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MCL coexpression mm9:37: Difference between revisions

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|ontology_enrichment_uberon=UBERON:0001911!1.87e-86!2;UBERON:0000076!1.87e-86!2;UBERON:0005333!1.87e-86!2;UBERON:0008425!1.87e-86!2;UBERON:0005311!1.87e-86!2;UBERON:0003100!5.67e-17!11;UBERON:0005085!1.42e-14!13;UBERON:0005153!1.86e-11!17;UBERON:0005157!6.23e-10!20;UBERON:0002365!3.41e-08!25;UBERON:0002330!3.41e-08!25
|ontology_enrichment_uberon=UBERON:0001911!1.87e-86!2;UBERON:0000076!1.87e-86!2;UBERON:0005333!1.87e-86!2;UBERON:0008425!1.87e-86!2;UBERON:0005311!1.87e-86!2;UBERON:0003100!5.67e-17!11;UBERON:0005085!1.42e-14!13;UBERON:0005153!1.86e-11!17;UBERON:0005157!6.23e-10!20;UBERON:0002365!3.41e-08!25;UBERON:0002330!3.41e-08!25
|tfbs_overrepresentation_for_novel_motifs=9.93346e-05,1.56154e-08,0.000993466,0.531296,1.68636,2.43687,0.000121995,0.0632741,0.00255517,2.68683e-07,4.69881e-06,2.56068,2.14308e-05,0.00183568,1.44195,0,0.00166624,0.0630434,0.00251614,0.000560959,1.3099,0.0961809,0.00986949,3.08406,0.000107836,0.146291,0.0251234,0.00954783,9.91609e-06,0.000907202,0.0013746,0.123499,0.00128941,0.006925,0.00892969,0.00390749,3.34741e-11,1.51904e-05,0.191478,0.0299265,1.18606,0.00364315,0.0419517,1.33834,3.07762e-07,1.41568e-05,0.000271162,0.00364365,0.0913877,0.0132239,0.106007,0.000936188,0.0292961,0.219597,0.130671,0.000789148,0.230285,0.0291975,0.000356842,5.16782e-05,0.177198,0.00885794,0.361118,0.000914429,1.49102e-05,0.147373,0.796649,3.60365,1.49722,0.0485953,8.67258e-06,0.628923,0,1.00457,7.02008e-11,9.77959e-05,0.494154,0.0187621,0.365323,0.362596,3.12606,0.15632,3.44907,0.519488,0.0248314,0,1.60193e-06,0.00444237,0.000307571,1.01223,0.0907754,0.0262543,1.48133,1.11135,3.11088e-07,0.900983,0.444701,0.0115419,0.529277,0.0464815,2.16629,0.479908,0.0406798,0.676018,0.373126,9.04744e-07,0.00362874,0.252322,4.31646e-05,0.000179165,0.0767357,0.511998,0.0178273,0.0114629,1.90768,2.1958,3.5198e-15,0.0131554,0.0386478,1.46072,1.02835,0.276582,1.5647,1.15596,0.0315858,0.376043,0.575178,0.0296176,0.152163,0.0828359,2.62429,0.000465429,0.451964,1.47077,2.02995,2.60131,4.23159,0.18633,0.649699,1.93037,0.160978,0.812182,0.341477,0.929958,0.0974572,0.244792,0.0841369,0.400102,0.0561075,1.0301e-06,1.06211e-05,0,0.222001,9.67237e-06,0.355444,0.0325109,1.62111,0.00574578,0.00508367,4.3258e-06,0.0847746,0.132974,0.0880458,0.000169871,0.798672,0.679021,0.0934383,0.84379,8.00392e-15
|tfbs_overrepresentation_for_novel_motifs=9.93346e-05,1.56154e-08,0.000993466,0.531296,1.68636,2.43687,0.000121995,0.0632741,0.00255517,2.68683e-07,4.69881e-06,2.56068,2.14308e-05,0.00183568,1.44195,0,0.00166624,0.0630434,0.00251614,0.000560959,1.3099,0.0961809,0.00986949,3.08406,0.000107836,0.146291,0.0251234,0.00954783,9.91609e-06,0.000907202,0.0013746,0.123499,0.00128941,0.006925,0.00892969,0.00390749,3.34741e-11,1.51904e-05,0.191478,0.0299265,1.18606,0.00364315,0.0419517,1.33834,3.07762e-07,1.41568e-05,0.000271162,0.00364365,0.0913877,0.0132239,0.106007,0.000936188,0.0292961,0.219597,0.130671,0.000789148,0.230285,0.0291975,0.000356842,5.16782e-05,0.177198,0.00885794,0.361118,0.000914429,1.49102e-05,0.147373,0.796649,3.60365,1.49722,0.0485953,8.67258e-06,0.628923,0,1.00457,7.02008e-11,9.77959e-05,0.494154,0.0187621,0.365323,0.362596,3.12606,0.15632,3.44907,0.519488,0.0248314,0,1.60193e-06,0.00444237,0.000307571,1.01223,0.0907754,0.0262543,1.48133,1.11135,3.11088e-07,0.900983,0.444701,0.0115419,0.529277,0.0464815,2.16629,0.479908,0.0406798,0.676018,0.373126,9.04744e-07,0.00362874,0.252322,4.31646e-05,0.000179165,0.0767357,0.511998,0.0178273,0.0114629,1.90768,2.1958,3.5198e-15,0.0131554,0.0386478,1.46072,1.02835,0.276582,1.5647,1.15596,0.0315858,0.376043,0.575178,0.0296176,0.152163,0.0828359,2.62429,0.000465429,0.451964,1.47077,2.02995,2.60131,4.23159,0.18633,0.649699,1.93037,0.160978,0.812182,0.341477,0.929958,0.0974572,0.244792,0.0841369,0.400102,0.0561075,1.0301e-06,1.06211e-05,0,0.222001,9.67237e-06,0.355444,0.0325109,1.62111,0.00574578,0.00508367,4.3258e-06,0.0847746,0.132974,0.0880458,0.000169871,0.798672,0.679021,0.0934383,0.84379,8.00392e-15
