NonredundantMotifs:91

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant91
• db :UNIPROBE
• Id :Rfx3_secondary
• name :SCI09
• score :0.11922538800456256
  
• External refs:

EntrezGene:5991
UniProt:5991

• Internal refs:

EntrezGene:5991

Motif matrix

P0 A C G T 1 0.314513906043393 0.275351986696445 0.257616604464868 0.152517502795295 2 0.126938740270949 0.598294124188177 0.130575622432586 0.144191513108288 3 0.102264501274458 0.155333658678012 0.177956876587744 0.564444963459786 4 0.129288281532144 0.282677986963689 0.326989810522106 0.261043920982061 5 0.318165762969654 0.22782297902013 0.17568085845375 0.278330399556466 6 0.109019256525864 0.38083805723801 0.27832750757358 0.231815178662545 7 0.226145422193051 0.289206322628084 0.291300351993752 0.193347903185114 8 0.0358628968725205 0.844339405858352 0.0725818738688831 0.047215823400244 9 0.223792603436246 0.187243542641412 0.088092458558075 0.500871395364267 10 0.0398002170289902 0.029681404606728 0.0262011632797152 0.904317215084567 11 0.298298115892507 0.0321473955389188 0.654745851794634 0.0148086367739403 12 0.0147289622653183 0.0220233226585366 0.944825901859478 0.0184218132166674 13 0.485114359210143 0.0049249070130092 0.0137845742829862 0.496176159493862 14 0.0357075048270461 0.0203809715130823 0.240803698671853 0.703107824988019 15 0.951151624876946 0.012738033130385 0.0178860810622747 0.0182242609303939 16 0.0237133976469831 0.944393882508612 0.0095377104705711 0.0223550093738339 17 0.291066851174228 0.385205445176838 0.232388435054478 0.0913392685944557 18 0.340333997680923 0.199588034706489 0.311525697304929 0.148552270307658 19 0.198713320913973 0.47213824347238 0.178318679551308 0.15082975606234 20 0.321155300689425 0.269931579233006 0.311301046952266 0.0976120731253035 21 0.412645779419669 0.195251529090451 0.231950327551075 0.160152363938805 22 0.297134124348331 0.180928100035569 0.250399684910501 0.271538090705599 23 0.151169100606394 0.305385869807582 0.358573590337954 0.18487143924807