NonredundantMotifs:31: Difference between revisions
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;157.87160150624615;509.80880259053333;122.15675650628955;358.001415437191!2;63.073280527400975;232.630134580975;338.14257040863646;513.9925905232477!3;58.624000820825955;755.3575218127127;194.23083090156493;139.62622250515727!4;13.4023460548972;340.19051694141666;52.50671467995065;741.7389983639963!5;47.39152284369253;384.3920770616204;656.4566098883835;59.59836624656405!6;1131.364549114232;6.7639231456988;5.2873780575452995;4.422725722785539!7;0.08780686291924575;3.49541559908934;9.370578870810904;1134.8847747074424!8;0.5984915776575795;0.0;7.319564974251791;1139.9205194883518!9;1.4870970304003526;6.819965116732662;1138.1757759296559;1.3557379634731586!10;1.344498685019489;5.498886634723806;1140.195797040502;0.7993936800168141!11;100.73697462046164;653.626812695205;53.68240011566178;339.79238860893236!12;30.42649505891509;412.0353275518192;45.59179396742379;659.7849594621015!13;288.23995729805307;184.34140269752672;530.7455149871171;144.51170105756432 | |||
|entrez_gene_id=4801 | |entrez_gene_id=4801 | ||
|motif_cluster_2013_march_motif_members= /JASPAR:MA0060.1;NFYA /HOCOMOCO:NFYA_f1~FOS_si~YBOX1_f2~NFYC_f1~NFYB_f1~CEBPZ_si~FOXI1_f1~ | |motif_cluster_2013_march_motif_members= /SWISSREGULON:NFY(A,B,C).p2 /JASPAR:MA0060.1;NFYA /UNIPROBE:Duxl_1286.2;CELL08 /HOCOMOCO:NFYA_f1~FOS_si~YBOX1_f2~NFYC_f1~NFYB_f1~CEBPZ_si~FOXI1_f1~PBX3_f2 | ||
|name=known31 | |name=known31 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
Revision as of 10:46, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known31
- db :HOCOMOCO
- Id :NFYB_f1
- name :
- score :0.7417708537241554
- External refs:
- Internal refs:
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Sub Motif Members