|tfbs_overrepresentation_jaspar=MA0003.1;0,MA0004.1;6.38038e-06,MA0006.1;1.95901e-08,MA0007.1;0.056473,MA0009.1;1.28326,MA0014.1;0,MA0017.1;0.148835,MA0019.1;1.0219,MA0024.1;0.00718103,MA0025.1;0.97638,MA0027.1;0.865907,MA0028.1;1.20901e-08,MA0029.1;0.509259,MA0030.1;0.0885816,MA0031.1;0.2825,MA0038.1;0.501014,MA0040.1;3.18103,MA0041.1;0.889159,MA0042.1;0.109533,MA0043.1;0.192485,MA0046.1;0.342492,MA0048.1;4.85773e-10,MA0050.1;0.0106081,MA0051.1;0.00474648,MA0052.1;3.72077,MA0055.1;4.23939e-09,MA0056.1;0,MA0057.1;2.05746e-07,MA0058.1;5.28787e-06,MA0059.1;0.00727805,MA0060.1;1.40092e-06,MA0061.1;0.000102306,MA0063.1;0,MA0066.1;0.341701,MA0067.1;0.0214997,MA0068.1;6.65427e-10,MA0069.1;0.102657,MA0070.1;2.00072,MA0071.1;0.07938,MA0072.1;0.408863,MA0073.1;0,MA0074.1;0.48761,MA0076.1;8.14804e-06,MA0077.1;0.506199,MA0078.1;2.03626,MA0081.1;1.73157,MA0083.1;0.501523,MA0084.1;1.84491,MA0087.1;2.36667,MA0088.1;1.2566e-08,MA0089.1;0,MA0090.1;0.96305,MA0091.1;2.18883,MA0092.1;0.405244,MA0093.1;1.00096e-07,MA0095.1;0,MA0098.1;0,MA0100.1;0.000721341,MA0101.1;0.0166984,MA0103.1;0.809734,MA0105.1;4.66681e-12,MA0106.1;0.0802009,MA0107.1;0.0170214,MA0108.2;0.775566,MA0109.1;0,MA0111.1;0.0199411,MA0113.1;1.78938,MA0114.1;0.340358,MA0115.1;0.100372,MA0116.1;0.000774513,MA0117.1;0.0297623,MA0119.1;0.0170236,MA0122.1;0.179158,MA0124.1;2.05079,MA0125.1;1.60667,MA0130.1;0,MA0131.1;0.00187255,MA0132.1;0,MA0133.1;0,MA0135.1;9.74241,MA0136.1;0.28129,MA0139.1;2.81118e-05,MA0140.1;0.0332465,MA0141.1;0.110849,MA0142.1;1.59651,MA0143.1;1.98597,MA0144.1;5.29527,MA0145.1;1.11139e-05,MA0146.1;4.64806e-14,MA0147.1;7.9196e-07,MA0148.1;0.654889,MA0149.1;7.26241e-05,MA0062.2;9.14954e-13,MA0035.2;0.195156,MA0039.2;0,MA0138.2;0.0548809,MA0002.2;0.0772462,MA0137.2;3.20714,MA0104.2;1.14128e-07,MA0047.2;0.775186,MA0112.2;1.09408e-08,MA0065.2;6.99265e-06,MA0150.1;0.21265,MA0151.1;0,MA0152.1;0.497624,MA0153.1;0.934034,MA0154.1;0.000705805,MA0155.1;9.54874e-06,MA0156.1;0.141129,MA0157.1;1.33121,MA0158.1;0,MA0159.1;0.321217,MA0160.1;0.365095,MA0161.1;0,MA0162.1;0,MA0163.1;0,MA0164.1;0.206491,MA0080.2;0.327221,MA0018.2;0.000872479,MA0099.2;0.0499566,MA0079.2;0,MA0102.2;0.14843,MA0258.1;0.00210655,MA0259.1;3.01038e-08,MA0442.1;0
}}
}}

Revision as of 11:03, 23 January 2013


Phase1 CAGE Peaks

 Short description
Mm9::chr10:100283528..100283529,+p@chr10:100283528..100283529
+
Mm9::chr10:46245998..46245999,+p@chr10:46245998..46245999
+
Mm9::chr10:5740665..5740710,-p@chr10:5740665..5740710
-
Mm9::chr10:69144379..69144384,+p@chr10:69144379..69144384
+
Mm9::chr10:81564930..81564939,+p@chr10:81564930..81564939
+
Mm9::chr10:88807820..88807841,-p1@ENSMUST00000168681
p1@uc011xlk.1
Mm9::chr11:100614219..100614221,-p@chr11:100614219..100614221
-
Mm9::chr11:100720806..100720820,+p6@Stat5a
Mm9::chr11:109582953..109582969,-p@chr11:109582953..109582969
-
Mm9::chr11:109583018..109583030,-p@chr11:109583018..109583030
-
Mm9::chr11:109583037..109583112,-p4@Fam20a
Mm9::chr11:109616343..109616364,+p@chr11:109616343..109616364
+
Mm9::chr11:109658667..109658675,-p@chr11:109658667..109658675
-
Mm9::chr11:109658690..109658694,-p@chr11:109658690..109658694
-
Mm9::chr11:109658712..109658715,-p@chr11:109658712..109658715
-
Mm9::chr11:118304829..118304851,+p13@C1qtnf1
Mm9::chr11:121057666..121057669,-p@chr11:121057666..121057669
-
Mm9::chr11:20364661..20364673,-p@chr11:20364661..20364673
-
Mm9::chr11:29447361..29447364,-p@chr11:29447361..29447364
-
Mm9::chr11:35582964..35582977,+p3@Pank3
Mm9::chr11:6535539..6535544,-p@chr11:6535539..6535544
-
Mm9::chr11:6535548..6535558,-p@chr11:6535548..6535558
-
Mm9::chr11:6535604..6535612,+p@chr11:6535604..6535612
+
Mm9::chr11:6536708..6536724,+p@chr11:6536708..6536724
+
Mm9::chr11:6537234..6537253,+p@chr11:6537234..6537253
+
Mm9::chr11:6537248..6537263,-p3@Wap
Mm9::chr11:6537276..6537305,-p2@Wap
Mm9::chr11:6538643..6538658,-p1@Wap
Mm9::chr11:6538794..6538800,-p4@Wap
Mm9::chr11:69498053..69498064,+p2@ENSMUST00000145435
Mm9::chr11:83522595..83522598,+p2@Expi
Mm9::chr11:83522603..83522618,+p1@Expi
Mm9::chr11:83993294..83993351,+p1@Acaca
p1@LOC100503180
p1@LOC100503206
Mm9::chr11:83993354..83993365,+p10@Acaca
p6@LOC100503180
p6@LOC100503206
Mm9::chr11:83993368..83993379,+p5@LOC100503180
p5@LOC100503206
p9@Acaca
Mm9::chr11:83993811..83993862,+p@chr11:83993811..83993862
+
