NonredundantMotifs:135

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known135
• db :HOMER
• Id :DMC1_Testis-DMC1-ChIP-Seq
• name  :
• score :0.04359854958293119
  
• External refs:

EntrezGene:11144
UniProt:11144

• Internal refs:

EntrezGene:11144

Motif matrix
PO A C G T 1 674 152 320 252 2 359 748 123 168 3 150 358 1 889 4 50 737 77 534 5 315 218 333 532 6 463 401 275 259 7 945 112 226 115 8 52 204 439 703 9 7 14 8 1369 10 13 857 1 527 11 278 238 612 270 12 446 1 80 871 13 1 1 1395 1 14 296 380 366 356 15 42 74 25 1257 16 782 36 520 60 17 11 1348 3 36 18 45 105 1 1247 19 42 99 42 1215 20 350 596 84 368