,0.37898282354097,0.488894929326078,0.169745085775188,0,0.335012514883631,0.714130922658041,0.780534591431195,1.57635144106191,1.10732344824387,1.75400245523236,1.14704320301017,2.41758974612254,1.3018415272336,0,0.54390568381871,1.47529281905711,6.34654516500885,0.321101179975584,0.937693492737625,0.983609672260053,2.52470927204373,0,0.390438744296638,0.430846795465598,0.716906393857656,0.222798674082394,0.283076530788832,0,0,0,0.963963949265421,12.6326675835359,1.06839362200353,0.162886959353576,0.494910368917606,0,0,0,0.188605079755898,0.295301892880773,0,0.516856586336442,0.727067458955011,0,0.632073515871632,0,1.03135543248187,2.04263763452273,0.540183282093931,0.129358683782755,0.643011105094777,0.532020700926821,0.356737635204141,0.493647061806363,0.913394847343798,0.23467170806371,0.21183207086382,0.220528398054962,2.80306630000516,1.77610869365496,5.48847616846218,2.86493625607528,2.1338316966858,0.291480836629851,1.11255181206306,3.2465467351592,0.412773735926445,1.66675074632741,4.70921142511728,3.41735569302563,3.43167259809784,1.5298058699447,1.6794174278839,1.79659965945751,0,0.158167996790568,0.406638934253697,0.86404272657441,0.418176592028937,1.09181281873089,1.21377911746339,0.743881101528023,1.04702376793612,0.129614973291793,2.4853572523477,0,6.72824457197905,9.92750942742586,15.5560950675238,16.4032975816719,15.20605129417,3.87278887530988,4.03633593016245,3.35549902162275,0.241584120826006,1.44015003128933,1.89606672376907,0.202725215290164,0.308132871494482,0.51968329191118,0.179026695667481,0.79472541912506,0.600977247599844,0.443068581523732,0.908698049533329,1.06689529317,1.41156659191577,0.487289403698762,0.192423683280659,0.818138315270983,0,0,0,0,0.772758376128762,0.187682475451182,0.36630324853453,0.214368379079066,0.501572104035363,3.95326289831947,3.68260189205742,2.86447756719698,2.06223818812425,2.74033007908257,1.5107877947794,2.02506750069542,2.2516060161211,0,1.55328093525546,0.830298780673413,1.59609949360412,1.36586884603307,0.486213434136588,1.25767897576789,3.30918315210025,6.66740183404846,6.79915688888351,5.45562656306086,6.82282471762253,5.57654459758527,5.84741658296836,4.40115085108447,4.41773551593598,5.39893408182765,6.19181798667996,5.44656331940821,5.59436739344745,4.12085900803307,6.03515572551029,4.4573002810104,3.90446773550542,5.48403236878838,4.94177816549917,5.36423468367385,5.4153349050673,4.93905526756486,5.26139422875686,5.29636043998861,4.48913817326191,6.28765596058123,5.71325997778268,8.18462086339379,5.11291575913688,2.70069255373598,1.99848462350357,5.14649538579898,6.66100267549725,7.26895661861605,8.6030653456611,11.1296561097802 | |||
|short_description=p2@Prkar2b | |||
}} | |||
Revision as of 22:43, 12 September 2013
| Short description: | p2@Prkar2b |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Prkar2b_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 26bp_to_ENSMUST00000003079_5end |
| EntrezGene: | Prkar2b |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adrenal gland | 4.94e-07 | 7 |
| adrenal/interrenal gland | 4.94e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