Mm9::chr11:87641811..87641826,-p2@Lpo
Mm9::chr11:87641837..87641850,-p4@Lpo
Mm9::chr11:95699107..95699109,+p@chr11:95699107..95699109
+
Mm9::chr12:45501817..45501821,+p@chr12:45501817..45501821
+
Mm9::chr12:52131128..52131133,-p@chr12:52131128..52131133
-
Mm9::chr12:52131163..52131171,-p@chr12:52131163..52131171
-
Mm9::chr12:8768872..8768876,-p@chr12:8768872..8768876
-
Mm9::chr13:103837241..103837242,-p@chr13:103837241..103837242
-
Mm9::chr13:104709705..104709732,+p@chr13:104709705..104709732
+
Mm9::chr13:111655159..111655168,+p@chr13:111655159..111655168
+
Mm9::chr13:23550306..23550308,-p@chr13:23550306..23550308
-
Mm9::chr13:23554662..23554664,-p@chr13:23554662..23554664
-
Mm9::chr13:23557637..23557642,-p@chr13:23557637..23557642
-
Mm9::chr13:23557708..23557728,-p2@Btn1a1
Mm9::chr13:23557741..23557748,-p3@Btn1a1
Mm9::chr13:23557764..23557783,-p1@Btn1a1
Mm9::chr13:57556521..57556525,-p@chr13:57556521..57556525
-
Mm9::chr13:58656432..58656452,-p@chr13:58656432..58656452
-
Mm9::chr13:58712240..58712266,-p1@Slc28a3
Mm9::chr13:70089221..70089222,-p@chr13:70089221..70089222
-
Mm9::chr13:72766011..72766034,-p1@Gm20554
Mm9::chr13:72766234..72766243,+p3@Irx2
Mm9::chr13:72766250..72766273,+p1@Irx2
Mm9::chr13:90032838..90032840,-p@chr13:90032838..90032840
-
Mm9::chr14:30342837..30342838,-p@chr14:30342837..30342838
-
Mm9::chr14:32248407..32248435,+p@chr14:32248407..32248435
+
Mm9::chr14:9989484..9989486,+p@chr14:9989484..9989486
+
Mm9::chr15:103393227..103393240,-p@chr15:103393227..103393240
-
Mm9::chr15:103393258..103393296,+p@chr15:103393258..103393296
+
Mm9::chr15:103393352..103393360,-p@chr15:103393352..103393360
-
Mm9::chr15:103393361..103393372,-p@chr15:103393361..103393372
-
Mm9::chr15:103393382..103393391,-p@chr15:103393382..103393391
-
Mm9::chr15:103393393..103393402,+p@chr15:103393393..103393402
+
Mm9::chr15:103393425..103393435,-p@chr15:103393425..103393435
-
Mm9::chr15:103393703..103393706,-p@chr15:103393703..103393706
-
Mm9::chr15:103393712..103393723,-p@chr15:103393712..103393723
-
Mm9::chr15:103393725..103393729,-p@chr15:103393725..103393729
-
Mm9::chr15:103393764..103393775,-p@chr15:103393764..103393775
-
Mm9::chr15:103393812..103393824,-p@chr15:103393812..103393824
-
Mm9::chr15:103393830..103393851,+p@chr15:103393830..103393851
+
Mm9::chr15:103393839..103393860,-p@chr15:103393839..103393860
-
Mm9::chr15:103393862..103393894,-p@chr15:103393862..103393894
-
Mm9::chr15:103394653..103394683,-p@chr15:103394653..103394683
-
Mm9::chr15:103395500..103395519,-p1@Glycam1
Mm9::chr15:15105208..15105219,-p@chr15:15105208..15105219
-
Mm9::chr15:24986864..24986868,-p@chr15:24986864..24986868
-
Mm9::chr15:58788059..58788070,-p@chr15:58788059..58788070
-
Mm9::chr15:74707088..74707089,-p@chr15:74707088..74707089
-
Mm9::chr15:79723482..79723493,-p2@D730005E14Rik
Mm9::chr15:79730701..79730718,+p@chr15:79730701..79730718
+
Mm9::chr15:85620623..85620633,-p@chr15:85620623..85620633
-
Mm9::chr15:90146874..90146878,-p@chr15:90146874..90146878
-
Mm9::chr15:98311094..98311111,-p@chr15:98311094..98311111
-
Mm9::chr15:98311956..98311963,+p@chr15:98311956..98311963
+
Mm9::chr15:98312398..98312401,-p@chr15:98312398..98312401
-
Mm9::chr15:98312614..98312624,-p@chr15:98312614..98312624
-
Mm9::chr15:98312638..98312662,-p@chr15:98312638..98312662
-
Mm9::chr15:98313117..98313136,-p1@Lalba
Mm9::chr15:98313162..98313173,-p2@Lalba
Mm9::chr15:98322828..98322833,+p@chr15:98322828..98322833
+
Mm9::chr15:98557870..98557874,-p@chr15:98557870..98557874
-
Mm9::chr15:99366344..99366348,-p@chr15:99366344..99366348
-
Mm9::chr16:17927922..17927964,-p2@Slc25a1
Mm9::chr16:23269383..23269401,+p9@St6gal1
Mm9::chr16:45163355..45163401,+p@chr16:45163355..45163401
+
Mm9::chr16:61389759..61389762,-p@chr16:61389759..61389762
-
Mm9::chr16:62814513..62814529,+p1@Stx19
Mm9::chr16:93598605..93598606,-p@chr16:93598605..93598606
-
Mm9::chr17:12054056..12054058,-p@chr17:12054056..12054058
-
Mm9::chr17:24607117..24607131,+p4@Pgp
Mm9::chr17:30084999..30085000,+p@chr17:30084999..30085000
+
Mm9::chr17:33966176..33966187,+p4@Ndufa7
Mm9::chr18:15483458..15483466,+p@chr18:15483458..15483466
+
Mm9::chr18:27904115..27904120,+p@chr18:27904115..27904120
+
Mm9::chr18:53658339..53658343,-p@chr18:53658339..53658343
-
Mm9::chr18:6595472..6595477,-p@chr18:6595472..6595477
