NonredundantMotifs:1

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant1
• db :UNIPROBE
• Id :Lhx8_2247.2
• name :CELL08
• score :0.1453959787096941
  
• External refs:

EntrezGene:431707
UniProt:431707

• Internal refs:

EntrezGene:431707

Motif matrix

P0 A C G T 1 0.381182074077313 0.203862617947413 0.13841947155087 0.276535836424404 2 0.273031517766875 0.44308553701601 0.157555355407916 0.126327589809199 3 0.33224501940196 0.358200499510754 0.167186995181582 0.142367485905704 4 0.288841183465351 0.389155704916314 0.252731598918779 0.0692715126995555 5 0.0597141160980617 0.852528844152906 0.0493743427221523 0.0383826970268805 6 0.00587629913745692 0.170371181244601 0.000609742794052837 0.823142776823889 7 0.857805787879249 0.0141196542143549 0.127763468715177 0.000311089191218342 8 0.983730310862334 0.00411135350853914 0.010338433054583 0.0018199025745441 9 0.0018199025745441 0.010338433054583 0.00411135350853914 0.983730310862334 10 0.000311089191218342 0.127763468715177 0.0141196542143549 0.857805787879249 11 0.823142776823889 0.000609742794052837 0.170371181244601 0.00587629913745692 12 0.0383826970268805 0.0493743427221523 0.852528844152906 0.0597141160980617 13 0.0227290466467234 0.729172770918343 0.0902000164702183 0.157898165964715 14 0.139767918745641 0.120743907182898 0.49247255365105 0.247015620420411 15 0.148964144182527 0.118691809049481 0.499320463437805 0.233023583330187 16 0.0763163315164499 0.185770198362129 0.195891743611199 0.542021726510222 17 0.18103824535373 0.136131856938946 0.512805403021513 0.170024494685811