-
Mm9::chr18:6733731..6733747,+p@chr18:6733731..6733747
+
Mm9::chr18:6733777..6733786,+p@chr18:6733777..6733786
+
Mm9::chr18:6733891..6733896,+p@chr18:6733891..6733896
+
Mm9::chr18:6733951..6733958,+p@chr18:6733951..6733958
+
Mm9::chr18:6765033..6765048,+p3@Rab18
Mm9::chr18:6765084..6765096,+p4@Rab18
Mm9::chr18:79024191..79024193,+p@chr18:79024191..79024193
+
Mm9::chr18:81785997..81786001,-p@chr18:81785997..81786001
-
Mm9::chr19:17975686..17975688,-p@chr19:17975686..17975688
-
Mm9::chr19:4104421..4104423,+p@chr19:4104421..4104423
+
Mm9::chr19:5822347..5822351,+p@chr19:5822347..5822351
+
Mm9::chr1:139648169..139648196,-p@chr1:139648169..139648196
-
Mm9::chr1:193093195..193093197,-p@chr1:193093195..193093197
-
Mm9::chr1:195099293..195099311,-p1@G0s2
Mm9::chr1:23404398..23404401,-p1@uc007amc.1
Mm9::chr1:37943205..37943209,+p@chr1:37943205..37943209
+
Mm9::chr1:40637138..40637147,+p10@Slc9a4
Mm9::chr1:40637157..40637179,+p3@Slc9a4
Mm9::chr1:40637185..40637194,+p6@Slc9a4
Mm9::chr1:40637208..40637219,+p5@Slc9a4
Mm9::chr2:101613203..101613206,-p@chr2:101613203..101613206
-
Mm9::chr2:103264213..103264233,+p1@Elf5
Mm9::chr2:103264245..103264268,+p2@Elf5
Mm9::chr2:103264277..103264292,+p3@Elf5
Mm9::chr2:103279547..103279550,+p@chr2:103279547..103279550
+
Mm9::chr2:110561744..110561776,+p1@Muc15
Mm9::chr2:110561789..110561803,+p3@Muc15
Mm9::chr2:110571749..110571758,+p@chr2:110571749..110571758
+
Mm9::chr2:12222677..12222722,-p@chr2:12222677..12222722
-
Mm9::chr2:134688699..134688701,+p@chr2:134688699..134688701
+
Mm9::chr2:140424221..140424232,+p@chr2:140424221..140424232
+
Mm9::chr2:151795763..151795765,+p@chr2:151795763..151795765
+
Mm9::chr2:164568599..164568608,-p8@Wfdc3
Mm9::chr2:164568613..164568624,-p7@Wfdc3
Mm9::chr2:164568632..164568647,-p4@Wfdc3
Mm9::chr2:164568655..164568681,-p2@Wfdc3
Mm9::chr2:164568682..164568711,-p3@Wfdc3
Mm9::chr2:165677702..165677719,-p28@Zmynd8
Mm9::chr2:28416848..28416860,-p@chr2:28416848..28416860
-
Mm9::chr2:28418029..28418047,+p@chr2:28418029..28418047
+
Mm9::chr2:3283871..3283885,-p2@Olah
Mm9::chr2:58047912..58047963,-p2@Cytip
Mm9::chr2:99574978..99574987,+p@chr2:99574978..99574987
+
Mm9::chr3:103607044..103607052,+p1@Gm15471
Mm9::chr3:135489039..135489050,+p8@Slc39a8
Mm9::chr3:155015789..155015791,-p@chr3:155015789..155015791
-
Mm9::chr3:18943570..18943584,-p@chr3:18943570..18943584
-
Mm9::chr3:25229830..25229833,+p@chr3:25229830..25229833
+
Mm9::chr3:79647358..79647364,-p@chr3:79647358..79647364
-
Mm9::chr3:89041759..89041767,-p@chr3:89041759..89041767
-
Mm9::chr3:89043365..89043401,-p7@Trim46
Mm9::chr3:89074403..89074410,-p2@Slc50a1
Mm9::chr3:94221876..94221878,-p@chr3:94221876..94221878
-
Mm9::chr4:115520060..115520062,-p@chr4:115520060..115520062
-
Mm9::chr4:116740698..116740723,+p@chr4:116740698..116740723
+
Mm9::chr4:118627429..118627443,-p1@ENSMUST00000155069
p1@uc008ulc.1
Mm9::chr4:118627452..118627463,-p2@ENSMUST00000155069
p2@uc008ulc.1
Mm9::chr4:118634330..118634340,+p4@Lao1
Mm9::chr4:118634471..118634476,+p9@Lao1
Mm9::chr4:118634547..118634566,+p2@Lao1
Mm9::chr4:118634589..118634606,+p1@Lao1
Mm9::chr4:118636395..118636401,+p@chr4:118636395..118636401
+
Mm9::chr4:118636782..118636786,+p@chr4:118636782..118636786
+
Mm9::chr4:118636797..118636805,+p@chr4:118636797..118636805
+
Mm9::chr4:118636813..118636824,+p@chr4:118636813..118636824
+
Mm9::chr4:118636825..118636828,+p@chr4:118636825..118636828
+
Mm9::chr4:118637931..118637942,+p7@Lao1
Mm9::chr4:118640438..118640443,+p@chr4:118640438..118640443
+
Mm9::chr4:118640598..118640603,-p@chr4:118640598..118640603
-
Mm9::chr4:118640697..118640705,+p@chr4:118640697..118640705
+
Mm9::chr4:118640761..118640774,+p@chr4:118640761..118640774
+
Mm9::chr4:118641223..118641237,-p@chr4:118641223..118641237
-
Mm9::chr4:19765092..19765098,-p@chr4:19765092..19765098
-
Mm9::chr4:19935119..19935153,+p4@Ttpa
Mm9::chr4:40752273..40752277,-p@chr4:40752273..40752277
-
Mm9::chr4:40770608..40770628,-p@chr4:40770608..40770628
-
Mm9::chr4:40800811..40800835,-p@chr4:40800811..40800835
-
Mm9::chr4:40836029..40836032,+p@chr4:40836029..40836032
+
Mm9::chr4:43404975..43404982,+p@chr4:43404975..43404982
+
Mm9::chr4:62394478..62394481,-p@chr4:62394478..62394481
-
Mm9::chr5:104864131..104864147,+p1@Spp1
Mm9::chr5:118936959..118937003,+p@chr5:118936959..118937003
+
Mm9::chr5:151567394..151567401,+p9@Pds5b
Mm9::chr5:151567427..151567434,+p10@Pds5b
Mm9::chr5:17341790..17341804,-p10@Cd36
Mm9::chr5:24319811..24319816,-p12@Rheb
Mm9::chr5:38893329..38893340,-p8@Slc2a9
Mm9::chr5:38893346..38893365,-p5@Slc2a9
Mm9::chr5:53394250..53394255,+p@chr5:53394250..53394255
+
Mm9::chr5:53448964..53448972,+p4@Slc34a2
Mm9::chr5:73491357..73491360,-p@chr5:73491357..73491360
-
Mm9::chr5:88095225..88095243,+p1@Csn1s1
Mm9::chr5:88095990..88096001,+p@chr5:88095990..88096001
+
Mm9::chr5:88096251..88096262,+p@chr5:88096251..88096262
+
Mm9::chr5:88096268..88096283,+p@chr5:88096268..88096283
+
Mm9::chr5:88097350..88097355,+p@chr5:88097350..88097355
+
Mm9::chr5:88097629..88097633,+p@chr5:88097629..88097633
+
Mm9::chr5:88098006..88098035,+p@chr5:88098006..88098035
+
Mm9::chr5:88098535..88098555,+p@chr5:88098535..88098555
+
Mm9::chr5:88098560..88098587,-p@chr5:88098560..88098587
-
Mm9::chr5:88099935..88099953,-p@chr5:88099935..88099953
-
Mm9::chr5:88100023..88100041,+p@chr5:88100023..88100041
+
Mm9::chr5:88100053..88100078,-p@chr5:88100053..88100078
-
Mm9::chr5:88100568..88100584,-p@chr5:88100568..88100584
-
Mm9::chr5:88102247..88102287,+p@chr5:88102247..88102287
+
Mm9::chr5:88103072..88103090,+p@chr5:88103072..88103090
+
Mm9::chr5:88103101..88103120,-p@chr5:88103101..88103120
-
Mm9::chr5:88103215..88103245,+p@chr5:88103215..88103245
+
Mm9::chr5:88103244..88103281,-p@chr5:88103244..88103281
-
Mm9::chr5:88104026..88104055,+p@chr5:88104026..88104055
+
Mm9::chr5:88104060..88104087,-p@chr5:88104060..88104087
-
Mm9::chr5:88106054..88106056,+p@chr5:88106054..88106056
+
Mm9::chr5:88106613..88106646,+p@chr5:88106613..88106646
+
Mm9::chr5:88106878..88106881,+p@chr5:88106878..88106881
+
Mm9::chr5:88107041..88107085,+p@chr5:88107041..88107085
+
Mm9::chr5:88107092..88107108,-p@chr5:88107092..88107108
-
Mm9::chr5:88108071..88108075,-p@chr5:88108071..88108075
-
Mm9::chr5:88109040..88109079,+p@chr5:88109040..88109079
+
Mm9::chr5:88109833..88109851,+p@chr5:88109833..88109851
+
Mm9::chr5:88109869..88109894,+p@chr5:88109869..88109894
+
Mm9::chr5:88109913..88109924,-p@chr5:88109913..88109924
-
Mm9::chr5:88109964..88109969,-p@chr5:88109964..88109969
-
Mm9::chr5:88111209..88111249,+p@chr5:88111209..88111249
+
Mm9::chr5:88111566..88111575,+p@chr5:88111566..88111575
+
Mm9::chr5:88121676..88121704,-p@chr5:88121676..88121704
-
Mm9::chr5:88121815..88121823,-p@chr5:88121815..88121823
-
Mm9::chr5:88123526..88123536,+p@chr5:88123526..88123536
+
Mm9::chr5:88123539..88123551,+p@chr5:88123539..88123551
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Mm9::chr5:88123555..88123565,-p@chr5:88123555..88123565
-
Mm9::chr5:88123567..88123572,+p@chr5:88123567..88123572
+
Mm9::chr5:88123593..88123599,-p@chr5:88123593..88123599
-
Mm9::chr5:88123602..88123609,-p@chr5:88123602..88123609
-
Mm9::chr5:88123611..88123628,-p@chr5:88123611..88123628
-
Mm9::chr5:88123612..88123619,+p@chr5:88123612..88123619
+
Mm9::chr5:88123649..88123664,-p@chr5:88123649..88123664
-
Mm9::chr5:88123674..88123680,-p@chr5:88123674..88123680
-
Mm9::chr5:88123681..88123725,+p@chr5:88123681..88123725
+
Mm9::chr5:88123692..88123697,-p@chr5:88123692..88123697
-
Mm9::chr5:88123698..88123707,-p@chr5:88123698..88123707
-
Mm9::chr5:88123708..88123719,-p@chr5:88123708..88123719
-
Mm9::chr5:88123723..88123745,-p@chr5:88123723..88123745
-
Mm9::chr5:88123730..88123744,+p@chr5:88123730..88123744
+
Mm9::chr5:88123745..88123777,+p@chr5:88123745..88123777
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Mm9::chr5:88123764..88123855,-p@chr5:88123764..88123855
-
Mm9::chr5:88123793..88123819,+p@chr5:88123793..88123819
+
Mm9::chr5:88123821..88123845,+p@chr5:88123821..88123845
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Mm9::chr5:88123856..88123949,-p@chr5:88123856..88123949
-
Mm9::chr5:88123868..88123890,+p@chr5:88123868..88123890
+
Mm9::chr5:88123891..88123910,+p@chr5:88123891..88123910
+
Mm9::chr5:88123950..88123997,-p@chr5:88123950..88123997
-
Mm9::chr5:88123986..88123989,+p@chr5:88123986..88123989
+
Mm9::chr5:88123999..88124036,-p@chr5:88123999..88124036
-
Mm9::chr5:88124293..88124295,-p@chr5:88124293..88124295
-
Mm9::chr5:88125078..88125099,-p@chr5:88125078..88125099
-
Mm9::chr5:88125200..88125204,-p@chr5:88125200..88125204
-
Mm9::chr5:88126164..88126171,-p@chr5:88126164..88126171
-
Mm9::chr5:88126190..88126195,-p@chr5:88126190..88126195
-
Mm9::chr5:88126303..88126323,-p@chr5:88126303..88126323
-
Mm9::chr5:88127079..88127081,-p@chr5:88127079..88127081
-
Mm9::chr5:88127086..88127117,-p@chr5:88127086..88127117
-
Mm9::chr5:88128439..88128452,-p1@Csn2
Mm9::chr5:88203577..88203598,+p1@Csn1s2a
Mm9::chr5:88203952..88203961,+p@chr5:88203952..88203961
+
Mm9::chr5:88204324..88204334,+p@chr5:88204324..88204334
+
Mm9::chr5:88204791..88204807,+p@chr5:88204791..88204807
+
Mm9::chr5:88204809..88204827,+p@chr5:88204809..88204827
+
Mm9::chr5:88204836..88204843,+p@chr5:88204836..88204843
+
Mm9::chr5:88206236..88206252,+p@chr5:88206236..88206252
+
Mm9::chr5:88206460..88206469,+p@chr5:88206460..88206469
+
Mm9::chr5:88207077..88207084,+p@chr5:88207077..88207084
+
Mm9::chr5:88207188..88207211,+p@chr5:88207188..88207211
+
Mm9::chr5:88207974..88207986,+p@chr5:88207974..88207986
+
Mm9::chr5:88209021..88209051,+p@chr5:88209021..88209051
+
Mm9::chr5:88209047..88209050,-p@chr5:88209047..88209050
-
Mm9::chr5:88209128..88209157,+p@chr5:88209128..88209157
+
Mm9::chr5:88209161..88209183,-p@chr5:88209161..88209183
-
Mm9::chr5:88209177..88209180,+p@chr5:88209177..88209180
+
Mm9::chr5:88209981..88209984,+p@chr5:88209981..88209984
+
Mm9::chr5:88210806..88210830,+p@chr5:88210806..88210830
+
Mm9::chr5:88210832..88210837,+p@chr5:88210832..88210837
+
Mm9::chr5:88210841..88210848,+p@chr5:88210841..88210848
+
Mm9::chr5:88210852..88210888,+p@chr5:88210852..88210888
+
Mm9::chr5:88210863..88210879,-p@chr5:88210863..88210879
-
Mm9::chr5:88210886..88210920,-p@chr5:88210886..88210920
-
Mm9::chr5:88213564..88213565,+p@chr5:88213564..88213565
+
Mm9::chr5:88213579..88213594,+p@chr5:88213579..88213594
+
Mm9::chr5:88213608..88213623,-p@chr5:88213608..88213623
-
Mm9::chr5:88214300..88214314,+p@chr5:88214300..88214314
+
Mm9::chr5:88214331..88214347,-p@chr5:88214331..88214347
-
Mm9::chr5:88215607..88215628,+p@chr5:88215607..88215628
+
Mm9::chr5:88215632..88215662,+p@chr5:88215632..88215662
+
Mm9::chr5:88215650..88215658,-p@chr5:88215650..88215658
-
Mm9::chr5:88215663..88215674,+p@chr5:88215663..88215674
+
Mm9::chr5:88215676..88215679,+p@chr5:88215676..88215679
+
Mm9::chr5:88215680..88215714,-p@chr5:88215680..88215714
-
Mm9::chr5:88215700..88215705,+p@chr5:88215700..88215705
+
Mm9::chr5:88217569..88217586,+p@chr5:88217569..88217586
+
Mm9::chr5:88217642..88217646,-p@chr5:88217642..88217646
-
Mm9::chr5:88217649..88217662,-p@chr5:88217649..88217662
-
Mm9::chr5:88217757..88217772,+p@chr5:88217757..88217772
+
Mm9::chr5:88217783..88217793,+p@chr5:88217783..88217793
+
Mm9::chr5:88237142..88237153,+p1@Csn1s2b
Mm9::chr5:88240375..88240378,+p@chr5:88240375..88240378
+
Mm9::chr5:88354619..88354646,+p1@Csn3
Mm9::chr5:88354649..88354664,+p2@Csn3
Mm9::chr5:88356056..88356074,+p@chr5:88356056..88356074
+
Mm9::chr5:88356595..88356616,+p3@Csn3
Mm9::chr5:88357286..88357299,+p4@Csn3
Mm9::chr5:88358753..88358764,+p@chr5:88358753..88358764
+
Mm9::chr5:88358781..88358799,+p@chr5:88358781..88358799
+
Mm9::chr5:88358825..88358828,+p@chr5:88358825..88358828
+
Mm9::chr5:88358835..88358840,+p@chr5:88358835..88358840
+
Mm9::chr5:88358854..88358874,+p@chr5:88358854..88358874
+
Mm9::chr5:88358878..88358890,+p@chr5:88358878..88358890
+
Mm9::chr5:88358889..88358911,-p@chr5:88358889..88358911
-
Mm9::chr5:88358893..88358897,+p@chr5:88358893..88358897
+
Mm9::chr5:88358899..88358903,+p@chr5:88358899..88358903
+
Mm9::chr5:88358910..88358931,+p@chr5:88358910..88358931
+
Mm9::chr5:88358934..88358941,+p@chr5:88358934..88358941
+
Mm9::chr5:88358947..88358973,+p@chr5:88358947..88358973
+
Mm9::chr5:88358983..88358986,+p@chr5:88358983..88358986
+
Mm9::chr5:88358988..88358999,-p@chr5:88358988..88358999
-
Mm9::chr5:88359009..88359014,-p@chr5:88359009..88359014
-
Mm9::chr5:88359054..88359083,-p@chr5:88359054..88359083
-
Mm9::chr5:88359113..88359133,-p@chr5:88359113..88359133
-
Mm9::chr5:88361470..88361479,+p@chr5:88361470..88361479
+
Mm9::chr6:104295805..104295814,+p@chr6:104295805..104295814
+
Mm9::chr6:112439813..112439822,-p5@Oxtr
Mm9::chr6:113860440..113860445,-p22@Atp2b2
Mm9::chr6:113860465..113860478,-p4@Atp2b2
Mm9::chr6:113860479..113860491,-p7@Atp2b2
Mm9::chr6:113860537..113860546,-p13@Atp2b2
Mm9::chr6:113860572..113860579,-p12@Atp2b2
Mm9::chr6:113884673..113884689,-p5@Atp2b2
Mm9::chr6:137412973..137412974,+p@chr6:137412973..137412974
+
Mm9::chr6:24162312..24162345,-p@chr6:24162312..24162345
-
Mm9::chr6:35361971..35361978,+p@chr6:35361971..35361978
+
Mm9::chr7:107154528..107154533,+p3@Chrdl2
Mm9::chr7:107154544..107154574,+p2@Chrdl2
Mm9::chr7:107154576..107154595,+p1@Chrdl2
Mm9::chr7:109012295..109012307,+p@chr7:109012295..109012307
+
Mm9::chr7:109012607..109012670,-p2@Folr1
Mm9::chr7:109012674..109012682,-p20@Folr1
Mm9::chr7:109210996..109211006,-p@chr7:109210996..109211006
-
Mm9::chr7:112544693..112544699,-p@chr7:112544693..112544699
-
Mm9::chr7:112544726..112544738,-p@chr7:112544726..112544738
-
Mm9::chr7:112544745..112544756,-p@chr7:112544745..112544756
-
Mm9::chr7:132635914..132635920,-p@chr7:132635914..132635920
-
Mm9::chr7:30017470..30017490,-p@chr7:30017470..30017490
-
Mm9::chr7:35963309..35963311,-p@chr7:35963309..35963311
-
Mm9::chr7:4080777..4080788,+p7@Ttyh1
Mm9::chr7:75913214..75913218,-p@chr7:75913214..75913218
-
Mm9::chr8:122223917..122223962,+p1@Atp2c2
Mm9::chr8:24301650..24301670,-p@chr8:24301650..24301670
-
Mm9::chr8:39536780..39536784,-p@chr8:39536780..39536784
-
Mm9::chr8:52461156..52461158,+p@chr8:52461156..52461158
+
Mm9::chr8:67022646..67022651,+p@chr8:67022646..67022651
+
Mm9::chr8:69495848..69495849,-p@chr8:69495848..69495849
-
Mm9::chr8:71376494..71376503,-p@chr8:71376494..71376503
-
Mm9::chr8:74304491..74304500,+p@chr8:74304491..74304500
+
Mm9::chr8:8021158..8021161,-p@chr8:8021158..8021161
-
Mm9::chr8:98629001..98629006,+p@chr8:98629001..98629006
+
Mm9::chr9:103132745..103132760,-p13@Trf
Mm9::chr9:107419666..107419669,-p@chr9:107419666..107419669
-
Mm9::chr9:107483631..107483643,+p4@Hyal3
Mm9::chr9:34863243..34863254,-p@chr9:34863243..34863254
-
Mm9::chr9:35777103..35777107,-p@chr9:35777103..35777107
-
Mm9::chr9:47431371..47431374,+p@chr9:47431371..47431374
+
Mm9::chr9:55158428..55158429,+p@chr9:55158428..55158429
+
Mm9::chr9:60519767..60519772,+p@chr9:60519767..60519772
+
Mm9::chr9:65036670..65036671,+p@chr9:65036670..65036671
+
Mm9::chr9:68417059..68417064,-p@chr9:68417059..68417064
-
Mm9::chrX:158813399..158813404,-p@chrX:158813399..158813404
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0006810transport2.35252618387158e-06
GO:0051234establishment of localization2.72945389052599e-06
GO:0051179localization6.25990538970619e-05
GO:0005988lactose metabolic process0.00103749092956346
GO:0046351disaccharide biosynthetic process0.00103749092956346
GO:0005989lactose biosynthetic process0.00103749092956346
GO:0007595lactation0.00108201299969242
GO:0022857transmembrane transporter activity0.00165959695027517
GO:0045136development of secondary sexual characteristics0.0016946117554734
GO:0005984disaccharide metabolic process0.0016946117554734
GO:0004461lactose synthase activity0.0016946117554734
GO:0022804active transmembrane transporter activity0.00191021098707246
GO:0030879mammary gland development0.00194436123413886
GO:0048609reproductive process in a multicellular organism0.00257607964279661
GO:0032504multicellular organism reproduction0.00257607964279661
GO:0005615extracellular space0.00339931704540711
GO:0030855epithelial cell differentiation0.0067022668040256
GO:0002064epithelial cell development0.00719638305535339
GO:0044421extracellular region part0.00784392583037299
GO:0008180signalosome0.0108614200215987
GO:0022414reproductive process0.0108614200215987
GO:0006812cation transport0.0108614200215987
GO:0006811ion transport0.0239605402974435
GO:0030001metal ion transport0.0261333147095886
GO:0022891substrate-specific transmembrane transporter activity0.0270278510339958
GO:0022892substrate-specific transporter activity0.0283756944341974
GO:0035250UDP-galactosyltransferase activity0.034232902800599
GO:0048732gland development0.034232902800599
GO:0015291secondary active transmembrane transporter activity0.0405054212757056
GO:0015075ion transmembrane transporter activity0.0405054212757056
GO:0003836beta-galactoside alpha-2,3-sialyltransferase activity0.0405054212757056
GO:0031527filopodium membrane0.0405054212757056
GO:0032433filopodium tip0.0405054212757056
GO:0006494protein amino acid terminal glycosylation0.0405054212757056
GO:0005345purine transmembrane transporter activity0.0405054212757056
GO:0045299otolith mineralization0.0405054212757056
GO:0006496protein amino acid terminal N-glycosylation0.0405054212757056
GO:0042360vitamin E metabolic process0.0405054212757056
GO:0060055angiogenesis involved in wound healing0.0405054212757056
GO:0002067glandular epithelial cell differentiation0.0405054212757056
GO:0060057apoptosis involved in mammary gland involution0.0405054212757056
GO:0042392sphingosine-1-phosphate phosphatase activity0.0405054212757056
GO:0060058positive regulation of apoptosis involved in mammary gland involution0.0405054212757056
GO:0008431vitamin E binding0.0405054212757056
GO:0060054positive regulation of epithelial cell proliferation involved in wound healing0.0405054212757056
GO:0015864pyrimidine nucleoside transport0.0405054212757056
GO:0046655folic acid metabolic process0.0405054212757056
GO:0015389pyrimidine- and adenine-specific:sodium symporter activity0.0405054212757056
GO:0015390purine-specific nucleoside:sodium symporter activity0.0405054212757056
GO:0060046regulation of acrosome reaction0.0405054212757056
GO:0008780acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity0.0405054212757056
GO:0002068glandular epithelial cell development0.0405054212757056
GO:0008778acyl-CoA thioesterase II activity0.0405054212757056
GO:0002071glandular epithelial cell maturation0.0405054212757056
GO:0002069columnar/cuboidal epithelial cell maturation0.0405054212757056
GO:0008378galactosyltransferase activity0.042962597152541
GO:0032787monocarboxylic acid metabolic process0.0432121808003774
GO:0019842vitamin binding0.0449189028486131



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
mammary gland1.87e-862
external ectoderm1.87e-862
mammary bud1.87e-862
mammary ridge1.87e-862
mammary placode1.87e-862
female organism5.67e-1711
ectodermal placode1.42e-1413
epithelial bud1.86e-1117
epithelial fold6.23e-1020
exocrine gland3.41e-0825
exocrine system3.41e-0825


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.10
MA0004.16.38038e-06
MA0006.11.95901e-08
MA0007.10.056473
MA0009.11.28326
MA0014.10
MA0017.10.148835
MA0019.11.0219
MA0024.10.00718103
MA0025.10.97638
MA0027.10.865907
MA0028.11.20901e-08
MA0029.10.509259
MA0030.10.0885816
MA0031.10.2825
MA0038.10.501014
MA0040.13.18103
MA0041.10.889159
MA0042.10.109533
MA0043.10.192485
MA0046.10.342492
MA0048.14.85773e-10
MA0050.10.0106081
MA0051.10.00474648
MA0052.13.72077
MA0055.14.23939e-09
MA0056.10
MA0057.12.05746e-07
MA0058.15.28787e-06
MA0059.10.00727805
MA0060.11.40092e-06
MA0061.10.000102306
MA0063.10
MA0066.10.341701
MA0067.10.0214997
MA0068.16.65427e-10
MA0069.10.102657
MA0070.12.00072
MA0071.10.07938
MA0072.10.408863
MA0073.10
MA0074.10.48761
MA0076.18.14804e-06
MA0077.10.506199
MA0078.12.03626
MA0081.11.73157
MA0083.10.501523
MA0084.11.84491
MA0087.12.36667
MA0088.11.2566e-08
MA0089.10
MA0090.10.96305
MA0091.12.18883
MA0092.10.405244
MA0093.11.00096e-07
MA0095.10
MA0098.10
MA0100.10.000721341
MA0101.10.0166984
MA0103.10.809734
MA0105.14.66681e-12
MA0106.10.0802009
MA0107.10.0170214
MA0108.20.775566
MA0109.10
MA0111.10.0199411
MA0113.11.78938
MA0114.10.340358
MA0115.10.100372
MA0116.10.000774513
MA0117.10.0297623
MA0119.10.0170236
MA0122.10.179158
MA0124.12.05079
MA0125.11.60667
MA0130.10
MA0131.10.00187255
MA0132.10
MA0133.10
MA0135.19.74241
MA0136.10.28129
MA0139.12.81118e-05
MA0140.10.0332465
MA0141.10.110849
MA0142.11.59651
MA0143.11.98597
MA0144.15.29527
MA0145.11.11139e-05
MA0146.14.64806e-14
MA0147.17.9196e-07
MA0148.10.654889
MA0149.17.26241e-05
MA0062.29.14954e-13
MA0035.20.195156
MA0039.20
MA0138.20.0548809
MA0002.20.0772462
MA0137.23.20714
MA0104.21.14128e-07
MA0047.20.775186
MA0112.21.09408e-08
MA0065.26.99265e-06
MA0150.10.21265
MA0151.10
MA0152.10.497624
MA0153.10.934034
MA0154.10.000705805
MA0155.19.54874e-06
MA0156.10.141129
MA0157.11.33121
MA0158.10
MA0159.10.321217
MA0160.10.365095
MA0161.10
MA0162.10
MA0163.10
MA0164.10.206491
MA0080.20.327221
MA0018.20.000872479
MA0099.20.0499566
MA0079.20
MA0102.20.14843
MA0258.10.00210655
MA0259.13.01038e-08
MA0442.10
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